FFCP PHASE1:Hg19::chr15:85523687..85523747,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5151 | |EntrezGene=5151 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8793 | |HGNC=8793 | ||
|TSSclassifier=strong | |||
|UniProt=O60658 | |UniProt=O60658 | ||
|association_with_transcript=0bp_to_ENST00000557957,NM_001243137_5end | |association_with_transcript=0bp_to_ENST00000557957,NM_001243137_5end | ||
|cluster_id=chr15:85523687..85523747,+ | |||
|description=CAGE_peak_2_at_PDE8A_5end | |description=CAGE_peak_2_at_PDE8A_5end | ||
|id=chr15:85523687..85523747,+ | |id=chr15:85523687..85523747,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002780;4.20e-10;41!UBERON:0001890;4.20e-10;41!UBERON:0000073;1.28e-08;53!UBERON:0002616;1.28e-08;53!UBERON:0003528;2.52e-08;34!UBERON:0002020;2.52e-08;34!UBERON:0001893;4.24e-08;34!UBERON:0002791;8.82e-08;32!UBERON:0001869;1.52e-07;32 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.06e-14!115;UBERON:0001049!1.07e-13!57;UBERON:0005068!1.07e-13!57;UBERON:0006241!1.07e-13!57;UBERON:0007135!1.07e-13!57;UBERON:0002780!1.31e-12!41;UBERON:0001890!1.31e-12!41;UBERON:0006240!1.31e-12!41;UBERON:0003080!1.28e-11!42;UBERON:0000073!1.93e-11!94;UBERON:0001016!1.93e-11!94;UBERON:0001017!4.90e-11!82;UBERON:0002616!1.09e-10!59;UBERON:0000955!1.10e-10!69;UBERON:0006238!1.10e-10!69;UBERON:0005743!2.20e-10!86;UBERON:0002020!3.79e-09!34;UBERON:0003528!3.79e-09!34;UBERON:0001893!5.17e-09!34;UBERON:0002791!1.14e-08!33;UBERON:0002346!2.88e-08!90;UBERON:0001869!5.48e-08!32;UBERON:0003075!5.60e-08!86;UBERON:0007284!5.60e-08!86;UBERON:0003056!1.55e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.20e-10;41!UBERON:0001890;4.20e-10;41!UBERON:0000073;1.28e-08;53!UBERON:0002616;1.28e-08;53!UBERON:0003528;2.52e-08;34!UBERON:0002020;2.52e-08;34!UBERON:0001893;4.24e-08;34!UBERON:0002791;8.82e-08;32!UBERON:0001869;1.52e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.80e-15,56;UBERON:0005068,1.80e-15,56;UBERON:0006241,1.80e-15,56;UBERON:0007135,1.80e-15,56;UBERON:0007023,6.78e-15,114;UBERON:0000073,1.67e-14,53;UBERON:0002616,1.67e-14,53;UBERON:0002780,1.94e-13,41;UBERON:0001890,1.94e-13,41;UBERON:0003080,1.94e-13,41;UBERON:0006240,1.94e-13,41;UBERON:0001016,1.56e-12,89;UBERON:0001017,1.35e-11,81;UBERON:0000955,2.31e-11,68;UBERON:0006238,2.31e-11,68;UBERON:0002346,7.94e-11,86;UBERON:0003075,2.01e-10,82;UBERON:0007284,2.01e-10,82;UBERON:0003528,8.96e-10,34;UBERON:0002020,8.96e-10,34;UBERON:0001893,1.25e-09,34;UBERON:0003056,4.14e-09,61;UBERON:0002791,9.77e-09,32;UBERON:0001869,1.52e-08,32;UBERON:0010371,1.93e-07,104 | |||
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| ||
|short_description=p2@PDE8A | |short_description=p2@PDE8A | ||
}} | }} |
Latest revision as of 13:18, 19 September 2015
Short description: | p2@PDE8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PDE8A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000557957, NM_001243137_5end |
EntrezGene: | PDE8A |
HGNC: | 8793 |
UniProt: | O60658 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.80e-15 | 56 |
neural rod | 1.80e-15 | 56 |
future spinal cord | 1.80e-15 | 56 |
neural keel | 1.80e-15 | 56 |
adult organism | 6.78e-15 | 114 |
regional part of nervous system | 1.67e-14 | 53 |
regional part of brain | 1.67e-14 | 53 |
regional part of forebrain | 1.94e-13 | 41 |
forebrain | 1.94e-13 | 41 |
anterior neural tube | 1.94e-13 | 41 |
future forebrain | 1.94e-13 | 41 |
nervous system | 1.56e-12 | 89 |
central nervous system | 1.35e-11 | 81 |
brain | 2.31e-11 | 68 |
future brain | 2.31e-11 | 68 |
neurectoderm | 7.94e-11 | 86 |
neural plate | 2.01e-10 | 82 |
presumptive neural plate | 2.01e-10 | 82 |
brain grey matter | 8.96e-10 | 34 |
gray matter | 8.96e-10 | 34 |
telencephalon | 1.25e-09 | 34 |
pre-chordal neural plate | 4.14e-09 | 61 |
regional part of telencephalon | 9.77e-09 | 32 |
cerebral hemisphere | 1.52e-08 | 32 |
ecto-epithelium | 1.93e-07 | 104 |