FFCP PHASE1:Hg19::chr8:42698292..42698321,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55145 | |EntrezGene=55145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20856 | |HGNC=20856 | ||
|TSSclassifier=strong | |||
|UniProt=E9PIS9 | |UniProt=E9PIS9 | ||
|association_with_transcript=22bp_to_ENST00000529779_5end | |association_with_transcript=22bp_to_ENST00000529779_5end | ||
|cluster_id=chr8:42698292..42698321,- | |||
|coexpression_cluster_id=C179 | |coexpression_cluster_id=C179 | ||
|description=CAGE_peak_8_at_THAP1_5end | |description=CAGE_peak_8_at_THAP1_5end | ||
|id=chr8:42698292..42698321,- | |id=chr8:42698292..42698321,- | ||
|ontology_enrichment_celltype=CL:0002032;7.62e-26;1!CL:0000557;7.62e-26;1!CL:0000319;7.62e-26;1!CL:0000236;5.10e-18;13!CL:0000159;1.21e-13;2!CL:0000945;4.35e-10;24!CL:0000542;1.55e-07;53 | |ontology_enrichment_celltype=CL:0000838!1.71e-07!52;CL:0000542!3.21e-07!53;CL:0000051!3.21e-07!53 | ||
| | |ontology_enrichment_celltype_v019=CL:0002032;7.62e-26;1!CL:0000557;7.62e-26;1!CL:0000319;7.62e-26;1!CL:0000236;5.10e-18;13!CL:0000159;1.21e-13;2!CL:0000945;4.35e-10;24!CL:0000542;1.55e-07;53 | ||
|ontology_enrichment_disease=DOID:3030;7.62e-26;1 | |ontology_enrichment_celltype_v019_2=CL:0000319,4.61e-26,1;CL:0000236,8.70e-17,14;CL:0000159,9.40e-14,2;CL:0000945,4.35e-10,24;CL:0000826,4.35e-10,24;CL:0000838,4.14e-08,52;CL:0000542,5.79e-08,53;CL:0000051,5.79e-08,53 | ||
|ontology_enrichment_uberon=UBERON:0000941;7.62e-26;1!UBERON:0001785;7.62e-26;1!UBERON:0002464;7.62e-26;1!UBERON:0004904;7.62e-26;1!UBERON:0001021;7.62e-26;1!UBERON:0003714;1.21e-13;2!UBERON:0005162;1.21e-13;2!UBERON:0000122;1.21e-13;2!UBERON:0001896;1.53e-09;3!UBERON:0005290;1.53e-09;3!UBERON:0004732;1.47e-08;13 | |ontology_enrichment_development_v019=UBERON:0005425;7.62e-26;1!UBERON:0003056;1.53e-09;3!CL:0000051;1.55e-07;53 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;7.62e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,4.61e-26,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.62e-26;1!UBERON:0001785;7.62e-26;1!UBERON:0002464;7.62e-26;1!UBERON:0004904;7.62e-26;1!UBERON:0001021;7.62e-26;1!UBERON:0003714;1.21e-13;2!UBERON:0005162;1.21e-13;2!UBERON:0000122;1.21e-13;2!UBERON:0001896;1.53e-09;3!UBERON:0005290;1.53e-09;3!UBERON:0004732;1.47e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.93e-26,1;UBERON:0001785,5.93e-26,1;UBERON:0002464,5.93e-26,1;UBERON:0004904,5.93e-26,1;UBERON:0001021,5.93e-26,1;UBERON:0003902,5.93e-26,1;UBERON:0005425,5.93e-26,1;UBERON:0003714,1.07e-13,2;UBERON:0005162,1.07e-13,2;UBERON:0000122,1.07e-13,2;UBERON:0001896,1.81e-09,3;UBERON:0005290,1.81e-09,3;UBERON:0010096,1.81e-09,3;UBERON:0004732,1.53e-08,13;UBERON:0001781,1.69e-07,4 | |||
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| ||
|short_description=p8@THAP1 | |short_description=p8@THAP1 | ||
}} | }} |
Latest revision as of 08:26, 18 September 2015
Short description: | p8@THAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_THAP1_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | 22bp_to_ENST00000529779_5end |
EntrezGene: | THAP1 |
HGNC: | 20856 |
UniProt: | E9PIS9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 4.61e-26 | 1 |
B cell | 8.70e-17 | 14 |
seromucus secreting cell | 9.40e-14 | 2 |
lymphocyte of B lineage | 4.35e-10 | 24 |
pro-B cell | 4.35e-10 | 24 |
lymphoid lineage restricted progenitor cell | 4.14e-08 | 52 |
lymphocyte | 5.79e-08 | 53 |
common lymphoid progenitor | 5.79e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.93e-26 | 1 |
cranial nerve | 5.93e-26 | 1 |
nerve trunk | 5.93e-26 | 1 |
nerve connecting eye with brain | 5.93e-26 | 1 |
nerve | 5.93e-26 | 1 |
retinal neural layer | 5.93e-26 | 1 |
presumptive neural retina | 5.93e-26 | 1 |
neural tissue | 1.07e-13 | 2 |
multi cell component structure | 1.07e-13 | 2 |
neuron projection bundle | 1.07e-13 | 2 |
medulla oblongata | 1.81e-09 | 3 |
myelencephalon | 1.81e-09 | 3 |
future myelencephalon | 1.81e-09 | 3 |
segmental subdivision of nervous system | 1.53e-08 | 13 |
layer of retina | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 4.61e-26 | 1 |