FFCP PHASE1:Hg19::chr1:117113596..117113682,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:117113596..117113682,-
|short_description=p1@CD58
|description=CAGE_peak_1_at_CD58_5end
|association_with_transcript=0bp_to_ENST00000369487,ENST00000369489...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=965 | |EntrezGene=965 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1688 | |HGNC=1688 | ||
|TSSclassifier=strong | |||
|UniProt=B1AMW1,P19256 | |UniProt=B1AMW1,P19256 | ||
|association_with_transcript=0bp_to_ENST00000369487,ENST00000369489,ENST00000457047,ENST00000464088_5end | |||
|cluster_id=chr1:117113596..117113682,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_CD58_5end | |||
|id=chr1:117113596..117113682,- | |||
|ontology_enrichment_celltype=CL:0000037!1.16e-51!172;CL:0000566!1.16e-51!172;CL:0002032!4.80e-51!165;CL:0000837!4.80e-51!165;CL:0000738!8.47e-50!140;CL:0000988!1.26e-48!182;CL:0002031!3.37e-44!124;CL:0002087!8.87e-41!119;CL:0000763!1.44e-40!112;CL:0000049!1.44e-40!112;CL:0000766!1.34e-38!76;CL:0000557!3.28e-35!71;CL:0000839!9.61e-35!70;CL:0002009!1.00e-32!65;CL:0002194!2.13e-31!63;CL:0000576!2.13e-31!63;CL:0000040!2.13e-31!63;CL:0000559!2.13e-31!63;CL:0000860!9.44e-28!45;CL:0002057!6.36e-27!42;CL:0000134!2.81e-18!358;CL:0002320!4.98e-16!365;CL:0000219!3.63e-14!390;CL:0000063!1.95e-11!578;CL:0000838!1.16e-09!52;CL:0000542!1.19e-09!53;CL:0000051!1.19e-09!53;CL:0000048!1.93e-09!430;CL:0000723!9.01e-09!436;CL:0000034!4.63e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.39e-20;33!CL:0002057;5.39e-20;33!CL:0000473;2.71e-19;39!CL:0000234;2.71e-19;39!CL:0000576;1.55e-17;48!CL:0000766;1.45e-16;69!CL:0002087;2.00e-11;104!CL:0000738;2.65e-11;136!CL:0000763;6.29e-11;100!CL:0000988;1.15e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.59e-50,168;CL:0002032,6.26e-50,161;CL:0000837,6.26e-50,161;CL:0000738,9.14e-49,136;CL:0000988,2.32e-48,177;CL:0002031,3.20e-43,120;CL:0002087,8.17e-40,115;CL:0000763,1.24e-39,108;CL:0000049,1.24e-39,108;CL:0000766,6.64e-38,72;CL:0000557,1.62e-34,67;CL:0000839,4.69e-34,66;CL:0002009,4.61e-32,61;CL:0002194,9.78e-31,59;CL:0000576,9.78e-31,59;CL:0000040,9.78e-31,59;CL:0000559,9.78e-31,59;CL:0000473,6.26e-30,48;CL:0000234,6.26e-30,48;CL:0000860,6.36e-27,42;CL:0002057,6.36e-27,42;CL:0000134,8.49e-18,354;CL:0002320,1.41e-15,361;CL:0000219,9.91e-14,386;CL:0000838,1.16e-09,52;CL:0000542,1.19e-09,53;CL:0000051,1.19e-09,53;CL:0000048,5.50e-09,427;CL:0000723,2.46e-08,433;CL:0000034,1.21e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.50e-19;42!CL:0000049;6.01e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.28e-39!102;UBERON:0003061!2.28e-39!102;UBERON:0002193!1.03e-33!112;UBERON:0002371!8.45e-32!80;UBERON:0001474!2.80e-30!86;UBERON:0004765!9.10e-25!101;UBERON:0001434!9.10e-25!101;UBERON:0002405!1.16e-18!115;UBERON:0002384!2.07e-15!375;UBERON:0003081!1.83e-10!216;UBERON:0000178!1.18e-08!15;UBERON:0000179!1.18e-08!15;UBERON:0000463!1.18e-08!15;UBERON:0002204!1.60e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.18e-08;15!UBERON:0000179;1.18e-08;15!UBERON:0000463;1.18e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.78e-38,98;UBERON:0003061,1.78e-38,98;UBERON:0002193,9.16e-33,108;UBERON:0002371,5.52e-31,76;UBERON:0001474,2.03e-29,82;UBERON:0004765,4.02e-26,90;UBERON:0002405,3.01e-25,93;UBERON:0001434,7.75e-22,100;UBERON:0002384,5.81e-15,371;UBERON:0003081,1.84e-11,203;UBERON:0000178,1.18e-08,15;UBERON:0000179,1.18e-08,15;UBERON:0000463,1.18e-08,15;UBERON:0002204,4.82e-07,167 | |||
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| ||
|short_description=p1@CD58 | |||
}} | }} |
Latest revision as of 09:22, 16 September 2015
Short description: | p1@CD58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD58_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000369487, ENST00000369489, ENST00000457047, ENST00000464088_5end |
EntrezGene: | CD58 |
HGNC: | 1688 |
UniProt: | B1AMW1P19256 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.78e-38 | 98 |
blood island | 1.78e-38 | 98 |
hemolymphoid system | 9.16e-33 | 108 |
bone marrow | 5.52e-31 | 76 |
bone element | 2.03e-29 | 82 |
skeletal element | 4.02e-26 | 90 |
immune system | 3.01e-25 | 93 |
skeletal system | 7.75e-22 | 100 |
connective tissue | 5.81e-15 | 371 |
lateral plate mesoderm | 1.84e-11 | 203 |
blood | 1.18e-08 | 15 |
haemolymphatic fluid | 1.18e-08 | 15 |
organism substance | 1.18e-08 | 15 |
musculoskeletal system | 4.82e-07 | 167 |