FFCP PHASE1:Hg19::chr2:182322070..182322155,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3676 | |EntrezGene=3676 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6140 | |HGNC=6140 | ||
|TSSclassifier=strong | |||
|UniProt=E7EP60 | |UniProt=E7EP60 | ||
|association_with_transcript=0bp_to_ENST00000233573,ENST00000465522_5end | |association_with_transcript=0bp_to_ENST00000233573,ENST00000465522_5end | ||
|cluster_id=chr2:182322070..182322155,+ | |||
|coexpression_cluster_id=C1481 | |coexpression_cluster_id=C1481 | ||
|description=CAGE_peak_1_at_ITGA4_5end | |description=CAGE_peak_1_at_ITGA4_5end | ||
|id=chr2:182322070..182322155,+ | |id=chr2:182322070..182322155,+ | ||
|ontology_enrichment_celltype=CL:0000542;4.84e-12;53!CL:0000791;2.97e-11;18!CL:0000789;2.97e-11;18!CL:0002419;2.97e-11;18!CL:0000084;1.45e-10;25!CL:0002087;1.47e-10;104!CL:0000576;1.31e-09;48!CL:0000945;3.09e-09;24!CL:0000860;1.62e-08;33!CL:0002057;1.62e-08;33!CL:0000738;2.10e-08;136!CL:0000625;3.06e-08;11!CL:0000763;3.18e-08;100!CL:0000236;4.03e-08;13!CL:0000988;5.02e-08;177!CL:0000766;6.70e-08;69!CL:0000473;2.99e-07;39!CL:0000234;2.99e-07;39 | |ontology_enrichment_celltype=CL:0000037!1.16e-46!172;CL:0000566!1.16e-46!172;CL:0000988!5.55e-44!182;CL:0002032!1.11e-42!165;CL:0000837!1.11e-42!165;CL:0000738!3.42e-37!140;CL:0000048!3.96e-37!430;CL:0000723!8.20e-36!436;CL:0000034!9.68e-36!444;CL:0002320!8.58e-34!365;CL:0000134!1.43e-33!358;CL:0002087!2.39e-32!119;CL:0002031!2.45e-32!124;CL:0000219!4.86e-29!390;CL:0000763!1.24e-21!112;CL:0000049!1.24e-21!112;CL:0000542!3.95e-20!53;CL:0000051!3.95e-20!53;CL:0000838!7.21e-20!52;CL:0000766!2.77e-14!76;CL:0002057!1.15e-13!42;CL:0000839!1.22e-13!70;CL:0000557!7.70e-13!71;CL:0002371!4.34e-12!591;CL:0002194!1.61e-11!63;CL:0000576!1.61e-11!63;CL:0000040!1.61e-11!63;CL:0000559!1.61e-11!63;CL:0000791!3.55e-11!18;CL:0000789!3.55e-11!18;CL:0002420!3.55e-11!18;CL:0002419!3.55e-11!18;CL:0000790!3.55e-11!18;CL:0002009!4.23e-11!65;CL:0000860!7.27e-11!45;CL:0000084!2.38e-10!25;CL:0000827!2.38e-10!25;CL:0000945!2.61e-09!24;CL:0000826!2.61e-09!24;CL:0000144!9.45e-09!625;CL:0000236!1.55e-08!14;CL:0000625!3.45e-08!11 | ||
| | |ontology_enrichment_celltype_v019=CL:0000542;4.84e-12;53!CL:0000791;2.97e-11;18!CL:0000789;2.97e-11;18!CL:0002419;2.97e-11;18!CL:0000084;1.45e-10;25!CL:0002087;1.47e-10;104!CL:0000576;1.31e-09;48!CL:0000945;3.09e-09;24!CL:0000860;1.62e-08;33!CL:0002057;1.62e-08;33!CL:0000738;2.10e-08;136!CL:0000625;3.06e-08;11!CL:0000763;3.18e-08;100!CL:0000236;4.03e-08;13!CL:0000988;5.02e-08;177!CL:0000766;6.70e-08;69!CL:0000473;2.99e-07;39!CL:0000234;2.99e-07;39 | ||
|ontology_enrichment_disease=DOID:8692;5.68e-07;31 | |ontology_enrichment_celltype_v019_2=CL:0000037,7.67e-50,168;CL:0000988,2.19e-47,177;CL:0002032,9.56e-46,161;CL:0000837,9.56e-46,161;CL:0000738,2.48e-40,136;CL:0000048,5.39e-39,427;CL:0000723,1.10e-37,433;CL:0000034,1.72e-37,441;CL:0002320,6.92e-36,361;CL:0000134,1.13e-35,354;CL:0002087,1.68e-35,115;CL:0002031,2.09e-35,120;CL:0000219,8.23e-31,386;CL:0000763,4.82e-24,108;CL:0000049,4.82e-24,108;CL:0000542,2.80e-20,53;CL:0000051,2.80e-20,53;CL:0000838,5.13e-20,52;CL:0000766,1.23e-16,72;CL:0000839,4.83e-16,66;CL:0000557,4.04e-15,67;CL:0002194,8.41e-14,59;CL:0000576,8.41e-14,59;CL:0000040,8.41e-14,59;CL:0000559,8.41e-14,59;CL:0000860,9.25e-14,42;CL:0002057,9.25e-14,42;CL:0000473,2.75e-13,48;CL:0000234,2.75e-13,48;CL:0002009,2.82e-13,61;CL:0000791,2.98e-11,18;CL:0000789,2.98e-11,18;CL:0002420,2.98e-11,18;CL:0002419,2.98e-11,18;CL:0000790,2.98e-11,18;CL:0000084,1.41e-10,25;CL:0000827,1.41e-10,25;CL:0000945,3.18e-09,24;CL:0000826,3.18e-09,24;CL:0000236,1.36e-08,14;CL:0000625,3.06e-08,11 | ||
|ontology_enrichment_uberon=UBERON:0002390;9.87e-08;32!UBERON:0000178;1.15e-07;15!UBERON:0000179;1.15e-07;15!UBERON:0000463;1.15e-07;15 | |ontology_enrichment_development_v019=CL:0000051;4.84e-12;53!CL:0000790;2.97e-11;18!CL:0002057;4.12e-10;42!CL:0000049;1.11e-07;108 | ||
|ontology_enrichment_disease=DOID:2531!8.53e-09!51;DOID:0060083!8.53e-09!51;DOID:1240!1.02e-07!39;DOID:8692!2.38e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.68e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.28e-09,51;DOID:0060083,7.28e-09,51;DOID:1240,7.85e-08,39;DOID:8692,2.38e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002384!4.14e-33!375;UBERON:0002390!1.34e-21!102;UBERON:0003061!1.34e-21!102;UBERON:0002193!4.47e-20!112;UBERON:0001474!4.22e-13!86;UBERON:0002371!8.09e-13!80;UBERON:0002204!7.69e-11!167;UBERON:0004765!1.30e-09!101;UBERON:0001434!1.30e-09!101;UBERON:0002405!7.34e-09!115;UBERON:0000178!1.31e-07!15;UBERON:0000179!1.31e-07!15;UBERON:0000463!1.31e-07!15;UBERON:0003081!1.92e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;9.87e-08;32!UBERON:0000178;1.15e-07;15!UBERON:0000179;1.15e-07;15!UBERON:0000463;1.15e-07;15 | |||
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| ||
|short_description=p1@ITGA4 | |short_description=p1@ITGA4 | ||
}} | }} |
Latest revision as of 21:04, 18 September 2015
Short description: | p1@ITGA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ITGA4_5end |
Coexpression cluster: | C1481_CD4_CD8_thymus_CD14CD16_CD14_granulocyte_CD19 |
Association with transcript: | 0bp_to_ENST00000233573, ENST00000465522_5end |
EntrezGene: | ITGA4 |
HGNC: | 6140 |
UniProt: | E7EP60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.91e-35 | 371 |
hematopoietic system | 3.30e-24 | 98 |
blood island | 3.30e-24 | 98 |
hemolymphoid system | 2.83e-22 | 108 |
immune system | 2.49e-16 | 93 |
bone element | 3.38e-15 | 82 |
bone marrow | 6.35e-15 | 76 |
skeletal element | 2.50e-13 | 90 |
musculoskeletal system | 2.32e-12 | 167 |
skeletal system | 3.61e-11 | 100 |
lateral plate mesoderm | 1.99e-08 | 203 |
blood | 1.18e-07 | 15 |
haemolymphatic fluid | 1.18e-07 | 15 |
organism substance | 1.18e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.28e-09 | 51 |
immune system cancer | 7.28e-09 | 51 |
leukemia | 7.85e-08 | 39 |
myeloid leukemia | 2.38e-07 | 31 |