FFCP PHASE1:Hg19::chr1:207498974..207498994,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1604 | |EntrezGene=1604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=2665 | |HGNC=2665 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_uc009xcg.2_5end | |association_with_transcript=7bp_to_uc009xcg.2_5end | ||
|cluster_id=chr1:207498974..207498994,+ | |||
|coexpression_cluster_id=C531 | |coexpression_cluster_id=C531 | ||
|description=CAGE_peak_9_at_CD55_5end | |description=CAGE_peak_9_at_CD55_5end | ||
|id=chr1:207498974..207498994,+ | |id=chr1:207498974..207498994,+ | ||
|ontology_enrichment_celltype=CL:0000860;1.24e-21;33!CL:0002057;1.24e-21;33!CL:0000473;2.41e-15;39!CL:0000234;2.41e-15;39!CL:0000775;2.64e-11;3!CL:0000766;3.99e-11;69!CL:0000094;1.26e-10;8!CL:0002537;2.89e-10;5!CL:0000576;3.56e-10;48!CL:0000771;1.22e-07;2!CL:0000081;1.30e-07;11 | |ontology_enrichment_celltype=CL:0000860!1.78e-15!45;CL:0002057!2.31e-13!42;CL:0000766!9.13e-10!76;CL:0000839!1.65e-08!70;CL:0002009!2.10e-08!65;CL:0002194!2.36e-08!63;CL:0000576!2.36e-08!63;CL:0000040!2.36e-08!63;CL:0000559!2.36e-08!63;CL:0000557!1.03e-07!71;CL:0000763!1.70e-07!112;CL:0000049!1.70e-07!112 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.24e-21;33!CL:0002057;1.24e-21;33!CL:0000473;2.41e-15;39!CL:0000234;2.41e-15;39!CL:0000775;2.64e-11;3!CL:0000766;3.99e-11;69!CL:0000094;1.26e-10;8!CL:0002537;2.89e-10;5!CL:0000576;3.56e-10;48!CL:0000771;1.22e-07;2!CL:0000081;1.30e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.98e-20,42;CL:0002057,3.98e-20,42;CL:0000766,1.58e-17,72;CL:0000473,4.88e-17,48;CL:0000234,4.88e-17,48;CL:0002194,9.74e-13,59;CL:0000576,9.74e-13,59;CL:0000040,9.74e-13,59;CL:0000559,9.74e-13,59;CL:0002009,3.47e-12,61;CL:0000775,2.66e-11,3;CL:0000839,5.92e-11,66;CL:0000557,9.92e-11,67;CL:0000094,1.21e-10,8;CL:0002537,3.54e-10,5;CL:0000763,7.66e-10,108;CL:0000049,7.66e-10,108;CL:0000738,3.66e-09,136;CL:0000771,1.13e-07,2;CL:0000081,1.26e-07,11;CL:0002032,7.74e-07,161;CL:0000837,7.74e-07,161;CL:0002087,8.62e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;6.66e-15;42!UBERON:0008947;5.48e-12;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001737;1.67e-29;9!UBERON:0001557;1.67e-29;9!UBERON:0005631;9.98e-08;10!UBERON:0000158;9.98e-08;10!UBERON:0000305;2.43e-07;7!UBERON:0000065;4.89e-07;44!UBERON:0000072;6.57e-07;37 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.59e-08!9;UBERON:0002390!1.26e-07!102;UBERON:0003061!1.26e-07!102;UBERON:0001474!1.61e-07!86;UBERON:0002193!2.61e-07!112;UBERON:0002371!7.84e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.67e-29;9!UBERON:0001557;1.67e-29;9!UBERON:0005631;9.98e-08;10!UBERON:0000158;9.98e-08;10!UBERON:0000305;2.43e-07;7!UBERON:0000065;4.89e-07;44!UBERON:0000072;6.57e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.91e-29,9;UBERON:0001557,5.73e-13,19;UBERON:0001474,3.10e-10,82;UBERON:0002371,3.56e-10,76;UBERON:0004765,6.34e-09,90;UBERON:0008947,1.51e-08,38;UBERON:0003258,1.51e-08,38;UBERON:0001434,1.36e-07,100;UBERON:0002405,1.51e-07,93;UBERON:0000305,2.80e-07,7;UBERON:0002390,5.91e-07,98;UBERON:0003061,5.91e-07,98 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0.436882744260345,0,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0.553995408531877,0.802177789880567,1.08505435357926,0,0,0,0.436194716338694,0,0,0.929716147622738,1.23350366406548,0.619412741790207,0.28769239232215,1.2808035326455,1.6553756092201,2.75796544589295,1.93645405075148,2.70852973188684,1.50593871634084,0.545812300115692,1.79778787556068,3.97909060082173,1.92557416245656,4.47535988059329,0,0.398927315243264,0,4.35313857942876,1.70215567407342,1.86846674698672,1.00499466102697,0.521482918420201,0.65156653411535,1.21079900526674,0,4.43047342417238,0,0.212604299965044,0.419317291016752,0.673971786878971,0.150176892841506,0.32145117339416,0,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,1.17447437874188,1.14681968437569,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0.651844533267181,0,0,0.111410456885174,0,0.443067789167242,0,0.25618263945135,0.130059347559878,0.164437904603676,0.276350017785848,0,0.593146252648242,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0,0,0.434473211648397,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0.973269740605272,0,0.665188192387692,0,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.446498641420399,0.22452937262617,0.112611480483322,0,0,0.183201743930407,1.31780417436063,7.75560528296651,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0,0,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0.741800787835671,0,0,0,0,0,0,0,0,0.453728732640084,0,0.640672166455702,0,0,0.103052529238439,0,0,0,0.194874010322397,0,0.184099797284599,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0.643240938192885,0,0,0,3.43089720115547,3.54027849164014,2.41011029883482,4.52205288202815,2.39667388501647,3.55905928666645,3.50561401216427,3.53198637225623,5.00171304030308,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0.117408694235822,0.288732895522148,0,0.570762456703795,0.790204397959275,0,0,0,0.148631162288728,0,0,0,0.447792613514241,0.290633938513962,0,0,0.088048434013226,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0.600686115687835,0,0,0,0,0.129271715757778,0,0,1.06375246633948,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.898401253958239,0,0,0,0,0,3.74503511973591,8.97484377612075,4.14415513436035,0,0,0,0.415941723061614,0.713715955188647,0.473107245101804,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0.426910231213777,0,0,0.604780586659361,0,0.153461973288062,0.280660094433074,0.256278298511402,0,1.12597744800525,0,0,0.355123450626254,0.0821271560138091,0,0.232420756919918,0.362578348774867,0,0.460404944679482,0.34444334449382,0.910455840033585,0.262248829918848,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0.219259876645935,0.784306353074702,0.256450125116389,0,0.325378394664303,0.515205058238611,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0.275673144969061,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0.658589785919804,0.379473173765715,0,0.192444225451024,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.822724546172388,0,0,0.79312517629427,0,0,0,0.371606350251437,0.144269212976445,0,0.159426272728822,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0.561421621224659,0.146508179271894,0,0,0,3.10367830158997,1.18785872333055,1.84296421259539,0,0.281338832821026,0.111308705022906,0,0,0.597743964753209,0,0,0,0.123084805461069,0.622079175323615,0.0898683511473268,0.716084698702437,0,0.394573622547734,0,0,0,0.185536196323703,0,0.520855522170466,0.174919999992391,0,0.1137934482855,0.508507300585533,0.236387681767936,0,0,0,0,0.120596438625408,1.52581736317083,0,0,0,0.871507708151921,0.278847488557207,0.307801034015188,0.341826167541004,1.38338342632836,1.79515288819544,2.17294743844016,2.87101043758728,0.549585560411174,0,0,0.156980256395025,0.664846727600626,0,0.19606253431774,0.335643173951685,0.37950746544837,0.635746315921515,0.210998064528027,0,0,0.216388639742091,0,0.0884575645033392,0,0.593042257361244,0.247127877893006,0.313265848516366,0.134802265961354,0.802577647298789,0,0.182454789215666,0.19566461893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| ||
|short_description=p9@CD55 | |short_description=p9@CD55 | ||
}} | }} |
Latest revision as of 07:47, 20 September 2015
Short description: | p9@CD55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CD55_5end |
Coexpression cluster: | C531_Neutrophils_Eosinophils_large_CD14_rectal_epitheloid_Hep2 |
Association with transcript: | 7bp_to_uc009xcg.2_5end |
EntrezGene: | CD55 |
HGNC: | 2665 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.98e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.98e-20 | 42 |
myeloid leukocyte | 1.58e-17 | 72 |
defensive cell | 4.88e-17 | 48 |
phagocyte | 4.88e-17 | 48 |
monopoietic cell | 9.74e-13 | 59 |
monocyte | 9.74e-13 | 59 |
monoblast | 9.74e-13 | 59 |
promonocyte | 9.74e-13 | 59 |
macrophage dendritic cell progenitor | 3.47e-12 | 61 |
neutrophil | 2.66e-11 | 3 |
myeloid lineage restricted progenitor cell | 5.92e-11 | 66 |
granulocyte monocyte progenitor cell | 9.92e-11 | 67 |
granulocyte | 1.21e-10 | 8 |
amnion mesenchymal stem cell | 3.54e-10 | 5 |
myeloid cell | 7.66e-10 | 108 |
common myeloid progenitor | 7.66e-10 | 108 |
leukocyte | 3.66e-09 | 136 |
eosinophil | 1.13e-07 | 2 |
blood cell | 1.26e-07 | 11 |
hematopoietic oligopotent progenitor cell | 7.74e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.74e-07 | 161 |
nongranular leukocyte | 8.62e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.91e-29 | 9 |
upper respiratory tract | 5.73e-13 | 19 |
bone element | 3.10e-10 | 82 |
bone marrow | 3.56e-10 | 76 |
skeletal element | 6.34e-09 | 90 |
respiratory primordium | 1.51e-08 | 38 |
endoderm of foregut | 1.51e-08 | 38 |
skeletal system | 1.36e-07 | 100 |
immune system | 1.51e-07 | 93 |
amnion | 2.80e-07 | 7 |
hematopoietic system | 5.91e-07 | 98 |
blood island | 5.91e-07 | 98 |