FFCP PHASE1:Hg19::chr1:12677935..12677987,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:12677935..12677987,-
|short_description=p6@DHRS3
|description=CAGE_peak_6_at_DHRS3_5end
|association_with_transcript=-115bp_to_NM_004753,uc001auc.2,uc001au...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9249 | |EntrezGene=9249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17693 | |HGNC=17693 | ||
|TSSclassifier=strong | |||
|UniProt=O75911 | |UniProt=O75911 | ||
|association_with_transcript=-115bp_to_NM_004753,uc001auc.2,uc001aud.3,uc009vnm.2_5end | |||
|cluster_id=chr1:12677935..12677987,- | |||
|description=CAGE_peak_6_at_DHRS3_5end | |||
|id=chr1:12677935..12677987,- | |||
|ontology_enrichment_celltype=CL:0000222!2.32e-12!119;CL:0000183!2.50e-11!59;CL:0000187!2.78e-11!54;CL:0000192!2.21e-10!42;CL:0000514!2.21e-10!42;CL:0000680!3.34e-10!57;CL:0000056!3.34e-10!57;CL:0000355!3.34e-10!57;CL:0000393!1.34e-09!60;CL:0000211!1.34e-09!60;CL:0000359!5.43e-09!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.24e-09;32!CL:0000192;5.40e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.92e-12,121;CL:0000187,1.33e-11,55;CL:0000192,1.67e-10,43;CL:0000514,1.67e-10,43;CL:0000680,2.06e-10,58;CL:0000056,2.06e-10,58;CL:0000355,2.06e-10,58;CL:0000393,6.22e-10,61;CL:0000211,6.22e-10,61;CL:0000359,1.97e-09,32 | |||
|ontology_enrichment_development_v019=CL:0000514;5.40e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!2.49e-15!138;UBERON:0004111!2.76e-15!241;UBERON:0000477!1.03e-14!286;UBERON:0000025!2.98e-14!194;UBERON:0000119!3.09e-14!312;UBERON:0000483!3.76e-14!309;UBERON:0000475!4.13e-14!365;UBERON:0003914!4.97e-14!118;UBERON:0000481!5.34e-14!347;UBERON:0002100!6.39e-13!216;UBERON:0002385!2.29e-12!63;UBERON:0001015!2.29e-12!63;UBERON:0000383!2.29e-12!63;UBERON:0001134!6.70e-12!61;UBERON:0002036!6.70e-12!61;UBERON:0003082!6.70e-12!61;UBERON:0000468!9.41e-12!659;UBERON:0005256!1.21e-11!143;UBERON:0002049!2.42e-09!79;UBERON:0007798!2.42e-09!79;UBERON:0003104!2.43e-09!238;UBERON:0009142!2.43e-09!238;UBERON:0001981!6.34e-09!60;UBERON:0007500!6.34e-09!60;UBERON:0004537!6.34e-09!60;UBERON:0006965!6.34e-09!60;UBERON:0000467!1.94e-08!625;UBERON:0001637!2.02e-08!42;UBERON:0003509!2.02e-08!42;UBERON:0004572!2.02e-08!42;UBERON:0000055!2.34e-08!69;UBERON:0000480!3.42e-08!626;UBERON:0000922!3.94e-08!612;UBERON:0004872!6.97e-08!84;UBERON:0004290!9.40e-08!70;UBERON:0002050!4.34e-07!605;UBERON:0005423!4.34e-07!605;UBERON:0000486!6.14e-07!82;UBERON:0004573!6.38e-07!33;UBERON:0004571!6.38e-07!33;UBERON:0001009!7.70e-07!113;UBERON:0000923!8.29e-07!604;UBERON:0005291!8.29e-07!604;UBERON:0006598!8.29e-07!604;UBERON:0002532!8.29e-07!604 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,2.61e-16,122;UBERON:0003104,8.48e-16,160;UBERON:0009142,8.48e-16,160;UBERON:0002100,5.69e-15,199;UBERON:0004111,3.31e-14,240;UBERON:0003914,4.94e-14,117;UBERON:0000025,2.23e-13,192;UBERON:0000483,6.33e-13,306;UBERON:0000119,6.55e-13,309;UBERON:0002385,1.21e-12,64;UBERON:0001015,1.21e-12,64;UBERON:0000383,1.21e-12,64;UBERON:0000490,2.89e-12,148;UBERON:0001134,3.68e-12,62;UBERON:0002036,3.68e-12,62;UBERON:0003082,3.68e-12,62;UBERON:0007503,7.51e-10,78;UBERON:0002049,8.18e-09,78;UBERON:0007798,8.18e-09,78;UBERON:0007500,8.40e-09,59;UBERON:0001981,8.40e-09,59;UBERON:0004537,8.40e-09,59;UBERON:0006965,8.40e-09,59;UBERON:0001637,1.42e-08,42;UBERON:0003509,1.42e-08,42;UBERON:0004572,1.42e-08,42;UBERON:0007524,1.45e-08,73;UBERON:0003077,1.60e-08,72;UBERON:0007285,1.60e-08,72;UBERON:0002329,2.09e-08,71;UBERON:0003059,2.09e-08,71;UBERON:0007282,2.09e-08,71;UBERON:0004290,2.09e-08,71;UBERON:0009618,2.09e-08,71;UBERON:0000055,3.61e-08,68;UBERON:0004872,1.34e-07,83;UBERON:0000486,2.55e-07,83;UBERON:0004573,5.13e-07,33;UBERON:0004571,5.13e-07,33;UBERON:0009569,9.99e-07,112 | |||
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| ||
|short_description=p6@DHRS3 | |||
}} | }} |
Latest revision as of 14:30, 16 September 2015
Short description: | p6@DHRS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DHRS3_5end |
Coexpression cluster: | NA |
Association with transcript: | -115bp_to_NM_004753, uc001auc.2, uc001aud.3, uc009vnm.2_5end |
EntrezGene: | DHRS3 |
HGNC: | 17693 |
UniProt: | O75911 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.92e-12 | 121 |
muscle cell | 1.33e-11 | 55 |
smooth muscle cell | 1.67e-10 | 43 |
smooth muscle myoblast | 1.67e-10 | 43 |
muscle precursor cell | 2.06e-10 | 58 |
myoblast | 2.06e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.06e-10 | 58 |
electrically responsive cell | 6.22e-10 | 61 |
electrically active cell | 6.22e-10 | 61 |
vascular associated smooth muscle cell | 1.97e-09 | 32 |