FFCP PHASE1:Hg19::chr3:9932605..9932620,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:9932605..9932620,- | |||
|coexpression_cluster_id=C306 | |coexpression_cluster_id=C306 | ||
|description=CAGE_peak_at_chr3:9932605..9932620,- | |description=CAGE_peak_at_chr3:9932605..9932620,- | ||
|id=chr3:9932605..9932620,- | |id=chr3:9932605..9932620,- | ||
|ontology_enrichment_celltype=CL:0000236;2.55e-20;13!CL:0000623;1.94e-18;3!CL:0000775;2.19e-17;3!CL:0000094;3.38e-17;8!CL:0000784;4.29e-17;3!CL:0000542;3.00e-14;53!CL:0000081;1.86e-12;11!CL:0000791;3.65e-11;18!CL:0000789;3.65e-11;18!CL:0002419;3.65e-11;18!CL:0000945;1.32e-10;24!CL:0000624;2.41e-09;6!CL:0002393;8.36e-09;6!CL:0002397;8.36e-09;6!CL:0000226;2.80e-08;3!CL:0000842;2.80e-08;3!CL:0000451;2.81e-08;10!CL:0000084;7.26e-08;25!CL:0002087;2.49e-07;104 | |ontology_enrichment_celltype=CL:0000738!4.27e-35!140;CL:0000037!3.36e-27!172;CL:0000566!3.36e-27!172;CL:0000988!1.25e-25!182;CL:0002031!3.65e-25!124;CL:0000838!4.18e-24!52;CL:0000542!1.83e-23!53;CL:0000051!1.83e-23!53;CL:0002087!4.13e-23!119;CL:0002032!5.15e-22!165;CL:0000837!5.15e-22!165;CL:0000791!9.66e-17!18;CL:0000789!9.66e-17!18;CL:0002420!9.66e-17!18;CL:0002419!9.66e-17!18;CL:0000790!9.66e-17!18;CL:0000084!2.04e-12!25;CL:0000827!2.04e-12!25;CL:0002393!3.09e-11!9;CL:0002397!3.09e-11!9;CL:0000624!5.35e-11!6;CL:0000134!9.96e-11!358;CL:0002320!3.88e-10!365;CL:0000625!2.93e-09!11;CL:0000945!4.66e-09!24;CL:0000826!4.66e-09!24;CL:0000766!8.89e-09!76;CL:0000034!1.20e-08!444;CL:0000094!3.47e-08!8;CL:0000048!4.11e-08!430;CL:0000219!4.24e-08!390;CL:0000723!1.01e-07!436;CL:0000236!1.71e-07!14;CL:0000623!5.16e-07!3;CL:0000825!5.16e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000236;2.55e-20;13!CL:0000623;1.94e-18;3!CL:0000775;2.19e-17;3!CL:0000094;3.38e-17;8!CL:0000784;4.29e-17;3!CL:0000542;3.00e-14;53!CL:0000081;1.86e-12;11!CL:0000791;3.65e-11;18!CL:0000789;3.65e-11;18!CL:0002419;3.65e-11;18!CL:0000945;1.32e-10;24!CL:0000624;2.41e-09;6!CL:0002393;8.36e-09;6!CL:0002397;8.36e-09;6!CL:0000226;2.80e-08;3!CL:0000842;2.80e-08;3!CL:0000451;2.81e-08;10!CL:0000084;7.26e-08;25!CL:0002087;2.49e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.18e-31,136;CL:0000838,8.40e-25,52;CL:0000542,2.87e-24,53;CL:0000051,2.87e-24,53;CL:0000037,3.45e-24,168;CL:0000988,1.16e-22,177;CL:0002087,6.42e-19,115;CL:0000236,8.08e-19,14;CL:0000623,2.06e-18,3;CL:0000825,2.06e-18,3;CL:0002032,3.04e-18,161;CL:0000837,3.04e-18,161;CL:0000775,2.14e-17,3;CL:0000094,3.44e-17,8;CL:0000784,3.95e-17,3;CL:0002031,3.26e-16,120;CL:0000081,1.89e-12,11;CL:0000791,3.62e-11,18;CL:0000789,3.62e-11,18;CL:0002420,3.62e-11,18;CL:0002419,3.62e-11,18;CL:0000790,3.62e-11,18;CL:0000945,1.30e-10,24;CL:0000826,1.30e-10,24;CL:0000624,2.38e-09,6;CL:0000134,3.30e-09,354;CL:0002320,6.56e-09,361;CL:0000451,2.71e-08,10;CL:0000226,3.13e-08,3;CL:0000842,3.13e-08,3;CL:0000084,7.22e-08,25;CL:0000827,7.22e-08,25;CL:0000219,7.39e-08,386;CL:0000034,1.27e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000051;3.00e-14;53!CL:0000790;3.65e-11;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.43e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.68e-08,371 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.0787107813136792,0.393364276848904,0,2.32224184974114,0,0,0,0,0,0.880801318004542,1.66198622559563,1.80490002723128,3.03815219002193,0,0,0,0,0,0,0.697287110717054,0,0.619412741790207,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0.422510572623884,0.212604299965044,0.419317291016752,0.112328631146495,0,0.16072558669708,0.285012743741249,0,0.182664153764634,1.75996244461323,1.09227722252426,0,2.13365111283254,0,0,1.32208974556972,0,13.0918982895173,2.93618594685469,8.02773779062981,1.32171328579026,2.24203425192614,0.263384084775077,3.34406609193516,6.6811829667358,7.81285696198135,0.501559486172034,0.977766799900771,0.946895611469467,0,0.334231370655521,0.294605907474837,0.443067789167242,0.812411591295047,0.128091319725675,0.520237390239513,0,0.552700035571697,0,0.593146252648242,0.267540828089713,0,0,0.383220493601921,3.09264700934367,1.01207876807801,0,0,0.950452044448374,0.301150238155546,0.127986611154418,0,0.236777252044017,0.821127996921047,5.24177532384304,5.61624411145365,5.93780055919476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66943437013739,3.43196946468077,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0.985326475791887,0,0.621984346622316,0.720599767084807,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,4.3346767244424,11.4282614675544,10.3957859386596,0,0,0,0,0,1.49801404789436,11.966458368161,1.24324654030811,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.620304078368662,2.5885704098234,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19472429772959,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0.0846733320657845,0,0,0,0.137539436597234,0,0.2249738915515,4.6428117273477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.0787107813136792,0.393364276848904,0,2.32224184974114,0,0,0,0,0,0.880801318004542,1.66198622559563,1.80490002723128,3.03815219002193,0,0,0,0,0,0,0.697287110717054,0,0.619412741790207,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0.422510572623884,0.212604299965044,0.419317291016752,0.112328631146495,0,0.16072558669708,0.285012743741249,0,0.182664153764634,1.75996244461323,1.09227722252426,0,2.13365111283254,0,0,1.32208974556972,0,13.0918982895173,2.93618594685469,8.02773779062981,1.32171328579026,2.24203425192614,0.263384084775077,3.34406609193516,6.6811829667358,7.81285696198135,0.501559486172034,0.977766799900771,0.946895611469467,0,0.334231370655521,0.294605907474837,0.443067789167242,0.812411591295047,0.128091319725675,0.520237390239513,0,0.552700035571697,0,0.593146252648242,0.267540828089713,0,0,0.383220493601921,3.09264700934367,1.01207876807801,0,0,0.950452044448374,0.301150238155546,0.127986611154418,0,0.236777252044017,0.821127996921047,5.24177532384304,5.61624411145365,5.93780055919476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66943437013739,3.43196946468077,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0.985326475791887,0,0.621984346622316,0.720599767084807,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,4.3346767244424,11.4282614675544,10.3957859386596,0,0,0,0,0,1.49801404789436,11.966458368161,1.24324654030811,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.620304078368662,2.5885704098234,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19472429772959,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0.0846733320657845,0,0,0,0.137539436597234,0,0.2249738915515,4.6428117273477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:9932605..9932620,- | |short_description=p@chr3:9932605..9932620,- | ||
}} | }} |
Latest revision as of 00:11, 30 July 2015
Short description: | p@chr3:9932605..9932620, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:9932605..9932620, - |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.68e-08 | 371 |