FFCP PHASE1:Hg19::chr10:92980468..92980485,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84333 | |EntrezGene=84333 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28264 | |HGNC=28264 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-54bp_to_ENST00000490164_5end | |association_with_transcript=-54bp_to_ENST00000490164_5end | ||
|cluster_id=chr10:92980468..92980485,+ | |||
|description=CAGE_peak_7_at_PCGF5_5end | |description=CAGE_peak_7_at_PCGF5_5end | ||
|id=chr10:92980468..92980485,+ | |id=chr10:92980468..92980485,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0002031!1.85e-09!124;CL:0000839!1.14e-08!70;CL:0002032!1.21e-08!165;CL:0000837!1.21e-08!165;CL:0000037!2.43e-08!172;CL:0000566!2.43e-08!172;CL:0000988!3.21e-08!182;CL:0000763!1.47e-07!112;CL:0000049!1.47e-07!112;CL:0000557!1.63e-07!71;CL:0000738!2.50e-07!140;CL:0000766!5.38e-07!76;CL:0002087!6.87e-07!119 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000839,5.83e-08,66;CL:0002031,1.43e-07,120;CL:0002032,5.52e-07,161;CL:0000837,5.52e-07,161;CL:0000763,7.44e-07,108;CL:0000049,7.44e-07,108;CL:0000557,8.03e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.90e-10!112;UBERON:0002390!2.78e-10!102;UBERON:0003061!2.78e-10!102;UBERON:0002405!1.75e-09!115;UBERON:0003081!1.80e-09!216;UBERON:0002371!2.73e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.57e-09,108;UBERON:0002390,2.15e-09,98;UBERON:0003061,2.15e-09,98;UBERON:0003081,2.72e-09,203;UBERON:0002405,2.00e-07,93;UBERON:0002371,8.22e-07,76 | |||
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| ||
|short_description=p7@PCGF5 | |short_description=p7@PCGF5 | ||
}} | }} |
Latest revision as of 23:47, 19 September 2015
Short description: | p7@PCGF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PCGF5_5end |
Coexpression cluster: | NA |
Association with transcript: | -54bp_to_ENST00000490164_5end |
EntrezGene: | PCGF5 |
HGNC: | 28264 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 5.83e-08 | 66 |
hematopoietic lineage restricted progenitor cell | 1.43e-07 | 120 |
hematopoietic oligopotent progenitor cell | 5.52e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.52e-07 | 161 |
myeloid cell | 7.44e-07 | 108 |
common myeloid progenitor | 7.44e-07 | 108 |
granulocyte monocyte progenitor cell | 8.03e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.57e-09 | 108 |
hematopoietic system | 2.15e-09 | 98 |
blood island | 2.15e-09 | 98 |
lateral plate mesoderm | 2.72e-09 | 203 |
immune system | 2.00e-07 | 93 |
bone marrow | 8.22e-07 | 76 |