FFCP PHASE1:Hg19::chr1:87595433..87595455,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339524 | |EntrezGene=339524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_026988,NR_026989,uc001dmf.2,uc010osl.1_5end | |association_with_transcript=0bp_to_NR_026988,NR_026989,uc001dmf.2,uc010osl.1_5end | ||
|cluster_id=chr1:87595433..87595455,+ | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_1_at_LOC339524_5end | |description=CAGE_peak_1_at_LOC339524_5end | ||
|id=chr1:87595433..87595455,+ | |id=chr1:87595433..87595455,+ | ||
|ontology_enrichment_celltype=CL:0000136;5.51e-44;13!CL:0002521;1.80e-18;3!CL:0002615;1.88e-08;3 | |ontology_enrichment_celltype=CL:0000136!1.54e-14!15;CL:0002274!6.26e-09!5;CL:0000457!6.26e-09!5;CL:0002191!6.26e-09!5;CL:0000097!6.26e-09!5;CL:0000831!6.26e-09!5;CL:0002028!6.26e-09!5;CL:0002521!5.26e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000136;5.51e-44;13!CL:0002521;1.80e-18;3!CL:0002615;1.88e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.07e-38,15;CL:0002521,2.22e-18,3;CL:0002615,1.88e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.65e-13;4!UBERON:0007284;1.65e-13;4!UBERON:0008801;5.94e-07;1!UBERON:0003124;5.94e-07;1!UBERON:0010227;5.94e-07;1!UBERON:0010115;5.94e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002072;5.30e-19;5!UBERON:0002190;1.80e-18;3!UBERON:0003978;7.97e-18;3!UBERON:0000946;7.97e-18;3!UBERON:0002081;1.39e-12;2!UBERON:0002133;1.39e-12;2!UBERON:0004151;1.12e-08;3!UBERON:0007100;1.00e-07;25!UBERON:0002134;2.67e-07;1!UBERON:0005208;2.67e-07;1!UBERON:0004145;2.67e-07;1!UBERON:0005946;2.67e-07;1!UBERON:0005965;2.67e-07;1!UBERON:0002078;2.67e-07;1!UBERON:0001013;5.66e-07;14!UBERON:0002363;5.94e-07;1!UBERON:0002079;5.94e-07;1!UBERON:0001831;5.94e-07;1!UBERON:0002135;5.94e-07;1!UBERON:0002146;5.94e-07;1!UBERON:0005623;5.94e-07;1!UBERON:0001567;5.94e-07;1 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.55e-26!115;UBERON:0002190!5.26e-07!3;UBERON:0002072!7.10e-07!5;UBERON:0003978!8.13e-07!3;UBERON:0009751!8.13e-07!3;UBERON:0000946!8.13e-07!3;UBERON:0002523!8.13e-07!3;UBERON:0005983!8.13e-07!3;UBERON:0002165!8.13e-07!3;UBERON:0002062!8.13e-07!3;UBERON:0007280!8.13e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002072;5.30e-19;5!UBERON:0002190;1.80e-18;3!UBERON:0003978;7.97e-18;3!UBERON:0000946;7.97e-18;3!UBERON:0002081;1.39e-12;2!UBERON:0002133;1.39e-12;2!UBERON:0004151;1.12e-08;3!UBERON:0007100;1.00e-07;25!UBERON:0002134;2.67e-07;1!UBERON:0005208;2.67e-07;1!UBERON:0004145;2.67e-07;1!UBERON:0005946;2.67e-07;1!UBERON:0005965;2.67e-07;1!UBERON:0002078;2.67e-07;1!UBERON:0001013;5.66e-07;14!UBERON:0002363;5.94e-07;1!UBERON:0002079;5.94e-07;1!UBERON:0001831;5.94e-07;1!UBERON:0002135;5.94e-07;1!UBERON:0002146;5.94e-07;1!UBERON:0005623;5.94e-07;1!UBERON:0001567;5.94e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002072,7.72e-19,5;UBERON:0002190,2.22e-18,3;UBERON:0003978,8.48e-18,3;UBERON:0009751,8.48e-18,3;UBERON:0000946,8.48e-18,3;UBERON:0002523,8.48e-18,3;UBERON:0005983,8.48e-18,3;UBERON:0002165,8.48e-18,3;UBERON:0002062,8.48e-18,3;UBERON:0007280,8.48e-18,3;UBERON:0002081,1.21e-12,2;UBERON:0010227,1.21e-12,2;UBERON:0002133,2.16e-12,2;UBERON:0004151,1.02e-08,3;UBERON:0004797,6.51e-08,7;UBERON:0002134,2.84e-07,1;UBERON:0005208,2.84e-07,1;UBERON:0005946,2.84e-07,1;UBERON:0005965,2.84e-07,1;UBERON:0002078,2.84e-07,1;UBERON:0007100,3.59e-07,27;UBERON:0002146,4.06e-07,1;UBERON:0005623,4.06e-07,1;UBERON:0002079,4.85e-07,1;UBERON:0001013,5.99e-07,14;UBERON:0002135,8.67e-07,1;UBERON:0001831,9.18e-07,1;UBERON:0001567,9.18e-07,1;UBERON:0008801,9.18e-07,1 | |||
|phase1_expression=0.54503513781167,2.35510576280081,1.40954404095971,0,1.34088328328186,0,5.06599756336621,1.26343974685366,16.19350894839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.361439152384566,0,1.30361867064741,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.414656231081544,1.8735593944205,3.1560608356595,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,1.3996218765488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0,0,1.23367755042124,0,0.98552587216571,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37402137902306,0,0,0,0,0,0,0,0,0,0,4.8347699159725,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,1.87422470710174,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0.274792780205587,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.707660516026713,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,1.0741718536843,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.775912131907355,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,1.60412296808179,2.15361907373044,0.599037001496973,0.858452096273142,1.78537165953498,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.236417121897595,0.472091293214983,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.747511887973863,2.67247318669432,0.414239055347196,0.992332043623902,0,0,0,19.5846409213011,11.0303553369988,18.6870801825712,19.0166125811687,0,0,0.244052529803926,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0.934853239388898,0,0,0,0,0,0.302461847526478,0,0,0.318593534327405,0,0.155262956876259,0,0,0,0.751288044986092,0.761610424337591,0,1.09109195521536,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0,0,0,1.09651553371436,0.992422356778588,0,0,0,0,0,0.455324382702595,1.50794029276486,0,0,0,0.0657727735628491,0,0,0.706437835654626,0,0,0,0,0,0.285906176706625,0,1.51113852978563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513314034281235,0,0.971421986118279,0,0,0,0,0,0,0.540219106755613,0,0,0.735444965261716,0,0,0,0,0,0.563903507879121,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.833565680400634,0,0,0,1.0661699095049,0.23806443146374,0,0.124149428591716,0,1.14564884900697,0,0.870866991587845,0,0.404112318087525,0.860666464712116,0.332660356546013,0,0,0,0,0,0,0,0,0.805095174364105,0 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|phase1_expression=0.54503513781167,2.35510576280081,1.40954404095971,0,1.34088328328186,0,5.06599756336621,1.26343974685366,16.19350894839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.361439152384566,0,1.30361867064741,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.414656231081544,1.8735593944205,3.1560608356595,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,1.3996218765488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0,0,1.23367755042124,0,0.98552587216571,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37402137902306,0,0,0,0,0,0,0,0,0,0,4.8347699159725,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,1.87422470710174,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0.274792780205587,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.707660516026713,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,1.0741718536843,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.775912131907355,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,1.60412296808179,2.15361907373044,0.599037001496973,0.858452096273142,1.78537165953498,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.236417121897595,0.472091293214983,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.747511887973863,2.67247318669432,0.414239055347196,0.992332043623902,0,0,0,19.5846409213011,11.0303553369988,18.6870801825712,19.0166125811687,0,0,0.244052529803926,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0.934853239388898,0,0,0,0,0,0.302461847526478,0,0,0.318593534327405,0,0.155262956876259,0,0,0,0.751288044986092,0.761610424337591,0,1.09109195521536,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0,0,0,1.09651553371436,0.992422356778588,0,0,0,0,0,0.455324382702595,1.50794029276486,0,0,0,0.0657727735628491,0,0,0.706437835654626,0,0,0,0,0,0.285906176706625,0,1.51113852978563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513314034281235,0,0.971421986118279,0,0,0,0,0,0,0.540219106755613,0,0,0.735444965261716,0,0,0,0,0,0.563903507879121,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.833565680400634,0,0,0,1.0661699095049,0.23806443146374,0,0.124149428591716,0,1.14564884900697,0,0.870866991587845,0,0.404112318087525,0.860666464712116,0.332660356546013,0,0,0,0,0,0,0,0,0.805095174364105,0 | ||
|short_description=p1@LOC339524 | |short_description=p1@LOC339524 | ||
}} | }} |
Latest revision as of 15:00, 19 September 2015
Short description: | p1@LOC339524 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC339524_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 0bp_to_NR_026988, NR_026989, uc001dmf.2, uc010osl.1_5end |
EntrezGene: | LOC339524 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.07e-38 | 15 |
subcutaneous fat cell | 2.22e-18 | 3 |
adipocyte of omentum tissue | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hypodermis | 7.72e-19 | 5 |
subcutaneous adipose tissue | 2.22e-18 | 3 |
valve | 8.48e-18 | 3 |
cardiac mesenchyme | 8.48e-18 | 3 |
cardial valve | 8.48e-18 | 3 |
tunica intima | 8.48e-18 | 3 |
heart layer | 8.48e-18 | 3 |
endocardium | 8.48e-18 | 3 |
endocardial cushion | 8.48e-18 | 3 |
presumptive endocardium | 8.48e-18 | 3 |
cardiac atrium | 1.21e-12 | 2 |
future cardiac atrium | 1.21e-12 | 2 |
atrioventricular valve | 2.16e-12 | 2 |
cardiac chamber | 1.02e-08 | 3 |
blood vessel layer | 6.51e-08 | 7 |
tricuspid valve | 2.84e-07 | 1 |
right atrium valve | 2.84e-07 | 1 |
outflow tract of atrium | 2.84e-07 | 1 |
outflow part of right atrium | 2.84e-07 | 1 |
right cardiac atrium | 2.84e-07 | 1 |
primary circulatory organ | 3.59e-07 | 27 |
pulmonary valve | 4.06e-07 | 1 |
semi-lunar valve | 4.06e-07 | 1 |
left cardiac atrium | 4.85e-07 | 1 |
adipose tissue | 5.99e-07 | 14 |
mitral valve | 8.67e-07 | 1 |
parotid gland | 9.18e-07 | 1 |
cheek | 9.18e-07 | 1 |
parotid gland primordium | 9.18e-07 | 1 |