FFCP PHASE1:Hg19::chr4:21699348..21699355,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80333 | |EntrezGene=80333 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30083 | |HGNC=30083 | ||
|TSSclassifier=strong | |||
|UniProt=Q3YAB9 | |UniProt=Q3YAB9 | ||
|association_with_transcript=-30bp_to_NM_001035003,uc003gqh.1_5end | |association_with_transcript=-30bp_to_NM_001035003,uc003gqh.1_5end | ||
|cluster_id=chr4:21699348..21699355,- | |||
|coexpression_cluster_id=C135 | |coexpression_cluster_id=C135 | ||
|description=CAGE_peak_25_at_KCNIP4_5end | |description=CAGE_peak_25_at_KCNIP4_5end | ||
|id=chr4:21699348..21699355,- | |id=chr4:21699348..21699355,- | ||
|ontology_enrichment_celltype=CL:0000123;4.52e-50;2!CL:0000242;4.52e-50;2!CL:0000333;4.21e-21;5!CL:0000312;5.15e-21;5!CL:0000240;9.07e-18;6!CL:0000311;9.07e-18;6!CL:0000079;9.07e-18;6!CL:0000237;9.07e-18;6!CL:0000362;2.45e-12;9!CL:0002159;2.00e-08;14!CL:0002321;5.55e-08;15 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000123;4.52e-50;2!CL:0000242;4.52e-50;2!CL:0000333;4.21e-21;5!CL:0000312;5.15e-21;5!CL:0000240;9.07e-18;6!CL:0000311;9.07e-18;6!CL:0000079;9.07e-18;6!CL:0000237;9.07e-18;6!CL:0000362;2.45e-12;9!CL:0002159;2.00e-08;14!CL:0002321;5.55e-08;15 | ||
|ontology_enrichment_disease=DOID:169;7.67e-18;6!DOID:171;2.73e-11;10 | |ontology_enrichment_celltype_v019_2=CL:0000242,4.52e-50,2;CL:0000312,5.15e-21,5;CL:0000240,9.07e-18,6;CL:0000311,9.07e-18,6;CL:0000079,9.07e-18,6;CL:0000237,9.07e-18,6;CL:0000036,9.07e-18,6;CL:0000357,9.07e-18,6;CL:0000114,9.07e-18,6;CL:0000362,2.45e-12,9;CL:0000333,1.77e-10,41;CL:0002159,2.00e-08,14;CL:0000133,9.44e-08,59 | ||
|ontology_enrichment_uberon=UBERON:0000013;4.21e-21;5!UBERON:0002410;4.21e-21;5!UBERON:0000010;2.19e-12;8!UBERON:0001003;5.93e-08;15!UBERON:0007376;5.93e-08;15 | |ontology_enrichment_development_v019=CL:0000357;9.07e-18;6!CL:0000114;9.07e-18;6!CL:0000221;7.96e-07;72 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;7.67e-18;6!DOID:171;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.67e-18,6;DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0003076!2.05e-21!15;UBERON:0003057!2.05e-21!15;UBERON:0000988!6.21e-21!3;UBERON:0004733!6.69e-20!12;UBERON:0002028!6.69e-20!12;UBERON:0007277!6.69e-20!12;UBERON:0002680!8.60e-19!9;UBERON:0001895!8.60e-19!9;UBERON:0010092!8.60e-19!9;UBERON:0004732!2.45e-18!13;UBERON:0002148!9.67e-15!2;UBERON:0009662!9.67e-15!2;UBERON:0002298!9.54e-14!8;UBERON:0004907!1.69e-13!5;UBERON:0007023!5.08e-12!115;UBERON:0006331!3.93e-10!3;UBERON:0000073!2.03e-09!94;UBERON:0001016!2.03e-09!94;UBERON:0005743!6.97e-09!86;UBERON:0001000!1.88e-08!1;UBERON:0005352!1.88e-08!1;UBERON:0001154!2.17e-08!1;UBERON:0001153!2.17e-08!1;UBERON:0001052!3.58e-08!4;UBERON:0001049!3.96e-08!57;UBERON:0005068!3.96e-08!57;UBERON:0006241!3.96e-08!57;UBERON:0007135!3.96e-08!57;UBERON:0001882!6.68e-08!1;UBERON:0005403!6.68e-08!1;UBERON:0002363!7.16e-08!1;UBERON:0007647!7.16e-08!1;UBERON:0010115!7.16e-08!1;UBERON:0001017!7.67e-08!82;UBERON:0003075!1.73e-07!86;UBERON:0007284!1.73e-07!86;UBERON:0002308!2.56e-07!9;UBERON:0000125!2.56e-07!9;UBERON:0002346!4.46e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;4.21e-21;5!UBERON:0002410;4.21e-21;5!UBERON:0000010;2.19e-12;8!UBERON:0001003;5.93e-08;15!UBERON:0007376;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.21e-21,5;UBERON:0002410,4.21e-21,5;UBERON:0000010,2.19e-12,8;UBERON:0001003,5.93e-08,15;UBERON:0007376,5.93e-08,15;UBERON:0007383,5.93e-08,15 | |||
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|short_description=p25@KCNIP4 | |short_description=p25@KCNIP4 | ||
}} | }} |
Latest revision as of 08:11, 17 September 2015
Short description: | p25@KCNIP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_KCNIP4_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | -30bp_to_NM_001035003, uc003gqh.1_5end |
EntrezGene: | KCNIP4 |
HGNC: | 30083 |
UniProt: | Q3YAB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.52e-50 | 2 |
keratinocyte | 5.15e-21 | 5 |
stratified squamous epithelial cell | 9.07e-18 | 6 |
keratin accumulating cell | 9.07e-18 | 6 |
stratified epithelial cell | 9.07e-18 | 6 |
keratinizing barrier epithelial cell | 9.07e-18 | 6 |
epithelial fate stem cell | 9.07e-18 | 6 |
stratified epithelial stem cell | 9.07e-18 | 6 |
surface ectodermal cell | 9.07e-18 | 6 |
epidermal cell | 2.45e-12 | 9 |
migratory neural crest cell | 1.77e-10 | 41 |
general ecto-epithelial cell | 2.00e-08 | 14 |
neurectodermal cell | 9.44e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.21e-21 | 5 |
autonomic nervous system | 4.21e-21 | 5 |
peripheral nervous system | 2.19e-12 | 8 |
skin epidermis | 5.93e-08 | 15 |
outer epithelium | 5.93e-08 | 15 |
enveloping layer of ectoderm | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.67e-18 | 6 |
neuroectodermal tumor | 2.73e-11 | 10 |