FFCP PHASE1:Hg19::chr10:97416400..97416512,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5832 | |EntrezGene=5832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9722 | |HGNC=9722 | ||
|TSSclassifier=strong | |||
|UniProt=P54886 | |UniProt=P54886 | ||
|association_with_transcript=0bp_to_ENST00000371221,ENST00000371224_5end | |association_with_transcript=0bp_to_ENST00000371221,ENST00000371224_5end | ||
|cluster_id=chr10:97416400..97416512,- | |||
|description=CAGE_peak_1_at_ALDH18A1_5end | |description=CAGE_peak_1_at_ALDH18A1_5end | ||
|id=chr10:97416400..97416512,- | |id=chr10:97416400..97416512,- | ||
|ontology_enrichment_celltype=CL:0000359;3.00e-12;32!CL:0000192;3.72e-10;43!CL:0000187;2.12e-08;55!CL:0000499;1.96e-07;28!CL:0000393;2.48e-07;61!CL:0000211;2.48e-07;61!CL:0000057;4.57e-07;73 | |ontology_enrichment_celltype=CL:0000055!2.56e-32!180;CL:0000548!2.45e-16!679;CL:0000004!2.45e-16!679;CL:0000255!2.45e-16!679;CL:0000012!4.33e-16!682;CL:0002321!8.10e-16!248;CL:0000680!1.24e-15!57;CL:0000056!1.24e-15!57;CL:0000355!1.24e-15!57;CL:0000183!1.26e-15!59;CL:0000220!1.93e-15!246;CL:0000187!4.00e-15!54;CL:0000057!5.11e-15!75;CL:0000192!7.66e-15!42;CL:0000514!7.66e-15!42;CL:0000144!3.17e-14!625;CL:0000393!5.74e-14!60;CL:0000211!5.74e-14!60;CL:0000222!1.75e-13!119;CL:0000359!4.35e-13!32;CL:0002371!2.17e-12!591;CL:0000499!2.75e-07!27;CL:0000003!5.59e-07!722 | ||
| | |ontology_enrichment_celltype_v019=CL:0000359;3.00e-12;32!CL:0000192;3.72e-10;43!CL:0000187;2.12e-08;55!CL:0000499;1.96e-07;28!CL:0000393;2.48e-07;61!CL:0000211;2.48e-07;61!CL:0000057;4.57e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.25e-15,250;CL:0000057,3.62e-15,76;CL:0000680,4.08e-15,58;CL:0000056,4.08e-15,58;CL:0000355,4.08e-15,58;CL:0000187,1.34e-14,55;CL:0000192,3.18e-14,43;CL:0000514,3.18e-14,43;CL:0000393,1.64e-13,61;CL:0000211,1.64e-13,61;CL:0000222,3.57e-13,121;CL:0000359,4.34e-13,32;CL:0000499,2.05e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;3.72e-10;43!CL:0000355;2.61e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004573;2.01e-09;33!UBERON:0004571;2.01e-09;33!UBERON:0001637;3.34e-09;42!UBERON:0003509;3.34e-09;42!UBERON:0004572;3.34e-09;42!UBERON:0007500;6.94e-07;56!UBERON:0001981;6.94e-07;56!UBERON:0004537;6.94e-07;56 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!3.60e-15!138;UBERON:0005256!7.54e-15!143;UBERON:0004290!3.57e-14!70;UBERON:0000914!1.14e-13!83;UBERON:0002329!1.14e-13!83;UBERON:0003077!1.14e-13!83;UBERON:0003059!1.14e-13!83;UBERON:0007282!1.14e-13!83;UBERON:0009618!1.14e-13!83;UBERON:0007285!1.14e-13!83;UBERON:0002049!1.24e-13!79;UBERON:0007798!1.24e-13!79;UBERON:0001134!4.12e-13!61;UBERON:0002036!4.12e-13!61;UBERON:0003082!4.12e-13!61;UBERON:0002385!4.81e-13!63;UBERON:0001015!4.81e-13!63;UBERON:0000383!4.81e-13!63;UBERON:0000486!6.13e-13!82;UBERON:0002100!1.79e-12!216;UBERON:0001637!2.53e-12!42;UBERON:0003509!2.53e-12!42;UBERON:0004572!2.53e-12!42;UBERON:0003104!5.33e-12!238;UBERON:0009142!5.33e-12!238;UBERON:0003914!7.44e-12!118;UBERON:0000055!1.26e-10!69;UBERON:0004573!1.80e-10!33;UBERON:0004571!1.80e-10!33;UBERON:0001981!3.26e-10!60;UBERON:0007500!3.26e-10!60;UBERON:0004537!3.26e-10!60;UBERON:0006965!3.26e-10!60;UBERON:0004872!5.12e-10!84;UBERON:0000475!6.86e-10!365;UBERON:0000481!1.00e-08!347;UBERON:0003102!1.86e-07!95;UBERON:0004535!3.18e-07!110;UBERON:0002199!7.60e-07!45;UBERON:0002416!7.60e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.01e-09;33!UBERON:0004571;2.01e-09;33!UBERON:0001637;3.34e-09;42!UBERON:0003509;3.34e-09;42!UBERON:0004572;3.34e-09;42!UBERON:0007500;6.94e-07;56!UBERON:0001981;6.94e-07;56!UBERON:0004537;6.94e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,7.20e-17,160;UBERON:0009142,7.20e-17,160;UBERON:0000490,3.91e-16,148;UBERON:0005256,2.87e-14,122;UBERON:0007503,8.23e-14,78;UBERON:0002329,9.78e-14,71;UBERON:0003059,9.78e-14,71;UBERON:0007282,9.78e-14,71;UBERON:0004290,9.78e-14,71;UBERON:0009618,9.78e-14,71;UBERON:0007524,1.52e-13,73;UBERON:0002049,1.75e-13,78;UBERON:0007798,1.75e-13,78;UBERON:0003077,4.25e-13,72;UBERON:0007285,4.25e-13,72;UBERON:0002100,8.94e-13,199;UBERON:0001134,1.17e-12,62;UBERON:0002036,1.17e-12,62;UBERON:0003082,1.17e-12,62;UBERON:0002385,1.33e-12,64;UBERON:0001015,1.33e-12,64;UBERON:0000383,1.33e-12,64;UBERON:0000486,1.43e-12,83;UBERON:0001637,2.52e-12,42;UBERON:0003509,2.52e-12,42;UBERON:0004572,2.52e-12,42;UBERON:0003914,4.05e-12,117;UBERON:0000055,1.75e-10,68;UBERON:0004573,1.79e-10,33;UBERON:0004571,1.79e-10,33;UBERON:0007500,4.53e-10,59;UBERON:0001981,4.53e-10,59;UBERON:0004537,4.53e-10,59;UBERON:0006965,4.53e-10,59;UBERON:0004872,7.13e-10,83;UBERON:0003102,2.28e-07,99;UBERON:0004535,4.25e-07,109;UBERON:0002199,5.39e-07,46;UBERON:0002416,5.39e-07,46;UBERON:0000119,6.03e-07,309 | |||
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| ||
|short_description=p1@ALDH18A1 | |short_description=p1@ALDH18A1 | ||
}} | }} |
Latest revision as of 03:58, 20 September 2015
Short description: | p1@ALDH18A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALDH18A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000371221, ENST00000371224_5end |
EntrezGene: | ALDH18A1 |
HGNC: | 9722 |
UniProt: | P54886 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.25e-15 | 250 |
fibroblast | 3.62e-15 | 76 |
muscle precursor cell | 4.08e-15 | 58 |
myoblast | 4.08e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.08e-15 | 58 |
muscle cell | 1.34e-14 | 55 |
smooth muscle cell | 3.18e-14 | 43 |
smooth muscle myoblast | 3.18e-14 | 43 |
electrically responsive cell | 1.64e-13 | 61 |
electrically active cell | 1.64e-13 | 61 |
mesodermal cell | 3.57e-13 | 121 |
vascular associated smooth muscle cell | 4.34e-13 | 32 |
stromal cell | 2.05e-07 | 28 |