FFCP PHASE1:Hg19::chr13:89681413..89681426,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:89681413..89681426,- | |||
|coexpression_cluster_id=C3388 | |coexpression_cluster_id=C3388 | ||
|description=CAGE_peak_at_chr13:89681413..89681426,- | |description=CAGE_peak_at_chr13:89681413..89681426,- | ||
|id=chr13:89681413..89681426,- | |id=chr13:89681413..89681426,- | ||
|ontology_enrichment_celltype=CL:0002566;6.62e-41;1!CL:0000148;6.65e-17;10!CL:0000147;2.18e-12;14!CL:0000149;3.26e-11;4!CL:0000097;3.10e-09;5!CL:0000710;5.59e-09;20!CL:0000075;6.72e-07;27 | |ontology_enrichment_celltype=CL:0000148!4.76e-12!10;CL:0000541!4.76e-12!10;CL:0002566!5.59e-09!1;CL:0000946!8.78e-09!1;CL:0000786!8.78e-09!1;CL:0000980!8.78e-09!1;CL:0000147!1.22e-08!14 | ||
| | |ontology_enrichment_celltype_v019=CL:0002566;6.62e-41;1!CL:0000148;6.65e-17;10!CL:0000147;2.18e-12;14!CL:0000149;3.26e-11;4!CL:0000097;3.10e-09;5!CL:0000710;5.59e-09;20!CL:0000075;6.72e-07;27 | ||
|ontology_enrichment_disease=DOID:1909;5.21e-79;2 | |ontology_enrichment_celltype_v019_2=CL:0002566,6.62e-41,1;CL:0000148,7.51e-17,10;CL:0000541,7.51e-17,10;CL:0000147,2.37e-12,14;CL:0000149,3.79e-11,4;CL:0000097,2.97e-09,5;CL:0002028,2.97e-09,5;CL:0000710,5.93e-09,20;CL:0000075,7.03e-07,27 | ||
|ontology_enrichment_uberon=UBERON:0001003;1.42e-11;15!UBERON:0007376;1.42e-11;15 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1909!4.13e-16!2;DOID:2394!1.85e-08!14;DOID:0060060!1.98e-08!1;DOID:0060061!1.98e-08!1;DOID:8691!1.98e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:1909;5.21e-79;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.49e-79,2 | |||
|ontology_enrichment_uberon=UBERON:0005383!3.31e-10!3;UBERON:0005382!3.31e-10!3;UBERON:0001874!2.46e-08!1;UBERON:0001282!3.53e-08!1;UBERON:0009842!3.53e-08!1;UBERON:0003704!3.53e-08!1;UBERON:0001171!3.53e-08!1;UBERON:0001172!3.53e-08!1;UBERON:0002119!4.08e-08!4;UBERON:0004531!4.08e-08!4;UBERON:0000369!7.19e-08!4;UBERON:0002435!7.19e-08!4;UBERON:0000204!7.19e-08!4;UBERON:0010082!7.19e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.42e-11;15!UBERON:0007376;1.42e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.34e-11,15;UBERON:0007376,1.34e-11,15;UBERON:0007383,1.34e-11,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,1.97065295158377,0,0,0.144119953416961,0,2.98440103173194,0.381988425558278,0,0,0.205654985406647,1.20137223137567,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51649117541648,1.99825733481477,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,1.97065295158377,0,0,0.144119953416961,0,2.98440103173194,0.381988425558278,0,0,0.205654985406647,1.20137223137567,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51649117541648,1.99825733481477,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:89681413..89681426,- | |short_description=p@chr13:89681413..89681426,- | ||
}} | }} |
Latest revision as of 17:25, 24 July 2015
Short description: | p@chr13:89681413..89681426, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:89681413..89681426, - |
Coexpression cluster: | C3388_melanoma_Melanocyte_Mast_leiomyoblastoma_Burkitt_small_lymphoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 6.62e-41 | 1 |
melanocyte | 7.51e-17 | 10 |
melanoblast | 7.51e-17 | 10 |
pigment cell | 2.37e-12 | 14 |
visual pigment cell | 3.79e-11 | 4 |
mast cell | 2.97e-09 | 5 |
basophil mast progenitor cell | 2.97e-09 | 5 |
neurecto-epithelial cell | 5.93e-09 | 20 |
columnar/cuboidal epithelial cell | 7.03e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.34e-11 | 15 |
outer epithelium | 1.34e-11 | 15 |
enveloping layer of ectoderm | 1.34e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.49e-79 | 2 |