FFCP PHASE1:Hg19::chr9:130914283..130914293,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:130914283..130914293,- | |||
|coexpression_cluster_id=C484 | |coexpression_cluster_id=C484 | ||
|description=CAGE_peak_at_chr9:130914283..130914293,- | |description=CAGE_peak_at_chr9:130914283..130914293,- | ||
|id=chr9:130914283..130914293,- | |id=chr9:130914283..130914293,- | ||
|ontology_enrichment_celltype=CL:0002231;2.31e-12;3!CL:0000312;7.01e-08;5!CL:0000240;8.97e-07;6!CL:0000311;8.97e-07;6!CL:0000079;8.97e-07;6!CL:0000237;8.97e-07;6 | |ontology_enrichment_celltype=CL:0000223!2.59e-12!59;CL:0002076!3.74e-12!43;CL:0000066!1.06e-10!254;CL:0002231!4.60e-09!3;CL:0002178!8.03e-09!3;CL:1001319!1.85e-07!1;CL:1000600!1.85e-07!1;CL:0000313!3.02e-07!1 | ||
| | |ontology_enrichment_celltype_v019=CL:0002231;2.31e-12;3!CL:0000312;7.01e-08;5!CL:0000240;8.97e-07;6!CL:0000311;8.97e-07;6!CL:0000079;8.97e-07;6!CL:0000237;8.97e-07;6 | ||
|ontology_enrichment_disease=DOID:1749;1.90e-10;14 | |ontology_enrichment_celltype_v019_2=CL:0002231,2.31e-12,3;CL:0000312,7.01e-08,5;CL:0000240,8.97e-07,6;CL:0000311,8.97e-07,6;CL:0000079,8.97e-07,6;CL:0000237,8.97e-07,6;CL:0000036,8.97e-07,6;CL:0000357,8.97e-07,6;CL:0000114,8.97e-07,6 | ||
|ontology_enrichment_uberon=UBERON:0006562;5.48e-18;2 | |ontology_enrichment_development_v019=CL:0000357;8.97e-07;6!CL:0000114;8.97e-07;6 | ||
|ontology_enrichment_disease=DOID:305!1.80e-14!106;DOID:299!4.47e-14!25;DOID:3493!1.15e-12!2;DOID:1749!1.14e-10!14;DOID:0050687!9.37e-10!143;DOID:3111!1.74e-07!1;DOID:3603!1.74e-07!1;DOID:2152!3.02e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.90e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.99e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000162!1.93e-10!14;UBERON:0001353!1.93e-10!14;UBERON:0000163!1.93e-10!14;UBERON:0006866!1.93e-10!14;UBERON:0000164!1.93e-10!14;UBERON:0000931!1.93e-10!14;UBERON:0004122!9.93e-10!15;UBERON:0004921!1.40e-09!129;UBERON:0004185!1.40e-09!129;UBERON:0002367!9.15e-09!11;UBERON:0010147!9.15e-09!11;UBERON:0009846!9.15e-09!11;UBERON:0003353!9.15e-09!11;UBERON:0004902!9.15e-09!11;UBERON:0003820!9.15e-09!11;UBERON:0009847!9.15e-09!11;UBERON:0004119!1.53e-08!169;UBERON:0000925!1.53e-08!169;UBERON:0006595!1.53e-08!169;UBERON:0000077!2.82e-08!130;UBERON:0003937!4.83e-08!12;UBERON:0005399!4.83e-08!12;UBERON:0001046!1.25e-07!19;UBERON:0004645!1.85e-07!1;UBERON:0001256!1.85e-07!1;UBERON:0001259!1.85e-07!1;UBERON:0000997!1.97e-07!1;UBERON:0005056!1.97e-07!1;UBERON:0001007!2.06e-07!155;UBERON:0001555!2.06e-07!155;UBERON:0007026!2.06e-07!155;UBERON:0004911!3.02e-07!1;UBERON:0002394!8.10e-07!4;UBERON:0003928!8.10e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0006562;5.48e-18;2 | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr9:130914283..130914293,- | |short_description=p@chr9:130914283..130914293,- | ||
}} | }} |
Latest revision as of 23:08, 31 July 2015
Short description: | p@chr9:130914283..130914293, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:130914283..130914293, - |
Coexpression cluster: | C484_squamous_pharyngeal_bile_transitionalcell_Prostate_signet_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 2.31e-12 | 3 |
keratinocyte | 7.01e-08 | 5 |
stratified squamous epithelial cell | 8.97e-07 | 6 |
keratin accumulating cell | 8.97e-07 | 6 |
stratified epithelial cell | 8.97e-07 | 6 |
keratinizing barrier epithelial cell | 8.97e-07 | 6 |
epithelial fate stem cell | 8.97e-07 | 6 |
stratified epithelial stem cell | 8.97e-07 | 6 |
surface ectodermal cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.99e-10 | 14 |