FFCP PHASE1:Hg19::chr4:15938017..15938029,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=228bp_to_AB464521_5end | |association_with_transcript=228bp_to_AB464521_5end | ||
|cluster_id=chr4:15938017..15938029,- | |||
|coexpression_cluster_id=C4386 | |coexpression_cluster_id=C4386 | ||
|description=CAGE_peak_1_at_AB464521_5end | |description=CAGE_peak_1_at_AB464521_5end | ||
|id=chr4:15938017..15938029,- | |id=chr4:15938017..15938029,- | ||
|ontology_enrichment_celltype=CL:0002202;8.85e-23;9!CL:0002632;8.85e-23;9!CL:0000240;3.10e-19;6!CL:0000311;3.10e-19;6!CL:0000079;3.10e-19;6!CL:0000237;3.10e-19;6!CL:0002076;9.18e-19;42!CL:0002328;5.05e-18;3!CL:0000307;9.93e-18;3!CL:0002368;7.12e-16;13!CL:0002336;1.33e-13;1!CL:0002261;1.33e-13;1!CL:0002252;1.33e-13;1!CL:0002170;1.33e-13;1!CL:0000362;3.23e-13;9!CL:0000312;5.56e-11;5!CL:0002251;3.91e-10;20!CL:0002159;1.08e-08;14!CL:0000317;1.02e-07;2!CL:1000448;1.02e-07;2!CL:0002308;1.02e-07;2!CL:0002140;1.02e-07;2 | |ontology_enrichment_celltype=CL:0002076!2.67e-36!43;CL:0000223!6.67e-25!59;CL:0000066!9.11e-22!254;CL:0002202!1.83e-20!9;CL:0002632!1.83e-20!9;CL:0002368!1.18e-17!13;CL:0002251!1.95e-15!21;CL:0002159!1.20e-13!13;CL:0002328!1.34e-12!3;CL:0000068!1.96e-12!3;CL:0000069!1.96e-12!3;CL:0000307!1.96e-12!3;CL:0000377!1.96e-12!3;CL:0002621!7.00e-12!3;CL:0000076!7.01e-10!62;CL:0000575!1.55e-08!2;CL:0000220!1.33e-07!246;CL:0002321!1.75e-07!248 | ||
| | |ontology_enrichment_celltype_v019=CL:0002202;8.85e-23;9!CL:0002632;8.85e-23;9!CL:0000240;3.10e-19;6!CL:0000311;3.10e-19;6!CL:0000079;3.10e-19;6!CL:0000237;3.10e-19;6!CL:0002076;9.18e-19;42!CL:0002328;5.05e-18;3!CL:0000307;9.93e-18;3!CL:0002368;7.12e-16;13!CL:0002336;1.33e-13;1!CL:0002261;1.33e-13;1!CL:0002252;1.33e-13;1!CL:0002170;1.33e-13;1!CL:0000362;3.23e-13;9!CL:0000312;5.56e-11;5!CL:0002251;3.91e-10;20!CL:0002159;1.08e-08;14!CL:0000317;1.02e-07;2!CL:1000448;1.02e-07;2!CL:0002308;1.02e-07;2!CL:0002140;1.02e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0002076,2.89e-28,42;CL:0002202,8.85e-23,9;CL:0002632,8.85e-23,9;CL:0000223,3.61e-20,58;CL:0000240,3.20e-19,6;CL:0000311,3.20e-19,6;CL:0000079,3.20e-19,6;CL:0000237,3.20e-19,6;CL:0000036,3.20e-19,6;CL:0000357,3.20e-19,6;CL:0000114,3.20e-19,6;CL:0002328,5.05e-18,3;CL:0000068,9.94e-18,3;CL:0000069,9.94e-18,3;CL:0000307,9.94e-18,3;CL:0000377,9.94e-18,3;CL:0002368,7.13e-16,13;CL:0002252,1.42e-13,1;CL:0002336,1.61e-13,1;CL:0002261,1.61e-13,1;CL:0002170,1.61e-13,1;CL:0000362,3.17e-13,9;CL:0000312,5.29e-11,5;CL:0002251,4.41e-10,20;CL:0002159,1.06e-08,14;CL:0000066,6.54e-08,253;CL:0000317,1.05e-07,2;CL:1000448,1.05e-07,2;CL:0002308,1.05e-07,2;CL:0002140,1.05e-07,2;CL:0000076,8.38e-07,63 | ||
|ontology_enrichment_uberon=UBERON:0004815;5.05e-18;3!UBERON:0002031;5.05e-18;3!UBERON:0007196;8.53e-14;15!UBERON:0001558;8.53e-14;15!UBERON:0002185;3.36e-11;5!UBERON:0005178;1.73e-09;34!UBERON:0002224;1.73e-09;34!UBERON:0000974;3.14e-09;6!UBERON:0003729;3.76e-09;13!UBERON:0005181;2.34e-08;35!UBERON:0000485;2.99e-08;7!UBERON:0001003;3.78e-08;15!UBERON:0007376;3.78e-08;15!UBERON:0003126;3.98e-08;7!UBERON:0001005;3.98e-08;7!UBERON:0002419;1.02e-07;2!UBERON:0007771;1.02e-07;2!UBERON:0003297;1.02e-07;2!UBERON:0001821;1.02e-07;2!UBERON:0003487;1.02e-07;2!UBERON:0001820;1.02e-07;2!UBERON:0000341;1.93e-07;2!UBERON:0000165;2.42e-07;28 | |ontology_enrichment_development_v019=CL:0000357;3.10e-19;6!CL:0000114;3.10e-19;6!CL:0000377;9.93e-18;3!CL:0000223;2.06e-10;58!UBERON:0008814;1.32e-07;2!UBERON:0010056;1.32e-07;2 | ||
|ontology_enrichment_disease=DOID:1749!3.30e-15!14;DOID:305!1.21e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!3.38e-19!72;UBERON:0004119!3.13e-15!169;UBERON:0000925!3.13e-15!169;UBERON:0006595!3.13e-15!169;UBERON:0000072!1.28e-14!46;UBERON:0000161!2.18e-14!35;UBERON:0000065!5.66e-14!53;UBERON:0001007!1.29e-13!155;UBERON:0001555!1.29e-13!155;UBERON:0007026!1.29e-13!155;UBERON:0007196!9.14e-13!14;UBERON:0001558!9.14e-13!14;UBERON:0004815!1.34e-12!3;UBERON:0002031!1.34e-12!3;UBERON:0000166!2.18e-12!21;UBERON:0003729!5.38e-12!5;UBERON:0001949!7.00e-12!3;UBERON:0008947!1.16e-11!38;UBERON:0003258!1.16e-11!38;UBERON:0000165!4.34e-11!28;UBERON:0000930!4.34e-11!28;UBERON:0001557!8.76e-11!19;UBERON:0000344!4.32e-10!12;UBERON:0001737!7.53e-10!9;UBERON:0002185!1.51e-09!4;UBERON:0003102!2.61e-09!95;UBERON:0000077!4.03e-09!130;UBERON:0004921!4.21e-09!129;UBERON:0004185!4.21e-09!129;UBERON:0003343!1.10e-08!4;UBERON:0004785!1.10e-08!4;UBERON:0001444!2.08e-08!48;UBERON:0001041!7.62e-08!98;UBERON:0005178!1.64e-07!34;UBERON:0002224!1.64e-07!34;UBERON:0005181!3.00e-07!35;UBERON:0000063!5.06e-07!97;UBERON:0000064!6.11e-07!219;UBERON:0000485!6.55e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;5.05e-18;3!UBERON:0002031;5.05e-18;3!UBERON:0007196;8.53e-14;15!UBERON:0001558;8.53e-14;15!UBERON:0002185;3.36e-11;5!UBERON:0005178;1.73e-09;34!UBERON:0002224;1.73e-09;34!UBERON:0000974;3.14e-09;6!UBERON:0003729;3.76e-09;13!UBERON:0005181;2.34e-08;35!UBERON:0000485;2.99e-08;7!UBERON:0001003;3.78e-08;15!UBERON:0007376;3.78e-08;15!UBERON:0003126;3.98e-08;7!UBERON:0001005;3.98e-08;7!UBERON:0002419;1.02e-07;2!UBERON:0007771;1.02e-07;2!UBERON:0003297;1.02e-07;2!UBERON:0001821;1.02e-07;2!UBERON:0003487;1.02e-07;2!UBERON:0001820;1.02e-07;2!UBERON:0000341;1.93e-07;2!UBERON:0000165;2.42e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,5.05e-18,3;UBERON:0002031,5.05e-18,3;UBERON:0007196,8.53e-14,15;UBERON:0001558,8.53e-14,15;UBERON:0002185,3.36e-11,5;UBERON:0005178,3.29e-09,34;UBERON:0002224,3.29e-09,34;UBERON:0003729,4.26e-09,13;UBERON:0005181,6.07e-09,35;UBERON:0001003,3.74e-08,15;UBERON:0007376,3.74e-08,15;UBERON:0007383,3.74e-08,15;UBERON:0003126,3.98e-08,7;UBERON:0001005,3.98e-08,7;UBERON:0001004,9.97e-08,74;UBERON:0002419,1.05e-07,2;UBERON:0007771,1.05e-07,2;UBERON:0003297,1.05e-07,2;UBERON:0001821,1.05e-07,2;UBERON:0003487,1.05e-07,2;UBERON:0001820,1.05e-07,2;UBERON:0005089,1.05e-07,2;UBERON:0005088,1.05e-07,2;UBERON:0000341,1.75e-07,2;UBERON:0001007,2.59e-07,145;UBERON:0001555,2.59e-07,145;UBERON:0007026,2.59e-07,145;UBERON:0003102,3.16e-07,99;UBERON:0000165,4.57e-07,29;UBERON:0000930,4.57e-07,29 | |||
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|short_description=p1@AB464521 | |short_description=p1@AB464521 | ||
}} | }} |
Latest revision as of 02:47, 30 July 2015
Short description: | p1@AB464521 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB464521_5end |
Coexpression cluster: | C4386_Bronchial_Keratinocyte_Sebocyte_oral_tongue_Tracheal_Prostate |
Association with transcript: | 228bp_to_AB464521_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 5.05e-18 | 3 |
epithelium of bronchus | 5.05e-18 | 3 |
tracheobronchial tree | 8.53e-14 | 15 |
lower respiratory tract | 8.53e-14 | 15 |
bronchus | 3.36e-11 | 5 |
thoracic cavity element | 3.29e-09 | 34 |
thoracic cavity | 3.29e-09 | 34 |
mouth mucosa | 4.26e-09 | 13 |
thoracic segment organ | 6.07e-09 | 35 |
skin epidermis | 3.74e-08 | 15 |
outer epithelium | 3.74e-08 | 15 |
enveloping layer of ectoderm | 3.74e-08 | 15 |
trachea | 3.98e-08 | 7 |
respiratory airway | 3.98e-08 | 7 |
respiratory system | 9.97e-08 | 74 |
skin gland | 1.05e-07 | 2 |
epidermis gland | 1.05e-07 | 2 |
gland of integumental system | 1.05e-07 | 2 |
sebaceous gland | 1.05e-07 | 2 |
skin sebaceous gland | 1.05e-07 | 2 |
sweat gland | 1.05e-07 | 2 |
sweat gland placode | 1.05e-07 | 2 |
sebaceous gland placode | 1.05e-07 | 2 |
throat | 1.75e-07 | 2 |
digestive system | 2.59e-07 | 145 |
digestive tract | 2.59e-07 | 145 |
primitive gut | 2.59e-07 | 145 |
surface structure | 3.16e-07 | 99 |
mouth | 4.57e-07 | 29 |
stomodeum | 4.57e-07 | 29 |