FFCP PHASE1:Hg19::chr11:114271314..114271365,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10179 | |EntrezGene=10179 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9904 | |HGNC=9904 | ||
|TSSclassifier=strong | |||
|UniProt=F5GXV8,F5H674 | |UniProt=F5GXV8,F5H674 | ||
|association_with_transcript=0bp_to_ENST00000541475,ENST00000544313_5end | |association_with_transcript=0bp_to_ENST00000541475,ENST00000544313_5end | ||
|cluster_id=chr11:114271314..114271365,+ | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_1_at_RBM7_5end | |description=CAGE_peak_1_at_RBM7_5end | ||
|id=chr11:114271314..114271365,+ | |id=chr11:114271314..114271365,+ | ||
|ontology_enrichment_celltype=CL:0000860;1.20e-20;33!CL:0002057;1.20e-20;33!CL:0000473;1.48e-18;39!CL:0000234;1.48e-18;39!CL:0000576;3.98e-18;48!CL:0000766;5.41e-16;69!CL:0000763;7.28e-09;100 | |ontology_enrichment_celltype=CL:0000766!6.24e-31!76;CL:0002057!1.93e-27!42;CL:0000839!3.08e-27!70;CL:0000763!8.05e-27!112;CL:0000049!8.05e-27!112;CL:0000557!3.15e-26!71;CL:0002009!3.13e-25!65;CL:0000860!6.47e-25!45;CL:0002194!2.15e-24!63;CL:0000576!2.15e-24!63;CL:0000040!2.15e-24!63;CL:0000559!2.15e-24!63;CL:0000738!5.96e-23!140;CL:0000037!4.24e-21!172;CL:0000566!4.24e-21!172;CL:0002032!1.20e-19!165;CL:0000837!1.20e-19!165;CL:0002031!3.06e-18!124;CL:0000988!1.33e-17!182;CL:0002087!1.58e-15!119;CL:0000134!2.58e-13!358;CL:0002320!1.37e-12!365;CL:0000723!2.56e-10!436;CL:0000048!3.69e-10!430;CL:0000034!7.73e-10!444;CL:0000219!3.74e-09!390 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.20e-20;33!CL:0002057;1.20e-20;33!CL:0000473;1.48e-18;39!CL:0000234;1.48e-18;39!CL:0000576;3.98e-18;48!CL:0000766;5.41e-16;69!CL:0000763;7.28e-09;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.88e-34,72;CL:0000839,3.61e-30,66;CL:0000557,4.85e-29,67;CL:0000473,7.23e-29,48;CL:0000234,7.23e-29,48;CL:0000763,8.00e-29,108;CL:0000049,8.00e-29,108;CL:0002009,3.66e-28,61;CL:0000860,1.93e-27,42;CL:0002057,1.93e-27,42;CL:0002194,2.53e-27,59;CL:0000576,2.53e-27,59;CL:0000040,2.53e-27,59;CL:0000559,2.53e-27,59;CL:0000738,1.81e-24,136;CL:0000037,2.45e-22,168;CL:0002032,7.33e-21,161;CL:0000837,7.33e-21,161;CL:0002031,1.21e-19,120;CL:0000988,3.53e-19,177;CL:0002087,8.15e-17,115;CL:0000134,5.87e-14,354;CL:0002320,3.32e-13,361;CL:0000723,5.32e-11,433;CL:0000048,7.74e-11,427;CL:0000034,1.68e-10,441;CL:0000219,1.19e-09,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.14e-20;42!CL:0000049;1.44e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.03e-24!102;UBERON:0003061!5.03e-24!102;UBERON:0002371!1.76e-22!80;UBERON:0002193!7.54e-22!112;UBERON:0004765!7.01e-20!101;UBERON:0001434!7.01e-20!101;UBERON:0001474!9.73e-19!86;UBERON:0002405!7.33e-12!115;UBERON:0002384!1.01e-11!375;UBERON:0002204!1.58e-11!167;UBERON:0003081!6.00e-07!216;UBERON:0007023!9.60e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.24e-26,98;UBERON:0003061,5.24e-26,98;UBERON:0002371,9.38e-25,76;UBERON:0002193,1.43e-23,108;UBERON:0001434,3.33e-21,100;UBERON:0002405,7.05e-21,93;UBERON:0004765,8.14e-21,90;UBERON:0001474,1.30e-20,82;UBERON:0002204,1.85e-12,167;UBERON:0002384,2.63e-12,371;UBERON:0003081,2.41e-09,203;UBERON:0000926,4.55e-07,315;UBERON:0004120,4.55e-07,315;UBERON:0006603,4.55e-07,315;UBERON:0007023,8.07e-07,114 | |||
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| ||
|short_description=p1@RBM7 | |short_description=p1@RBM7 | ||
}} | }} |
Latest revision as of 07:24, 25 September 2015
Short description: | p1@RBM7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RBM7_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000541475, ENST00000544313_5end |
EntrezGene: | RBM7 |
HGNC: | 9904 |
UniProt: | F5GXV8F5H674 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.88e-34 | 72 |
myeloid lineage restricted progenitor cell | 3.61e-30 | 66 |
granulocyte monocyte progenitor cell | 4.85e-29 | 67 |
defensive cell | 7.23e-29 | 48 |
phagocyte | 7.23e-29 | 48 |
myeloid cell | 8.00e-29 | 108 |
common myeloid progenitor | 8.00e-29 | 108 |
macrophage dendritic cell progenitor | 3.66e-28 | 61 |
classical monocyte | 1.93e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.93e-27 | 42 |
monopoietic cell | 2.53e-27 | 59 |
monocyte | 2.53e-27 | 59 |
monoblast | 2.53e-27 | 59 |
promonocyte | 2.53e-27 | 59 |
leukocyte | 1.81e-24 | 136 |
hematopoietic stem cell | 2.45e-22 | 168 |
hematopoietic oligopotent progenitor cell | 7.33e-21 | 161 |
hematopoietic multipotent progenitor cell | 7.33e-21 | 161 |
hematopoietic lineage restricted progenitor cell | 1.21e-19 | 120 |
hematopoietic cell | 3.53e-19 | 177 |
nongranular leukocyte | 8.15e-17 | 115 |
mesenchymal cell | 5.87e-14 | 354 |
connective tissue cell | 3.32e-13 | 361 |
somatic stem cell | 5.32e-11 | 433 |
multi fate stem cell | 7.74e-11 | 427 |
stem cell | 1.68e-10 | 441 |
motile cell | 1.19e-09 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.24e-26 | 98 |
blood island | 5.24e-26 | 98 |
bone marrow | 9.38e-25 | 76 |
hemolymphoid system | 1.43e-23 | 108 |
skeletal system | 3.33e-21 | 100 |
immune system | 7.05e-21 | 93 |
skeletal element | 8.14e-21 | 90 |
bone element | 1.30e-20 | 82 |
musculoskeletal system | 1.85e-12 | 167 |
connective tissue | 2.63e-12 | 371 |
lateral plate mesoderm | 2.41e-09 | 203 |
mesoderm | 4.55e-07 | 315 |
mesoderm-derived structure | 4.55e-07 | 315 |
presumptive mesoderm | 4.55e-07 | 315 |
adult organism | 8.07e-07 | 114 |