FFCP PHASE1:Hg19::chrX:33229636..33229651,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1756 | |EntrezGene=1756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2928 | |HGNC=2928 | ||
|TSSclassifier=strong | |||
|UniProt=P11532 | |UniProt=P11532 | ||
|association_with_transcript=0bp_to_ENST00000357033_5end | |association_with_transcript=0bp_to_ENST00000357033_5end | ||
|cluster_id=chrX:33229636..33229651,- | |||
|coexpression_cluster_id=C1113 | |coexpression_cluster_id=C1113 | ||
|description=CAGE_peak_4_at_DMD_5end | |description=CAGE_peak_4_at_DMD_5end | ||
|id=chrX:33229636..33229651,- | |id=chrX:33229636..33229651,- | ||
|ontology_enrichment_celltype=CL:0000136;2.27e-08;13 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000136;2.27e-08;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.20e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001134;1.45e-10;16!UBERON:0002036;1.45e-10;16!UBERON:0002385;2.36e-10;31!UBERON:0001015;2.36e-10;31!UBERON:0000383;2.36e-10;31!UBERON:0007023;5.92e-10;114!UBERON:0004921;1.04e-08;33 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.88e-41!115;UBERON:0002616!1.10e-13!59;UBERON:0000481!9.88e-13!347;UBERON:0001049!1.03e-12!57;UBERON:0005068!1.03e-12!57;UBERON:0006241!1.03e-12!57;UBERON:0007135!1.03e-12!57;UBERON:0003075!2.18e-12!86;UBERON:0007284!2.18e-12!86;UBERON:0002346!5.05e-11!90;UBERON:0000119!2.50e-10!312;UBERON:0000955!2.62e-10!69;UBERON:0006238!2.62e-10!69;UBERON:0001017!2.65e-10!82;UBERON:0000483!3.59e-10!309;UBERON:0002385!7.56e-10!63;UBERON:0001015!7.56e-10!63;UBERON:0000383!7.56e-10!63;UBERON:0005743!8.44e-10!86;UBERON:0000468!1.16e-09!659;UBERON:0000475!1.23e-09!365;UBERON:0000477!1.45e-09!286;UBERON:0004111!2.01e-09!241;UBERON:0003080!2.88e-09!42;UBERON:0001134!8.69e-09!61;UBERON:0002036!8.69e-09!61;UBERON:0003082!8.69e-09!61;UBERON:0002780!1.01e-08!41;UBERON:0001890!1.01e-08!41;UBERON:0006240!1.01e-08!41;UBERON:0000073!1.73e-08!94;UBERON:0001016!1.73e-08!94;UBERON:0000025!1.05e-07!194;UBERON:0000153!1.47e-07!129;UBERON:0007811!1.47e-07!129;UBERON:0000922!1.81e-07!612;UBERON:0007100!2.06e-07!27;UBERON:0002050!2.14e-07!605;UBERON:0005423!2.14e-07!605;UBERON:0000033!2.84e-07!123;UBERON:0004121!4.28e-07!169;UBERON:0000923!4.38e-07!604;UBERON:0005291!4.38e-07!604;UBERON:0006598!4.38e-07!604;UBERON:0002532!4.38e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.45e-10;16!UBERON:0002036;1.45e-10;16!UBERON:0002385;2.36e-10;31!UBERON:0001015;2.36e-10;31!UBERON:0000383;2.36e-10;31!UBERON:0007023;5.92e-10;114!UBERON:0004921;1.04e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.98e-38,114;UBERON:0011216,1.08e-08,223;UBERON:0002385,2.03e-07,64;UBERON:0001015,2.03e-07,64;UBERON:0000383,2.03e-07,64;UBERON:0001017,6.77e-07,81 | |||
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| ||
|short_description=p4@DMD | |short_description=p4@DMD | ||
}} | }} |
Latest revision as of 22:04, 24 September 2015
Short description: | p4@DMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DMD_5end |
Coexpression cluster: | C1113_heart_skeletal_smooth_bladder_penis_tongue_diaphragm |
Association with transcript: | 0bp_to_ENST00000357033_5end |
EntrezGene: | DMD |
HGNC: | 2928 |
UniProt: | P11532 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.20e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.98e-38 | 114 |
organ system subdivision | 1.08e-08 | 223 |
muscle tissue | 2.03e-07 | 64 |
musculature | 2.03e-07 | 64 |
musculature of body | 2.03e-07 | 64 |
central nervous system | 6.77e-07 | 81 |