FFCP PHASE1:Hg19::chr18:29077929..29077947,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1829 | |EntrezGene=1829 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3049 | |HGNC=3049 | ||
|TSSclassifier=strong | |||
|UniProt=Q14126 | |UniProt=Q14126 | ||
|association_with_transcript=-79bp_to_ENST00000261590,NM_001943,uc002kwu.3_5end | |association_with_transcript=-79bp_to_ENST00000261590,NM_001943,uc002kwu.3_5end | ||
|cluster_id=chr18:29077929..29077947,+ | |||
|coexpression_cluster_id=C2456 | |coexpression_cluster_id=C2456 | ||
|description=CAGE_peak_5_at_DSG2_5end | |description=CAGE_peak_5_at_DSG2_5end | ||
|id=chr18:29077929..29077947,+ | |id=chr18:29077929..29077947,+ | ||
|ontology_enrichment_celltype=CL:0002322;9.41e-26;5!CL:0000039;9.13e-19;7!CL:0000586;9.13e-19;7!CL:0000540;6.12e-13;6!CL:0000404;6.12e-13;6!CL:0002166;1.68e-11;3!CL:0002321;1.00e-08;15 | |ontology_enrichment_celltype=CL:0000066!3.26e-22!254;CL:0000223!1.73e-14!59;CL:0002076!7.74e-14!43;CL:0000039!9.55e-09!7;CL:0000586!9.55e-09!7;CL:0002322!1.52e-07!5;CL:0002251!2.20e-07!21 | ||
| | |ontology_enrichment_celltype_v019=CL:0002322;9.41e-26;5!CL:0000039;9.13e-19;7!CL:0000586;9.13e-19;7!CL:0000540;6.12e-13;6!CL:0000404;6.12e-13;6!CL:0002166;1.68e-11;3!CL:0002321;1.00e-08;15 | ||
|ontology_enrichment_disease=DOID:3095;1.08e-12;22!DOID:2994;1.08e-12;22!DOID:1799;1.26e-09;1!DOID:10165;1.26e-09;1!DOID:1798;1.26e-09;1 | |ontology_enrichment_celltype_v019_2=CL:0002322,5.84e-26,5;CL:0000039,8.75e-19,7;CL:0000586,8.75e-19,7;CL:0000540,4.81e-13,6;CL:0000031,4.81e-13,6;CL:0000404,4.81e-13,6;CL:0002166,1.10e-11,3;CL:0000047,6.55e-10,8 | ||
|ontology_enrichment_uberon=UBERON:0001708;7.57e-09;4!UBERON:0008895;7.57e-09;4!UBERON:0011159;3.03e-07;5 | |ontology_enrichment_development_v019=CL:0000031;6.12e-13;6!UBERON:0009117;1.15e-07;10!UBERON:0005564;1.15e-07;10 | ||
|ontology_enrichment_disease=DOID:305!6.48e-19!106;DOID:0050687!2.06e-12!143;DOID:14566!1.65e-08!239;DOID:162!3.06e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.08e-12;22!DOID:2994;1.08e-12;22!DOID:1799;1.26e-09;1!DOID:10165;1.26e-09;1!DOID:1798;1.26e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.33e-12,22;DOID:2994,1.33e-12,22;DOID:1799,1.43e-09,1;DOID:10165,1.43e-09,1;DOID:1798,1.43e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.92e-13!169;UBERON:0000925!1.92e-13!169;UBERON:0006595!1.92e-13!169;UBERON:0005911!1.24e-09!82;UBERON:0001007!1.81e-09!155;UBERON:0001555!1.81e-09!155;UBERON:0007026!1.81e-09!155;UBERON:0004921!4.97e-08!129;UBERON:0004185!4.97e-08!129;UBERON:0000077!1.06e-07!130;UBERON:0003929!1.11e-07!54;UBERON:0001048!9.31e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;7.57e-09;4!UBERON:0008895;7.57e-09;4!UBERON:0011159;3.03e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,5.51e-09,4;UBERON:0008895,5.51e-09,4;UBERON:0011159,2.36e-07,5 | |||
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|short_description=p5@DSG2 | |short_description=p5@DSG2 | ||
}} | }} |
Latest revision as of 05:06, 19 September 2015
Short description: | p5@DSG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DSG2_5end |
Coexpression cluster: | C2456_hepatoblastoma_iPS_choriocarcinoma_colon_HES3GFP_argyrophil_H9 |
Association with transcript: | -79bp_to_ENST00000261590, NM_001943, uc002kwu.3_5end |
EntrezGene: | DSG2 |
HGNC: | 3049 |
UniProt: | Q14126 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.84e-26 | 5 |
germ line cell | 8.75e-19 | 7 |
germ cell | 8.75e-19 | 7 |
neuron | 4.81e-13 | 6 |
neuroblast | 4.81e-13 | 6 |
electrically signaling cell | 4.81e-13 | 6 |
epithelial cell of Malassez | 1.10e-11 | 3 |
neuronal stem cell | 6.55e-10 | 8 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 5.51e-09 | 4 |
splanchnocranium | 5.51e-09 | 4 |
primary subdivision of cranial skeletal system | 2.36e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.33e-12 | 22 |
germ cell cancer | 1.33e-12 | 22 |
islet cell tumor | 1.43e-09 | 1 |
endocrine pancreas cancer | 1.43e-09 | 1 |
pancreatic endocrine carcinoma | 1.43e-09 | 1 |