FFCP PHASE1:Hg19::chr17:80194004..80194018,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9123 | |EntrezGene=9123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10924 | |HGNC=10924 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=121bp_to_HQ258434_5end | |association_with_transcript=121bp_to_HQ258434_5end | ||
|cluster_id=chr17:80194004..80194018,+ | |||
|description=CAGE_peak_8_at_SLC16A3_5end | |description=CAGE_peak_8_at_SLC16A3_5end | ||
|id=chr17:80194004..80194018,+ | |id=chr17:80194004..80194018,+ | ||
|ontology_enrichment_celltype=CL:0000650;2.60e-10;2!CL:1000500;2.60e-10;2!CL:1000618;2.60e-10;2!CL:1001318;2.60e-10;2!CL:0002173;2.60e-10;2!CL:1000507;3.89e-08;10!CL:1000494;3.89e-08;10!CL:0002592;1.82e-07;3!CL:0000346;2.71e-07;3!CL:1000428;2.71e-07;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000650;2.60e-10;2!CL:1000500;2.60e-10;2!CL:1000618;2.60e-10;2!CL:1001318;2.60e-10;2!CL:0002173;2.60e-10;2!CL:1000507;3.89e-08;10!CL:1000494;3.89e-08;10!CL:0002592;1.82e-07;3!CL:0000346;2.71e-07;3!CL:1000428;2.71e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000650,3.58e-10,2;CL:1000500,3.58e-10,2;CL:1000618,3.58e-10,2;CL:1001318,3.58e-10,2;CL:0002173,3.58e-10,2;CL:1000507,4.04e-08,10;CL:1000494,4.04e-08,10;CL:0002592,1.82e-07,3;CL:0000346,2.47e-07,3;CL:1000428,2.47e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.18e-19;1!UBERON:0003124;1.18e-19;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003567;2.60e-10;2!UBERON:0003838;2.60e-10;2!UBERON:0003586;2.60e-10;2!UBERON:0005169;2.60e-10;2!UBERON:0002321;2.60e-10;2!UBERON:0005215;2.60e-10;2!UBERON:0002303;2.60e-10;2!UBERON:0002319;2.60e-10;2!UBERON:0004211;3.89e-08;10!UBERON:0009773;3.89e-08;10!UBERON:0001231;3.89e-08;10!UBERON:0004810;3.89e-08;10!UBERON:0003498;1.82e-07;3!UBERON:0005985;1.82e-07;3!UBERON:0001621;1.82e-07;3!UBERON:0000412;2.71e-07;3!UBERON:0001992;2.71e-07;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;2.60e-10;2!UBERON:0003838;2.60e-10;2!UBERON:0003586;2.60e-10;2!UBERON:0005169;2.60e-10;2!UBERON:0002321;2.60e-10;2!UBERON:0005215;2.60e-10;2!UBERON:0002303;2.60e-10;2!UBERON:0002319;2.60e-10;2!UBERON:0004211;3.89e-08;10!UBERON:0009773;3.89e-08;10!UBERON:0001231;3.89e-08;10!UBERON:0004810;3.89e-08;10!UBERON:0003498;1.82e-07;3!UBERON:0005985;1.82e-07;3!UBERON:0001621;1.82e-07;3!UBERON:0000412;2.71e-07;3!UBERON:0001992;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,3.58e-10,2;UBERON:0003838,3.58e-10,2;UBERON:0003586,3.58e-10,2;UBERON:0005169,3.58e-10,2;UBERON:0002321,3.58e-10,2;UBERON:0005215,3.58e-10,2;UBERON:0002303,3.58e-10,2;UBERON:0002319,3.58e-10,2;UBERON:0004810,4.04e-08,10;UBERON:0001621,1.82e-07,3;UBERON:0000412,2.47e-07,3;UBERON:0001992,2.47e-07,3 | |||
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| ||
|short_description=p8@SLC16A3 | |short_description=p8@SLC16A3 | ||
}} | }} |
Latest revision as of 11:44, 18 September 2015
Short description: | p8@SLC16A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLC16A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 121bp_to_HQ258434_5end |
EntrezGene: | SLC16A3 |
HGNC: | 10924 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 3.58e-10 | 2 |
kidney interstitial cell | 3.58e-10 | 2 |
juxtaglomerular complex cell | 3.58e-10 | 2 |
renal interstitial pericyte | 3.58e-10 | 2 |
extraglomerular mesangial cell | 3.58e-10 | 2 |
kidney tubule cell | 4.04e-08 | 10 |
nephron tubule epithelial cell | 4.04e-08 | 10 |
smooth muscle cell of the coronary artery | 1.82e-07 | 3 |
hair follicle dermal papilla cell | 2.47e-07 | 3 |
stem cell of epidermis | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 3.58e-10 | 2 |
abdominal segment connective tissue | 3.58e-10 | 2 |
trunk connective tissue | 3.58e-10 | 2 |
interstitial tissue | 3.58e-10 | 2 |
extraglomerular mesangium | 3.58e-10 | 2 |
kidney interstitium | 3.58e-10 | 2 |
juxtaglomerular apparatus | 3.58e-10 | 2 |
mesangium | 3.58e-10 | 2 |
nephron tubule epithelium | 4.04e-08 | 10 |
coronary artery | 1.82e-07 | 3 |
dermal papilla | 2.47e-07 | 3 |
papillary layer of dermis | 2.47e-07 | 3 |