FFCP PHASE1:Hg19::chr13:74708208..74708220,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11278 | |EntrezGene=11278 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6346 | |HGNC=6346 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WWI3,Q9Y4X4 | |UniProt=Q8WWI3,Q9Y4X4 | ||
|association_with_transcript=-142bp_to_NM_007249,uc001vjf.2,uc001vjg.3_5end | |association_with_transcript=-142bp_to_NM_007249,uc001vjf.2,uc001vjg.3_5end | ||
|cluster_id=chr13:74708208..74708220,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_12_at_KLF12_5end | |description=CAGE_peak_12_at_KLF12_5end | ||
|id=chr13:74708208..74708220,- | |id=chr13:74708208..74708220,- | ||
|ontology_enrichment_celltype=CL:0000791;2.15e-56;18!CL:0000789;2.15e-56;18!CL:0002419;2.15e-56;18!CL:0000084;1.63e-39;25!CL:0000625;3.93e-36;11!CL:0000624;1.69e-25;6!CL:0000623;1.42e-13;3!CL:0000542;3.15e-13;53!CL:0000226;4.88e-13;3!CL:0000898;4.88e-13;3!CL:0000842;4.88e-13;3!CL:0000815;5.31e-09;2!CL:0000792;5.31e-09;2!CL:0002677;5.31e-09;2 | |ontology_enrichment_celltype=CL:0000791!1.45e-18!18;CL:0000789!1.45e-18!18;CL:0002420!1.45e-18!18;CL:0002419!1.45e-18!18;CL:0000790!1.45e-18!18;CL:0000084!8.35e-14!25;CL:0000827!8.35e-14!25;CL:0000625!5.41e-12!11;CL:0000838!1.08e-09!52;CL:0000542!2.56e-09!53;CL:0000051!2.56e-09!53;CL:0000624!1.37e-07!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0000791;2.15e-56;18!CL:0000789;2.15e-56;18!CL:0002419;2.15e-56;18!CL:0000084;1.63e-39;25!CL:0000625;3.93e-36;11!CL:0000624;1.69e-25;6!CL:0000623;1.42e-13;3!CL:0000542;3.15e-13;53!CL:0000226;4.88e-13;3!CL:0000898;4.88e-13;3!CL:0000842;4.88e-13;3!CL:0000815;5.31e-09;2!CL:0000792;5.31e-09;2!CL:0002677;5.31e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.44e-57,18;CL:0000789,9.44e-57,18;CL:0002420,9.44e-57,18;CL:0002419,9.44e-57,18;CL:0000790,9.44e-57,18;CL:0000084,9.07e-40,25;CL:0000827,9.07e-40,25;CL:0000625,2.66e-36,11;CL:0000838,1.13e-27,52;CL:0000542,4.66e-27,53;CL:0000051,4.66e-27,53;CL:0000624,1.03e-25,6;CL:0002087,1.54e-16,115;CL:0000738,2.30e-14,136;CL:0000623,1.59e-13,3;CL:0000825,1.59e-13,3;CL:0000898,2.86e-13,3;CL:0000226,4.16e-13,3;CL:0000842,4.16e-13,3;CL:0000988,1.11e-11,177;CL:0000037,1.47e-11,168;CL:0002031,1.72e-11,120;CL:0000815,3.53e-09,2;CL:0000792,3.53e-09,2;CL:0002677,3.53e-09,2;CL:0002032,4.02e-09,161;CL:0000837,4.02e-09,161 | |||
|ontology_enrichment_development_v019=CL:0000790;2.15e-56;18!CL:0000051;3.15e-13;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,0.229240217243854,0,0.157421562627358,0.393364276848904,1.15148819429164,0.619264493264304,0,0,0,0,0,0,0,0.401088894940283,0.868043482863407,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,1.71007646244749,0.39783335439818,0.730656615058536,0,0,0,0.853460445133014,0,0,0,0,0,1.17447437874188,0,0,0,0,4.13090517239049,2.35806457649499,4.31763147898969,1.00311897234407,1.30368906653436,0.946895611469467,1.94826728407911,1.44833593950726,1.76763544484902,2.65840673500345,2.70803863765016,0.128091319725675,0.650296737799391,0.986627427622057,1.65810010671509,1.15921234294021,1.33457906845854,2.1403266247177,1.04535523804977,2.03956816855619,2.68254345521345,2.06176467289578,4.30133476433155,1.91139248594458,1.30216690771284,0.950452044448374,1.20460095262218,1.66382594500744,1.24930726552346,3.07810427657222,1.64225599384209,3.42731463482045,2.13952156626806,2.02754165435919,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0.103325781175765,1.18800285728205,0,0,0,0,0,0.831192346452549,0,0.30648779579902,0.45071417671979,0,0.358779271377724,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0.144781306667579,0.410952645100767,0.179060963239896,0.336255431980582,1.18218456121156,3.45004119775228,2.43851768931522,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,1.86091223510599,1.07857100409308,2.77491650288955,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0.290033387828457,0.255679882248303,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0.286249773483982,0,0.632758849437452,0.190630193923825,0,0,0,0,0.179872457583315,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,1.13929437434833,0.476463550915578,0.411362273086194,0,0,0.79312517629427,0,2.88743956579008,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0.593929361665277,0,0,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0.347249989866585,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,1.99052386215701,0,0,0.296521128680622,0,0.313265848516366,0,0,0,0.182454789215666,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0,0,0.146178634172371,0.328461828212837,0.0969890164884194,0,0,0.137041924646751,0,0.379864775735272,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,0,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0.653174720218818,0,0,1.87426823963964,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.554645257684261,0.124192805882767,0,0.249960815924213,0,0.285465333544967,0.235265819698172,0,0.434763085832475,0,0,0,0.378806010550178,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0,0,0.449803112163605,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0,0,0,0,0.464033759878494,0.796191777397232,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0,0.327609848846413,0.245772908753719,0,0.39997479170986,0,0,0,0,0,0.622077260032973,0,0.107824811396682,0,0.109209638192014,0,0.637724760305049,0,0,0,0.157723490002507,0,0,0,0.256916900385838,0,0.159633859057151,0.41023272848151,0,0.207471757392654,0.161475645631851,0,0,0,0,0.115525666150338,1.1441462864015,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.1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| ||
|short_description=p12@KLF12 | |short_description=p12@KLF12 | ||
}} | }} |
Latest revision as of 23:09, 17 September 2015
Short description: | p12@KLF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_KLF12_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -142bp_to_NM_007249, uc001vjf.2, uc001vjg.3_5end |
EntrezGene: | KLF12 |
HGNC: | 6346 |
UniProt: | Q8WWI3Q9Y4X4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.44e-57 | 18 |
alpha-beta T cell | 9.44e-57 | 18 |
immature T cell | 9.44e-57 | 18 |
mature T cell | 9.44e-57 | 18 |
immature alpha-beta T cell | 9.44e-57 | 18 |
T cell | 9.07e-40 | 25 |
pro-T cell | 9.07e-40 | 25 |
CD8-positive, alpha-beta T cell | 2.66e-36 | 11 |
lymphoid lineage restricted progenitor cell | 1.13e-27 | 52 |
lymphocyte | 4.66e-27 | 53 |
common lymphoid progenitor | 4.66e-27 | 53 |
CD4-positive, alpha-beta T cell | 1.03e-25 | 6 |
nongranular leukocyte | 1.54e-16 | 115 |
leukocyte | 2.30e-14 | 136 |
natural killer cell | 1.59e-13 | 3 |
pro-NK cell | 1.59e-13 | 3 |
naive T cell | 2.86e-13 | 3 |
single nucleate cell | 4.16e-13 | 3 |
mononuclear cell | 4.16e-13 | 3 |
hematopoietic cell | 1.11e-11 | 177 |
hematopoietic stem cell | 1.47e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 1.72e-11 | 120 |
regulatory T cell | 3.53e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.53e-09 | 2 |
naive regulatory T cell | 3.53e-09 | 2 |
hematopoietic oligopotent progenitor cell | 4.02e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.02e-09 | 161 |