FFCP PHASE1:Hg19::chr10:31608127..31608156,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6935 | |EntrezGene=6935 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11642 | |HGNC=11642 | ||
|TSSclassifier=strong | |||
|UniProt=F6TDF5,Q5VZ84,F5H8J0,F5H4I8,F5H838 | |UniProt=F6TDF5,Q5VZ84,F5H8J0,F5H4I8,F5H838 | ||
|association_with_transcript=0bp_to_ENST00000424869,ENST00000437844,ENST00000483752,ENST00000541037,ENST00000542815,ENST00000543514,ENST00000558440,ENST00000559858,ENST00000560721_5end | |association_with_transcript=0bp_to_ENST00000424869,ENST00000437844,ENST00000483752,ENST00000541037,ENST00000542815,ENST00000543514,ENST00000558440,ENST00000559858,ENST00000560721_5end | ||
|cluster_id=chr10:31608127..31608156,+ | |||
|description=CAGE_peak_1_at_ZEB1_5end | |description=CAGE_peak_1_at_ZEB1_5end | ||
|id=chr10:31608127..31608156,+ | |id=chr10:31608127..31608156,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000057!9.05e-08!75 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.43e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.22e-14!115;UBERON:0000073!2.48e-07!94;UBERON:0001016!2.48e-07!94;UBERON:0001049!3.10e-07!57;UBERON:0005068!3.10e-07!57;UBERON:0006241!3.10e-07!57;UBERON:0007135!3.10e-07!57;UBERON:0001017!3.36e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.06e-14,114;UBERON:0001016,5.25e-08,89;UBERON:0001049,2.92e-07,56;UBERON:0005068,2.92e-07,56;UBERON:0006241,2.92e-07,56;UBERON:0007135,2.92e-07,56;UBERON:0001017,3.55e-07,81 | |||
|phase1_expression=43.9661677834747,38.9662953481589,50.7435854745496,24.0175916047513,27.2646267600646,33.148863915814,22.796989035148,29.0591141776342,12.5369101535922,3.19454117451962,0,0.218441372130172,0.527533956456907,29.5801583574511,16.9012661621237,34.9609076154923,32.5455045132948,24.1002329827833,23.9087071407348,8.24911089114479,2.44800829493104,4.70182082217132,60.395793284653,24.5005220880463,42.8100401018278,30.9474293279203,26.7647921606823,24.4003422072406,16.521299627654,17.2723229143746,16.255692948188,0,0,0,15.3385057148997,20.7567079431635,11.7440175733939,9.97191735357379,13.4364779804995,15.6247826915413,0.895661896959697,5.50619232232265,0.77272670290256,1.01778767145695,3.02300754951048,2.91100873425379,2.55671940596253,4.11167888021826,2.47765096716083,0.863077176966451,4.09857130446561,2.83778675866302,0.344745680736619,3.22742341791913,4.06279459783025,2.07066573496865,4.91231070104122,2.47195832889593,2.14258724659632,4.17207735198922,3.19668562899521,0.329851300186716,0.997318288108159,2.98357325372886,0.870627715885752,4.53908179752912,3.73693349397345,2.00998932205395,2.08593167368081,3.47502151528187,9.08099253950053,4.05105399586321,2.53169909952708,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,19.3595868907455,21.8455444504853,20.4587128388618,26.4572737991234,17.2170274425485,22.4153451582248,14.542987201267,19.0810750907073,71.7208341077905,85.1493924587861,75.3078259406701,17.1822727152734,51.5667877943013,8.16490662802739,112.124568964885,118.296239587499,73.3997351428248,33.6044855735263,83.1101779915655,65.3357971913932,66.2410876586898,35.8741671170259,63.34027010709,57.3772786971579,90.1776866337502,19.8541545574796,23.6708012558978,26.8033784503992,20.1735512983669,48.9767214892239,80.5196037969988,92.301585690951,62.7213142829861,36.1456803205236,54.8005305850747,43.9843130217766,74.6408091457533,22.2995790026868,22.1368374311182,16.1576847556224,30.5667491727879,35.3243046786195,36.2299107001803,26.7558294809739,21.3493279199472,72.7800343041284,50.2787568072994,89.9359548112182,36.5710299470943,12.0726154746655,17.0057207251895,23.8549840573814,10.5280961233537,19.699126578672,28.6302940938396,13.1391414981712,28.8331192350407,19.5121869767056,18.6209745669427,11.7226272570453,0,0,1.29818957461873,1.74129737299267,2.26028532882071,32.6732155298319,23.4517913419852,31.573887613013,21.0688151808707,14.6239881168041,11.108496051443,19.2204700254163,9.64848703282784,29.4376304875872,15.465627523724,45.7397663729712,48.0284454627059,63.931637038052,14.0990260988201,15.2054421143703,11.2268546472158,23.8981002224815,16.2028389576352,58.6699214826404,46.253050760991,41.2158018568959,7.66583187329416,7.59412527654503,21.0682005519968,110.695550646293,127.967487168947,0,23.35768172968,35.4565432660823,45.1515306573076,75.438031256938,33.6934963088439,12.3349072031308,6.4049397437823,8.38669664618344,27.6977821505792,28.1545304625648,26.3173664012669,18.9196784556164,51.8558332031999,9.60717870518566,18.7296046098192,18.8255701109668,18.3821877078715,36.8744325741422,35.1264289278845,34.2699968353486,54.9174720675663,25.5495380008477,68.9182960442356,47.5201142912821,23.7376252107415,3.64064544775211,2.87447256726495,44.9457424257357,39.0369782000528,74.8073111807294,32.0453663243012,9.80760946556863,12.6199969481541,15.0864803602828,43.2329022010157,36.518313487975,51.9233157840927,42.3128445479007,90.170963083634,35.0391134462056,26.8008273117489,63.4599009227161,50.1800576580173,44.6807780412083,55.3219890840219,88.0971009662525,39.4060647693442,44.1294190237064,15.4300139002544,0.57978255948989,1.09098448236334,0.286804595389004,0.609868530647977,0.662648841607426,3.25343040034651,8.18922334621426,1.51392510525377,1.09493207722749,10.9514672630871,13.5080597020506,12.4321429217232,34.8275946023984,24.5439023767659,6.27026040211173,7.58631105351458,6.26628677697053,7.61028411853518,6.10062443458737,7.59265981155509,6.87639671616838,5.69042248863504,8.0796902958742,10.3341763647451,0,2.4694440679884,1.47008711385542,12.6755034821831,17.6908899001973,15.9513274803979,64.0121494151243,0,20.7597050461216,0,0,0,0,10.1000574646201,4.15973914111831,11.5465073620219,18.7807256059624,19.2550258546748,15.591576358196,9.25971025153221,25.4940563994362,0,0,0,0.234004265139238,0.297262324577456,0.93733833986777,2.18376766658517,1.27597587518148,1.97028749946266,0.581267877027924,0,0.492663237895943,0.088048434013226,1.4512968087854,1.44119953416961,2.77733353538036,1.46045156871989,0,0,8.55362230113526,1.43958489784653,0,0,11.6616327719175,9.59112151433216,28.5285931843496,20.0371159424556,10.7296933755565,17.751357803676,26.3278735419022,18.7213386440459,6.17297698229141,4.25547396069835,4.52917704327369,57.3341754569172,11.9376753186117,8.23240336780769,25.0816861906176,51.8872245164117,15.8390374586686,13.2633325906218,13.9445353376047,11.2969480035724,0,0,0,17.0133647399024,18.3779097334582,64.1866072683233,59.9394609603778,34.9309748335652,43.8699359937744,7.9580452235404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| ||
|short_description=p1@ZEB1 | |short_description=p1@ZEB1 | ||
}} | }} |
Latest revision as of 23:03, 17 September 2015
Short description: | p1@ZEB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZEB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000424869, ENST00000437844, ENST00000483752, ENST00000541037, ENST00000542815, ENST00000543514, ENST00000558440, ENST00000559858, ENST00000560721_5end |
EntrezGene: | ZEB1 |
HGNC: | 11642 |
UniProt: | F6TDF5Q5VZ84F5H8J0F5H4I8F5H838 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.43e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.06e-14 | 114 |
nervous system | 5.25e-08 | 89 |
neural tube | 2.92e-07 | 56 |
neural rod | 2.92e-07 | 56 |
future spinal cord | 2.92e-07 | 56 |
neural keel | 2.92e-07 | 56 |
central nervous system | 3.55e-07 | 81 |