FFCP PHASE1:Hg19::chr12:54446974..54447007,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:54446974..54447007,+ | |||
|coexpression_cluster_id=C782 | |coexpression_cluster_id=C782 | ||
|description=CAGE_peak_at_chr12:54446974..54447007,+ | |description=CAGE_peak_at_chr12:54446974..54447007,+ | ||
|id=chr12:54446974..54447007,+ | |id=chr12:54446974..54447007,+ | ||
|ontology_enrichment_celltype=CL:0000945;1.44e-54;24!CL:0000542;1.08e-35;53!CL:0000236;2.12e-32;13!CL:0000625;9.44e-13;11!CL:0002087;3.61e-11;104!CL:0000623;2.54e-10;3!CL:0000791;9.17e-10;18!CL:0000789;9.17e-10;18!CL:0002419;9.17e-10;18!CL:0000084;2.38e-08;25 | |ontology_enrichment_celltype=CL:0000542!3.49e-28!53;CL:0000051!3.49e-28!53;CL:0000838!3.42e-27!52;CL:0000945!1.86e-19!24;CL:0000826!1.86e-19!24;CL:0000236!2.33e-13!14;CL:0002087!9.61e-13!119;CL:0000625!2.68e-11!11;CL:0000738!5.65e-11!140;CL:0002031!6.26e-10!124;CL:0000791!4.75e-08!18;CL:0000789!4.75e-08!18;CL:0002420!4.75e-08!18;CL:0002419!4.75e-08!18;CL:0000790!4.75e-08!18;CL:0000084!1.13e-07!25;CL:0000827!1.13e-07!25 | ||
| | |ontology_enrichment_celltype_v019=CL:0000945;1.44e-54;24!CL:0000542;1.08e-35;53!CL:0000236;2.12e-32;13!CL:0000625;9.44e-13;11!CL:0002087;3.61e-11;104!CL:0000623;2.54e-10;3!CL:0000791;9.17e-10;18!CL:0000789;9.17e-10;18!CL:0002419;9.17e-10;18!CL:0000084;2.38e-08;25 | ||
|ontology_enrichment_disease=DOID:0060058;3.10e-08;10 | |ontology_enrichment_celltype_v019_2=CL:0000542,6.90e-62,53;CL:0000051,6.90e-62,53;CL:0000838,3.12e-59,52;CL:0000945,3.32e-55,24;CL:0000826,3.32e-55,24;CL:0000236,6.50e-36,14;CL:0002087,8.00e-32,115;CL:0000738,6.88e-27,136;CL:0002031,8.58e-25,120;CL:0000037,7.82e-20,168;CL:0002032,1.55e-18,161;CL:0000837,1.55e-18,161;CL:0000988,2.59e-18,177;CL:0000625,8.38e-13,11;CL:0000623,2.03e-10,3;CL:0000825,2.03e-10,3;CL:0000791,8.57e-10,18;CL:0000789,8.57e-10,18;CL:0002420,8.57e-10,18;CL:0002419,8.57e-10,18;CL:0000790,8.57e-10,18;CL:0000084,2.09e-08,25;CL:0000827,2.09e-08,25;CL:0000785,1.41e-07,2;CL:0000955,1.41e-07,2;CL:0000818,1.41e-07,2;CL:0000954,1.41e-07,2;CL:0000816,1.41e-07,2 | ||
|ontology_enrichment_uberon=UBERON:0000178;1.72e-11;15!UBERON:0000179;1.72e-11;15!UBERON:0000463;1.72e-11;15!UBERON:0002390;5.77e-09;32 | |ontology_enrichment_development_v019=CL:0000051;1.08e-35;53!CL:0000790;9.17e-10;18!CL:0000954;1.43e-07;2 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.10e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.36e-08,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.72e-11;15!UBERON:0000179;1.72e-11;15!UBERON:0000463;1.72e-11;15!UBERON:0002390;5.77e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.39e-11,15;UBERON:0000179,1.39e-11,15;UBERON:0000463,1.39e-11,15 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.982935746006035,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,9.78091593573776,11.9045854702421,12.4363034475613,0.786728553697808,1.15148819429164,0,0,0,0,6.35231044758473,2.27470771979874,0,1.10799081706375,0.802177789880567,0.217010870715852,0,1.29557466407592,0.257575567634187,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,2.73069305631066,5.33705552318133,1.28019066769952,1.60158394814405,5.74752439954483,5.2883589822789,1.90810750907073,2.27685187643779,1.76171156811282,1.91136614062614,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0.68725489096526,0.253019692019503,0.637130828648193,0.651083453856419,2.85135613334512,0.752875595388864,1.66382594500744,4.99722906209383,0.947109008176067,1.64225599384209,1.20964045934839,2.94184215361858,1.01377082717959,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0.323745888736263,0.140450806702248,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909658919938,0.871901815541886,0,0.492663237895943,0.176096868026452,0,0,0,0.317489471460845,1.52795370223311,1.17217447210047,0,0.308482478109971,0.300343057843917,2.00078502841405,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0,0,0.899756920638513,0,0,0,0,0,0,0,0,0,6.27676806363753,1.57624608161542,4.74380664690938,5.39040752374943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,0.215714200818617,1.60091336705167,0.303127571446259,0,1.20956117331872,0.248107807818777,0.306923946576125,0.280660094433074,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0.451199612907412,0.847168708148562,0.784349769176855,1.46139224653261,0.633309773357254,0,0,0.215915916102139,1.54227252690289,0.541892875087706,0,0,0,1.11937377361089,0,0,0,0,0,0,0.457847324091717,0.082509499920588,0.574265537996172,1.30012049207304,0,0,0.924291702687866,0.460511024178389,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,1.52927441428475,1.70894156152249,1.19115887728894,0,2.59389324477087,0.540031437238115,2.37937552888281,0.106824071127473,0,0,3.90186667764009,0,0,0.956557636372934,0,0,0,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0.102268682502155,3.93871377475422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0.234264445725339,4.56136973039165,0,0,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0.313932918407225,0,1.99226682220855,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0.0882561266915003,0,0,1.39100228192093,0,0.195551382734803,0,0.213452994739353,0.39961921916426,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0.203996435272644,0,0,0.136905378891993,0,0.859530882839914,1.57732412567589,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.906496732161005,0,0,0,0,0,0,0,0,0,0.496166021811951,1.97611631897944,6.94217810771107,0,0.544017803369474,0,0,0,0,0,0,0,0.573409195690071,0.332787154610557,0.683060432355218,0,0,0.454947352624943,0,0,0.468334905806882,0,0,0.467426619694449,0,0.189403005275089,0.251567901752575,0,0,0,0.15543720058278,0,0.318593534327405,0.449803112163605,0.155262956876259,0.414706207840855,0.265841714557995,0,0.450772826991655,0,0.406870733204662,0.181848659202559,0.537052785212442,0.464033759878494,0.398095888698616,0,0,0.336749488765919,0,0.385239660814607,0.428883182749851,1.04397716786085,0,0.694567422971502,0,0.179088841081487,1.23520578864389,0.657852148736121,0.530067437837643,0,0,0,0,0,0.414775308455192,0,0,0.163565394255844,0,0,0,0.39997479170986,0,0,0,0,0,0,2.17420431216208,0,0,0.54604819096007,0,0,0,0,0,1.41951141002256,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0.577628330751691,0,0,0,0.150420656698515,0.20170506870352,0,0,0,1.18284868973636,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,2.65038171378292,0,0.475788130837822,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0.430227358820278,0.118332000730565,0.255640214277473,0,0.2291068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| ||
|short_description=p@chr12:54446974..54447007,+ | |short_description=p@chr12:54446974..54447007,+ | ||
}} | }} |
Latest revision as of 09:58, 24 July 2015
Short description: | p@chr12:54446974..54447007, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:54446974..54447007, + |
Coexpression cluster: | C782_B_Burkitt_lymphoma_splenic_acute_CD19_xeroderma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.90e-62 | 53 |
common lymphoid progenitor | 6.90e-62 | 53 |
lymphoid lineage restricted progenitor cell | 3.12e-59 | 52 |
lymphocyte of B lineage | 3.32e-55 | 24 |
pro-B cell | 3.32e-55 | 24 |
B cell | 6.50e-36 | 14 |
nongranular leukocyte | 8.00e-32 | 115 |
leukocyte | 6.88e-27 | 136 |
hematopoietic lineage restricted progenitor cell | 8.58e-25 | 120 |
hematopoietic stem cell | 7.82e-20 | 168 |
hematopoietic oligopotent progenitor cell | 1.55e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.55e-18 | 161 |
hematopoietic cell | 2.59e-18 | 177 |
CD8-positive, alpha-beta T cell | 8.38e-13 | 11 |
natural killer cell | 2.03e-10 | 3 |
pro-NK cell | 2.03e-10 | 3 |
mature alpha-beta T cell | 8.57e-10 | 18 |
alpha-beta T cell | 8.57e-10 | 18 |
immature T cell | 8.57e-10 | 18 |
mature T cell | 8.57e-10 | 18 |
immature alpha-beta T cell | 8.57e-10 | 18 |
T cell | 2.09e-08 | 25 |
pro-T cell | 2.09e-08 | 25 |
mature B cell | 1.41e-07 | 2 |
pre-B-II cell | 1.41e-07 | 2 |
transitional stage B cell | 1.41e-07 | 2 |
small pre-B-II cell | 1.41e-07 | 2 |
immature B cell | 1.41e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.39e-11 | 15 |
haemolymphatic fluid | 1.39e-11 | 15 |
organism substance | 1.39e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.36e-08 | 10 |