FFCP PHASE1:Hg19::chr5:150970796..150970815,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2196 | |EntrezGene=2196 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3596 | |HGNC=3596 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=62bp_to_AK308619_5end | |association_with_transcript=62bp_to_AK308619_5end | ||
|cluster_id=chr5:150970796..150970815,- | |||
|coexpression_cluster_id=C2816 | |coexpression_cluster_id=C2816 | ||
|description=CAGE_peak_2_at_FAT2_5end | |description=CAGE_peak_2_at_FAT2_5end | ||
|id=chr5:150970796..150970815,- | |id=chr5:150970796..150970815,- | ||
|ontology_enrichment_celltype=CL:0002368;1.90e-20;13!CL:0002076;2.82e-17;42!CL:0000244;2.09e-15;4!CL:0000731;2.09e-15;4!CL:0000307;5.08e-11;3!CL:0002202;1.24e-09;9!CL:0002632;1.24e-09;9!CL:0000575;1.00e-08;2!CL:0002251;2.83e-08;20 | |ontology_enrichment_celltype=CL:0002076!2.66e-23!43;CL:0000223!3.06e-16!59;CL:0002368!1.36e-12!13;CL:0002251!7.95e-12!21;CL:0002159!7.24e-10!13;CL:0000622!5.35e-09!5;CL:0000244!2.24e-08!4;CL:0000731!2.24e-08!4;CL:0000066!1.49e-07!254;CL:0000154!2.09e-07!6;CL:0002202!6.90e-07!9;CL:0002632!6.90e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0002368;1.90e-20;13!CL:0002076;2.82e-17;42!CL:0000244;2.09e-15;4!CL:0000731;2.09e-15;4!CL:0000307;5.08e-11;3!CL:0002202;1.24e-09;9!CL:0002632;1.24e-09;9!CL:0000575;1.00e-08;2!CL:0002251;2.83e-08;20 | ||
|ontology_enrichment_disease=DOID:1749;1.17e-15;14 | |ontology_enrichment_celltype_v019_2=CL:0002076,7.18e-21,42;CL:0002368,2.75e-20,13;CL:0000223,5.78e-16,58;CL:0000244,3.15e-15,4;CL:0000731,3.15e-15,4;CL:0000066,1.09e-12,253;CL:0000068,5.88e-11,3;CL:0000069,5.88e-11,3;CL:0000307,5.88e-11,3;CL:0000377,5.88e-11,3;CL:0002202,1.74e-09,9;CL:0002632,1.74e-09,9;CL:0000575,8.49e-09,2;CL:0002251,2.14e-08,20 | ||
|ontology_enrichment_uberon=UBERON:0000365;5.67e-19;5!UBERON:0005910;9.26e-16;6!UBERON:0000486;1.94e-14;12!UBERON:0006562;1.76e-08;2!UBERON:0004733;9.94e-08;12!UBERON:0002028;9.94e-08;12!UBERON:0004732;4.18e-07;13!UBERON:0002680;4.34e-07;9!UBERON:0001895;4.34e-07;9!UBERON:0000165;5.45e-07;28 | |ontology_enrichment_development_v019=UBERON:0006215;6.96e-13;3!CL:0000377;5.08e-11;3!CL:0000223;5.61e-09;58 | ||
|ontology_enrichment_disease=DOID:1749!1.09e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.17e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.32e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0000166!1.05e-15!21;UBERON:0000161!4.07e-15!35;UBERON:0001004!1.75e-13!72;UBERON:0000165!2.31e-12!28;UBERON:0000930!2.31e-12!28;UBERON:0000153!6.64e-12!129;UBERON:0007811!6.64e-12!129;UBERON:0007023!1.40e-10!115;UBERON:0001044!3.72e-10!6;UBERON:0003293!3.72e-10!6;UBERON:0003294!3.72e-10!6;UBERON:0010047!3.72e-10!6;UBERON:0000167!3.72e-10!6;UBERON:0000365!3.81e-10!5;UBERON:0000033!5.69e-10!123;UBERON:0003408!1.41e-09!10;UBERON:0001444!2.21e-09!48;UBERON:0003102!2.42e-09!95;UBERON:0004119!3.27e-09!169;UBERON:0000925!3.27e-09!169;UBERON:0006595!3.27e-09!169;UBERON:0004121!5.98e-09!169;UBERON:0000924!1.73e-08!173;UBERON:0006601!1.73e-08!173;UBERON:0004733!1.96e-08!12;UBERON:0002028!1.96e-08!12;UBERON:0007277!1.96e-08!12;UBERON:0005910!2.43e-08!6;UBERON:0003076!5.01e-08!15;UBERON:0003057!5.01e-08!15;UBERON:0000078!8.96e-08!18;UBERON:0004732!1.17e-07!13;UBERON:0000974!3.41e-07!10;UBERON:0000369!4.10e-07!4;UBERON:0002435!4.10e-07!4;UBERON:0000204!4.10e-07!4;UBERON:0010082!4.10e-07!4;UBERON:0002680!5.54e-07!9;UBERON:0001895!5.54e-07!9;UBERON:0010092!5.54e-07!9;UBERON:0007196!6.59e-07!14;UBERON:0001558!6.59e-07!14;UBERON:0000065!6.77e-07!53;UBERON:0006562!8.41e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;5.67e-19;5!UBERON:0005910;9.26e-16;6!UBERON:0000486;1.94e-14;12!UBERON:0006562;1.76e-08;2!UBERON:0004733;9.94e-08;12!UBERON:0002028;9.94e-08;12!UBERON:0004732;4.18e-07;13!UBERON:0002680;4.34e-07;9!UBERON:0001895;4.34e-07;9!UBERON:0000165;5.45e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,8.92e-19,5;UBERON:0005910,1.34e-15,6;UBERON:0001004,7.69e-10,74;UBERON:0000166,2.50e-09,22;UBERON:0004119,8.46e-09,160;UBERON:0000925,8.46e-09,160;UBERON:0006595,8.46e-09,160;UBERON:0000161,2.95e-08,36;UBERON:0004733,9.83e-08,12;UBERON:0002028,9.83e-08,12;UBERON:0007277,9.83e-08,12;UBERON:0002680,3.77e-07,9;UBERON:0001895,3.77e-07,9;UBERON:0010092,3.77e-07,9;UBERON:0004732,4.13e-07,13;UBERON:0000033,8.35e-07,56;UBERON:0000065,8.73e-07,54;UBERON:0000165,9.16e-07,29;UBERON:0000930,9.16e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,2.10844143144775,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,2.91436230634034,3.33705998505986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,1.90922284413584,2.29443676311203,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75600456653801,0,0.603173834469785,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0.93733833986777,1.34385702559088,1.27597587518148,1.25381931783988,1.16253575405585,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20557117333613,0.644566922551274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,1.65284915360978,1.15314040419064,2.93509238737543,1.4162089319777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82822014178473,1.34060455107157,1.08890984861323,0,1.29151611801369,10.1082885400575,2.21715076768338,2.06751060186264,0,0,0,0,0,0,0,0,0,0,2.69544237579135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,2.95862965542299,0,0,0,0,0,0.885741385813839,1.68835014075571,6.10326945268333,12.3848771122972,14.4818333287238,0.438770794307945,0,7.80772967960178,0.461701551022782,0,3.4584585658209,4.57763986489838,1.08647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.347119476670262,2.05784034570193,1.04471047896483,0.17472666824203,0,0,0,0,1.64881328030313,0,0.677942222341597,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,1.88555227693436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,4.02521625119119,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,1.10929051536852,0.18628920882415,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0,0,0.0691572524642179,0,0,0,0.825788063434183,8.62114413051891,0.346576998451015,0,0,0,0.0752103283492573,0,0,5.23813388962845,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,1.48863353516788,0,7.53798323073612,0,0,0,0,0.177404740325278,0,0,1.83518279037446,0,0,0,0.863424021355654,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0,0,2.27937780579341,1.87790324803345,0.691259661814092,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,2.4285549652957,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0.4226557275834,0,0,0,0,2.49975514047921,1.05868461514708,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.852935927603924,0.23806443146374,0.387533459016037,0.124149428591716,0,0,0,1.74173398317569,1.02669990325584,1.54909721933551,0.717222053926764,0.332660356546013,3.25613074443898,0,0,0,0,0,0.406896178315738,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,2.10844143144775,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,2.91436230634034,3.33705998505986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,1.90922284413584,2.29443676311203,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75600456653801,0,0.603173834469785,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0.93733833986777,1.34385702559088,1.27597587518148,1.25381931783988,1.16253575405585,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20557117333613,0.644566922551274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,1.65284915360978,1.15314040419064,2.93509238737543,1.4162089319777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82822014178473,1.34060455107157,1.08890984861323,0,1.29151611801369,10.1082885400575,2.21715076768338,2.06751060186264,0,0,0,0,0,0,0,0,0,0,2.69544237579135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,2.95862965542299,0,0,0,0,0,0.885741385813839,1.68835014075571,6.10326945268333,12.3848771122972,14.4818333287238,0.438770794307945,0,7.80772967960178,0.461701551022782,0,3.4584585658209,4.57763986489838,1.08647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.347119476670262,2.05784034570193,1.04471047896483,0.17472666824203,0,0,0,0,1.64881328030313,0,0.677942222341597,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,1.88555227693436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,4.02521625119119,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,1.10929051536852,0.18628920882415,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0,0,0.0691572524642179,0,0,0,0.825788063434183,8.62114413051891,0.346576998451015,0,0,0,0.0752103283492573,0,0,5.23813388962845,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,1.48863353516788,0,7.53798323073612,0,0,0,0,0.177404740325278,0,0,1.83518279037446,0,0,0,0.863424021355654,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0,0,2.27937780579341,1.87790324803345,0.691259661814092,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,2.4285549652957,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0.4226557275834,0,0,0,0,2.49975514047921,1.05868461514708,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.852935927603924,0.23806443146374,0.387533459016037,0.124149428591716,0,0,0,1.74173398317569,1.02669990325584,1.54909721933551,0.717222053926764,0.332660356546013,3.25613074443898,0,0,0,0,0,0.406896178315738,0,0.402547587182052,0 | ||
|short_description=p2@FAT2 | |short_description=p2@FAT2 | ||
}} | }} |
Latest revision as of 09:20, 16 September 2015
Short description: | p2@FAT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAT2_5end |
Coexpression cluster: | C2816_cerebellum_oral_Urothelial_Small_keratoacanthoma_cervical_squamous |
Association with transcript: | 62bp_to_AK308619_5end |
EntrezGene: | FAT2 |
HGNC: | 3596 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.18e-21 | 42 |
respiratory epithelial cell | 2.75e-20 | 13 |
endodermal cell | 5.78e-16 | 58 |
transitional epithelial cell | 3.15e-15 | 4 |
urothelial cell | 3.15e-15 | 4 |
epithelial cell | 1.09e-12 | 253 |
duct epithelial cell | 5.88e-11 | 3 |
branched duct epithelial cell | 5.88e-11 | 3 |
tracheal epithelial cell | 5.88e-11 | 3 |
tracheoblast | 5.88e-11 | 3 |
epithelial cell of tracheobronchial tree | 1.74e-09 | 9 |
epithelial cell of lower respiratory tract | 1.74e-09 | 9 |
corneal epithelial cell | 8.49e-09 | 2 |
epithelial cell of alimentary canal | 2.14e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
urothelium | 8.92e-19 | 5 |
transitional epithelium | 1.34e-15 | 6 |
respiratory system | 7.69e-10 | 74 |
oral opening | 2.50e-09 | 22 |
endoderm-derived structure | 8.46e-09 | 160 |
endoderm | 8.46e-09 | 160 |
presumptive endoderm | 8.46e-09 | 160 |
orifice | 2.95e-08 | 36 |
segmental subdivision of hindbrain | 9.83e-08 | 12 |
hindbrain | 9.83e-08 | 12 |
presumptive hindbrain | 9.83e-08 | 12 |
regional part of metencephalon | 3.77e-07 | 9 |
metencephalon | 3.77e-07 | 9 |
future metencephalon | 3.77e-07 | 9 |
segmental subdivision of nervous system | 4.13e-07 | 13 |
head | 8.35e-07 | 56 |
respiratory tract | 8.73e-07 | 54 |
mouth | 9.16e-07 | 29 |
stomodeum | 9.16e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.32e-15 | 14 |