FFCP PHASE1:Hg19::chrX:139866071..139866091,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1038 | |EntrezGene=1038 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1798 | |HGNC=1798 | ||
|TSSclassifier=strong | |||
|UniProt=P51861 | |UniProt=P51861 | ||
|association_with_transcript=491bp_to_M16965_5end | |association_with_transcript=491bp_to_M16965_5end | ||
|cluster_id=chrX:139866071..139866091,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_4_at_CDR1_5end | |description=CAGE_peak_4_at_CDR1_5end | ||
|id=chrX:139866071..139866091,- | |id=chrX:139866071..139866091,- | ||
|ontology_enrichment_celltype=CL:0002521;6.78e-08;3!CL:0000136;5.11e-07;13 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002521;6.78e-08;3!CL:0000136;5.11e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0002521,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.29e-60;3!UBERON:0000358;2.08e-21;1!UBERON:0006222;5.16e-21;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
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|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;1.45e-30;6!UBERON:0002680;1.20e-20;9!UBERON:0001895;1.20e-20;9!UBERON:0004733;1.14e-15;12!UBERON:0002028;1.14e-15;12!UBERON:0004732;1.61e-14;13!UBERON:0000073;7.35e-09;53!UBERON:0002616;7.35e-09;53!UBERON:0002190;6.78e-08;3 | |||
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| ||
|short_description=p4@CDR1 | |short_description=p4@CDR1 | ||
}} | }} |
Latest revision as of 19:09, 19 September 2015
Short description: | p4@CDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDR1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 491bp_to_M16965_5end |
EntrezGene: | CDR1 |
HGNC: | 1798 |
UniProt: | P51861 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.13e-30 | 6 |
rhombic lip | 1.13e-30 | 6 |
regional part of metencephalon | 1.02e-20 | 9 |
metencephalon | 1.02e-20 | 9 |
future metencephalon | 1.02e-20 | 9 |
segmental subdivision of hindbrain | 1.00e-15 | 12 |
hindbrain | 1.00e-15 | 12 |
presumptive hindbrain | 1.00e-15 | 12 |
segmental subdivision of nervous system | 1.44e-14 | 13 |
regional part of nervous system | 3.12e-13 | 53 |
regional part of brain | 3.12e-13 | 53 |
posterior neural tube | 1.02e-12 | 15 |
chordal neural plate | 1.02e-12 | 15 |
neural tube | 1.56e-12 | 56 |
neural rod | 1.56e-12 | 56 |
future spinal cord | 1.56e-12 | 56 |
neural keel | 1.56e-12 | 56 |
brain | 3.45e-10 | 68 |
future brain | 3.45e-10 | 68 |
central nervous system | 1.42e-08 | 81 |
neural plate | 1.42e-08 | 82 |
presumptive neural plate | 1.42e-08 | 82 |
neurectoderm | 3.58e-08 | 86 |
subcutaneous adipose tissue | 8.29e-08 | 3 |
nervous system | 1.02e-07 | 89 |
ecto-epithelium | 9.68e-07 | 104 |