FFCP PHASE1:Hg19::chr1:153599367..153599374,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:153599367..153599374,-
|short_description=p26@S100A13
|description=CAGE_peak_26_at_S100A13_5end
|association_with_transcript=-358bp_to_BC000632_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6284 | |EntrezGene=6284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10490 | |HGNC=10490 | ||
|TSSclassifier=strong | |||
|UniProt=Q99584 | |UniProt=Q99584 | ||
|association_with_transcript=-358bp_to_BC000632_5end | |||
|cluster_id=chr1:153599367..153599374,- | |||
|description=CAGE_peak_26_at_S100A13_5end | |||
|id=chr1:153599367..153599374,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;3.81e-21;1!CL:0002625;3.81e-21;1!CL:0000216;3.81e-21;1!CL:0000650;2.87e-11;2!CL:1000500;2.87e-11;2!CL:1000618;2.87e-11;2!CL:1001318;2.87e-11;2!CL:0002173;2.87e-11;2!CL:0002593;2.87e-11;2!CL:1000507;6.53e-09;10!CL:1000494;6.53e-09;10!CL:0002615;6.13e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.88e-21,1;CL:0002625,1.88e-21,1;CL:0000216,1.88e-21,1;CL:0002593,3.35e-11,2;CL:0000650,4.09e-11,2;CL:1000500,4.09e-11,2;CL:1000618,4.09e-11,2;CL:1001318,4.09e-11,2;CL:0002173,4.09e-11,2;CL:1000507,7.07e-09,10;CL:1000494,7.07e-09,10;CL:0002615,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;7.50e-17;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;2.87e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,3.02e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000475!7.11e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;3.81e-21;1!UBERON:0001343;3.81e-21;1!UBERON:0004910;3.81e-21;1!UBERON:0004813;3.81e-21;1!UBERON:0002046;7.50e-17;5!UBERON:0003567;2.87e-11;2!UBERON:0003838;2.87e-11;2!UBERON:0003586;2.87e-11;2!UBERON:0004909;2.87e-11;2!UBERON:0005169;2.87e-11;2!UBERON:0002321;2.87e-11;2!UBERON:0002456;2.87e-11;2!UBERON:0005215;2.87e-11;2!UBERON:0002303;2.87e-11;2!UBERON:0002319;2.87e-11;2!UBERON:0004211;6.53e-09;10!UBERON:0009773;6.53e-09;10!UBERON:0001231;6.53e-09;10!UBERON:0004810;6.53e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.88e-21,1;UBERON:0001343,1.88e-21,1;UBERON:0004910,1.88e-21,1;UBERON:0005154,1.88e-21,1;UBERON:0005295,1.88e-21,1;UBERON:0004813,1.88e-21,1;UBERON:0005297,1.88e-21,1;UBERON:0005294,1.88e-21,1;UBERON:0010141,1.88e-21,1;UBERON:0005891,1.88e-21,1;UBERON:0002046,5.03e-17,5;UBERON:0004117,5.03e-17,5;UBERON:0007689,5.03e-17,5;UBERON:0007123,5.03e-17,5;UBERON:0003091,5.03e-17,5;UBERON:0004909,2.02e-11,2;UBERON:0002456,3.35e-11,2;UBERON:0003567,4.09e-11,2;UBERON:0003838,4.09e-11,2;UBERON:0003586,4.09e-11,2;UBERON:0005169,4.09e-11,2;UBERON:0002321,4.09e-11,2;UBERON:0005215,4.09e-11,2;UBERON:0002303,4.09e-11,2;UBERON:0002319,4.09e-11,2;UBERON:0004810,7.07e-09,10;UBERON:0009722,2.92e-08,11;UBERON:0007690,2.92e-08,11;UBERON:0004876,3.50e-08,11 | |||
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| ||
|short_description=p26@S100A13 | |||
}} | }} |
Latest revision as of 06:36, 17 September 2015
Short description: | p26@S100A13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_S100A13_5end |
Coexpression cluster: | NA |
Association with transcript: | -358bp_to_BC000632_5end |
EntrezGene: | S100A13 |
HGNC: | 10490 |
UniProt: | Q99584 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.88e-21 | 1 |
seminiferous tubule epithelial cell | 1.88e-21 | 1 |
Sertoli cell | 1.88e-21 | 1 |
smooth muscle cell of the internal thoracic artery | 3.35e-11 | 2 |
mesangial cell | 4.09e-11 | 2 |
kidney interstitial cell | 4.09e-11 | 2 |
juxtaglomerular complex cell | 4.09e-11 | 2 |
renal interstitial pericyte | 4.09e-11 | 2 |
extraglomerular mesangial cell | 4.09e-11 | 2 |
kidney tubule cell | 7.07e-09 | 10 |
nephron tubule epithelial cell | 7.07e-09 | 10 |
adipocyte of omentum tissue | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.88e-21 | 1 |
seminiferous tubule of testis | 1.88e-21 | 1 |
epithelium of male gonad | 1.88e-21 | 1 |
epithelial cord | 1.88e-21 | 1 |
sex cord | 1.88e-21 | 1 |
seminiferous tubule epithelium | 1.88e-21 | 1 |
testis sex cord | 1.88e-21 | 1 |
genital ridge | 1.88e-21 | 1 |
primitive sex cord of indifferent gonad | 1.88e-21 | 1 |
coelomic epithelium | 1.88e-21 | 1 |
thyroid gland | 5.03e-17 | 5 |
pharyngeal pouch | 5.03e-17 | 5 |
thyroid diverticulum | 5.03e-17 | 5 |
pharyngeal pouch 2 | 5.03e-17 | 5 |
thyroid primordium | 5.03e-17 | 5 |
epithelium of gonad | 2.02e-11 | 2 |
internal thoracic artery | 3.35e-11 | 2 |
abdomen connective tissue | 4.09e-11 | 2 |
abdominal segment connective tissue | 4.09e-11 | 2 |
trunk connective tissue | 4.09e-11 | 2 |
interstitial tissue | 4.09e-11 | 2 |
extraglomerular mesangium | 4.09e-11 | 2 |
kidney interstitium | 4.09e-11 | 2 |
juxtaglomerular apparatus | 4.09e-11 | 2 |
mesangium | 4.09e-11 | 2 |
nephron tubule epithelium | 7.07e-09 | 10 |
entire pharyngeal arch endoderm | 2.92e-08 | 11 |
early pharyngeal endoderm | 2.92e-08 | 11 |
urogenital ridge | 3.50e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 3.02e-11 | 2 |