FFCP PHASE1:Hg19::chr2:101878897..101878924,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55571 | |EntrezGene=55571 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25217 | |HGNC=25217 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENST00000462489_5end | |association_with_transcript=4bp_to_ENST00000462489_5end | ||
|cluster_id=chr2:101878897..101878924,+ | |||
|coexpression_cluster_id=C56 | |coexpression_cluster_id=C56 | ||
|description=CAGE_peak_6_at_C2orf29_5end | |description=CAGE_peak_6_at_C2orf29_5end | ||
|id=chr2:101878897..101878924,+ | |id=chr2:101878897..101878924,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:114;1.00e-13;2!DOID:1287;1.64e-07;4 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0007100;1.13e-35;25!UBERON:0004151;8.37e-34;3!UBERON:0002084;2.78e-26;1!UBERON:0002082;2.78e-26;1!UBERON:0002146;5.22e-26;1!UBERON:0005623;5.22e-26;1!UBERON:0007029;1.11e-25;1!UBERON:0002079;1.11e-25;1!UBERON:0000948;1.66e-18;22!UBERON:0002081;1.46e-13;2!UBERON:0003978;1.35e-09;3!UBERON:0000946;1.35e-09;3!UBERON:0003103;4.56e-08;61!UBERON:0000014;1.98e-07;4 | |ontology_enrichment_development_v019=UBERON:0004140;2.16e-26;1!UBERON:0010226;2.78e-26;1!UBERON:0000358;5.22e-26;1!UBERON:0010227;1.11e-25;1!UBERON:0005062;1.64e-07;4!UBERON:0007284;1.64e-07;4 | ||
|ontology_enrichment_disease=DOID:114!4.08e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.00e-13;2!DOID:1287;1.64e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.07e-13,2;DOID:1287,1.69e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001950!4.09e-14!20;UBERON:0002619!9.43e-13!22;UBERON:0007023!2.83e-11!115;UBERON:0000956!4.21e-11!25;UBERON:0000203!4.21e-11!25;UBERON:0002020!9.59e-10!34;UBERON:0003528!9.59e-10!34;UBERON:0007100!1.41e-09!27;UBERON:0001869!2.00e-08!32;UBERON:0002791!3.92e-08!33;UBERON:0001872!5.00e-08!5;UBERON:0002780!6.65e-08!41;UBERON:0001890!6.65e-08!41;UBERON:0006240!6.65e-08!41;UBERON:0001893!7.39e-08!34;UBERON:0001049!1.06e-07!57;UBERON:0005068!1.06e-07!57;UBERON:0006241!1.06e-07!57;UBERON:0007135!1.06e-07!57;UBERON:0003080!1.12e-07!42;UBERON:0002616!2.28e-07!59;UBERON:0004151!4.33e-07!3;UBERON:0003978!4.60e-07!3;UBERON:0009751!4.60e-07!3;UBERON:0000946!4.60e-07!3;UBERON:0002523!4.60e-07!3;UBERON:0005983!4.60e-07!3;UBERON:0002165!4.60e-07!3;UBERON:0002062!4.60e-07!3;UBERON:0007280!4.60e-07!3;UBERON:0002346!6.13e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.13e-35;25!UBERON:0004151;8.37e-34;3!UBERON:0002084;2.78e-26;1!UBERON:0002082;2.78e-26;1!UBERON:0002146;5.22e-26;1!UBERON:0005623;5.22e-26;1!UBERON:0007029;1.11e-25;1!UBERON:0002079;1.11e-25;1!UBERON:0000948;1.66e-18;22!UBERON:0002081;1.46e-13;2!UBERON:0003978;1.35e-09;3!UBERON:0000946;1.35e-09;3!UBERON:0003103;4.56e-08;61!UBERON:0000014;1.98e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,9.10e-34,3;UBERON:0007100,4.95e-33,27;UBERON:0002084,2.78e-26,1;UBERON:0002082,2.78e-26,1;UBERON:0010226,2.78e-26,1;UBERON:0002146,3.58e-26,1;UBERON:0005623,3.58e-26,1;UBERON:0007029,9.79e-26,1;UBERON:0002079,1.26e-25,1;UBERON:0000948,5.01e-17,24;UBERON:0005498,5.01e-17,24;UBERON:0004140,5.01e-17,24;UBERON:0009881,5.01e-17,24;UBERON:0004141,5.01e-17,24;UBERON:0003084,5.01e-17,24;UBERON:0007005,5.01e-17,24;UBERON:0004139,5.01e-17,24;UBERON:0004291,5.01e-17,24;UBERON:0002081,1.55e-13,2;UBERON:0010227,1.55e-13,2;UBERON:0003103,3.00e-13,68;UBERON:0003978,1.19e-09,3;UBERON:0009751,1.19e-09,3;UBERON:0000946,1.19e-09,3;UBERON:0002523,1.19e-09,3;UBERON:0005983,1.19e-09,3;UBERON:0002165,1.19e-09,3;UBERON:0002062,1.19e-09,3;UBERON:0007280,1.19e-09,3;UBERON:0001009,4.56e-08,112;UBERON:0000014,1.92e-07,4 | |||
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| ||
|short_description=p6@C2orf29 | |short_description=p6@C2orf29 | ||
}} | }} |
Latest revision as of 23:47, 15 September 2015
Short description: | p6@C2orf29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_C2orf29_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 4bp_to_ENST00000462489_5end |
EntrezGene: | C2orf29 |
HGNC: | 25217 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 9.10e-34 | 3 |
primary circulatory organ | 4.95e-33 | 27 |
heart left ventricle | 2.78e-26 | 1 |
cardiac ventricle | 2.78e-26 | 1 |
future cardiac ventricle | 2.78e-26 | 1 |
pulmonary valve | 3.58e-26 | 1 |
semi-lunar valve | 3.58e-26 | 1 |
surface | 9.79e-26 | 1 |
left cardiac atrium | 1.26e-25 | 1 |
heart | 5.01e-17 | 24 |
primitive heart tube | 5.01e-17 | 24 |
primary heart field | 5.01e-17 | 24 |
anterior lateral plate mesoderm | 5.01e-17 | 24 |
heart tube | 5.01e-17 | 24 |
heart primordium | 5.01e-17 | 24 |
cardiac mesoderm | 5.01e-17 | 24 |
cardiogenic plate | 5.01e-17 | 24 |
heart rudiment | 5.01e-17 | 24 |
cardiac atrium | 1.55e-13 | 2 |
future cardiac atrium | 1.55e-13 | 2 |
compound organ | 3.00e-13 | 68 |
valve | 1.19e-09 | 3 |
cardiac mesenchyme | 1.19e-09 | 3 |
cardial valve | 1.19e-09 | 3 |
tunica intima | 1.19e-09 | 3 |
heart layer | 1.19e-09 | 3 |
endocardium | 1.19e-09 | 3 |
endocardial cushion | 1.19e-09 | 3 |
presumptive endocardium | 1.19e-09 | 3 |
circulatory system | 4.56e-08 | 112 |
zone of skin | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.07e-13 | 2 |
cardiovascular system disease | 1.69e-07 | 4 |