FFCP PHASE1:Hg19::chr18:44832288..44832294,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:44832288..44832294,+ | |||
|coexpression_cluster_id=C1441 | |coexpression_cluster_id=C1441 | ||
|description=CAGE_peak_at_chr18:44832288..44832294,+ | |description=CAGE_peak_at_chr18:44832288..44832294,+ | ||
|id=chr18:44832288..44832294,+ | |id=chr18:44832288..44832294,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000047!5.43e-11!8;CL:0000540!1.18e-08!6;CL:0000031!1.18e-08!6;CL:0000404!1.18e-08!6;CL:0002573!1.09e-07!2;CL:0000946!7.60e-07!1;CL:0000786!7.60e-07!1;CL:0000980!7.60e-07!1 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:4960;1.15e-29;1!DOID:0070004;1.15e-29;1!DOID:2355;2.73e-29;1!DOID:74;2.21e-15;2!DOID:1287;2.35e-08;4 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0000941;2.73e-29;1!UBERON:0001785;2.73e-29;1!UBERON:0002464;2.73e-29;1!UBERON:0004904;2.73e-29;1!UBERON:0001021;2.73e-29;1!UBERON:0003714;2.21e-15;2!UBERON:0005162;2.21e-15;2!UBERON:0000122;2.21e-15;2!UBERON:0002346;2.35e-08;4!UBERON:0000923;2.35e-08;4!UBERON:0010316;2.35e-08;4!UBERON:0005291;2.35e-08;4!UBERON:0002050;6.21e-07;5!UBERON:0005423;6.21e-07;5 | |ontology_enrichment_development_v019=UBERON:0005425;2.73e-29;1!UBERON:0003056;1.04e-10;3 | ||
|ontology_enrichment_disease=DOID:4960!4.58e-07!1;DOID:0070004!4.58e-07!1;DOID:2355!4.85e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4960;1.15e-29;1!DOID:0070004;1.15e-29;1!DOID:2355;2.73e-29;1!DOID:74;2.21e-15;2!DOID:1287;2.35e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.33e-29,1;DOID:0070004,1.33e-29,1;DOID:2355,1.78e-29,1;DOID:74,1.78e-15,2;DOID:1287,2.11e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000941!5.13e-07!1;UBERON:0004904!5.13e-07!1;UBERON:0002464!5.13e-07!1;UBERON:0001021!5.13e-07!1;UBERON:0001785!5.13e-07!1;UBERON:0002134!6.43e-07!1;UBERON:0005208!6.43e-07!1;UBERON:0005946!6.43e-07!1;UBERON:0005965!6.43e-07!1;UBERON:0002078!6.43e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.73e-29;1!UBERON:0001785;2.73e-29;1!UBERON:0002464;2.73e-29;1!UBERON:0004904;2.73e-29;1!UBERON:0001021;2.73e-29;1!UBERON:0003714;2.21e-15;2!UBERON:0005162;2.21e-15;2!UBERON:0000122;2.21e-15;2!UBERON:0002346;2.35e-08;4!UBERON:0000923;2.35e-08;4!UBERON:0010316;2.35e-08;4!UBERON:0005291;2.35e-08;4!UBERON:0002050;6.21e-07;5!UBERON:0005423;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.37e-29,1;UBERON:0001785,2.37e-29,1;UBERON:0002464,2.37e-29,1;UBERON:0004904,2.37e-29,1;UBERON:0001021,2.37e-29,1;UBERON:0003902,2.37e-29,1;UBERON:0005425,2.37e-29,1;UBERON:0003714,2.05e-15,2;UBERON:0005162,2.05e-15,2;UBERON:0000122,2.05e-15,2;UBERON:0001781,2.26e-08,4 | |||
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|short_description=p@chr18:44832288..44832294,+ | |short_description=p@chr18:44832288..44832294,+ | ||
}} | }} |
Latest revision as of 01:05, 26 July 2015
Short description: | p@chr18:44832288..44832294, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:44832288..44832294, + |
Coexpression cluster: | C1441_fibrosarcoma_hereditary_lymphangiectasia_adult_bronchioalveolar_myeloma_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.37e-29 | 1 |
cranial nerve | 2.37e-29 | 1 |
nerve trunk | 2.37e-29 | 1 |
nerve connecting eye with brain | 2.37e-29 | 1 |
nerve | 2.37e-29 | 1 |
retinal neural layer | 2.37e-29 | 1 |
presumptive neural retina | 2.37e-29 | 1 |
neural tissue | 2.05e-15 | 2 |
multi cell component structure | 2.05e-15 | 2 |
neuron projection bundle | 2.05e-15 | 2 |
layer of retina | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.33e-29 | 1 |
myeloma | 1.33e-29 | 1 |
anemia | 1.78e-29 | 1 |
hematopoietic system disease | 1.78e-15 | 2 |
cardiovascular system disease | 2.11e-08 | 4 |