FFCP PHASE1:Hg19::chr1:201332458..201332503,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:201332458..201332503,+ | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_at_chr1:201332458..201332503,+ | |description=CAGE_peak_at_chr1:201332458..201332503,+ | ||
|id=chr1:201332458..201332503,+ | |id=chr1:201332458..201332503,+ | ||
|ontology_enrichment_celltype=CL:0000188;9.48e-26;9 | |ontology_enrichment_celltype=CL:0000188!5.86e-17!9;CL:0000515!1.79e-07!4 | ||
| | |ontology_enrichment_celltype_v019=CL:0000188;9.48e-26;9 | ||
|ontology_enrichment_disease=DOID:114;9.37e-21;2!DOID:178;3.40e-11;1!DOID:326;3.40e-11;1!DOID:3978;3.40e-11;1!DOID:3394;3.40e-11;1!DOID:5844;3.40e-11;1!DOID:1287;7.47e-11;4 | |ontology_enrichment_celltype_v019_2=CL:0000188,1.03e-25,9 | ||
|ontology_enrichment_uberon=UBERON:0007100;3.36e-30;25!UBERON:0004151;1.00e-29;3!UBERON:0003978;2.29e-29;3!UBERON:0000946;2.29e-29;3!UBERON:0001134;1.17e-20;16!UBERON:0002036;1.17e-20;16!UBERON:0002081;2.74e-20;2!UBERON:0002133;5.14e-20;2!UBERON:0000948;1.77e-15;22!UBERON:0002079;2.79e-11;1!UBERON:0002084;3.08e-11;1!UBERON:0002082;3.08e-11;1!UBERON:0002146;3.76e-11;1!UBERON:0005623;3.76e-11;1!UBERON:0002135;5.30e-11;1!UBERON:0002134;9.05e-11;1!UBERON:0005208;9.05e-11;1!UBERON:0004145;9.05e-11;1!UBERON:0005946;9.05e-11;1!UBERON:0005965;9.05e-11;1!UBERON:0002078;9.05e-11;1!UBERON:0002385;3.26e-10;31!UBERON:0001015;3.26e-10;31!UBERON:0000383;3.26e-10;31!UBERON:0010313;3.18e-09;10!UBERON:0003103;4.91e-08;61 | |ontology_enrichment_development_v019=UBERON:0005062;3.35e-22;4!UBERON:0007284;3.35e-22;4!UBERON:0010227;2.79e-11;1!UBERON:0010226;3.08e-11;1!UBERON:0004140;4.36e-11;1!UBERON:0000358;6.44e-11;1!UBERON:0003104;4.55e-07;31 | ||
|ontology_enrichment_disease=DOID:114!4.05e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;9.37e-21;2!DOID:178;3.40e-11;1!DOID:326;3.40e-11;1!DOID:3978;3.40e-11;1!DOID:3394;3.40e-11;1!DOID:5844;3.40e-11;1!DOID:1287;7.47e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.37e-21,2;DOID:178,3.41e-11,1;DOID:326,3.41e-11,1;DOID:3978,3.41e-11,1;DOID:3394,3.41e-11,1;DOID:5844,3.41e-11,1;DOID:1287,7.47e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0004151!3.55e-11!3;UBERON:0003978!4.78e-11!3;UBERON:0009751!4.78e-11!3;UBERON:0000946!4.78e-11!3;UBERON:0002523!4.78e-11!3;UBERON:0005983!4.78e-11!3;UBERON:0002165!4.78e-11!3;UBERON:0002062!4.78e-11!3;UBERON:0007280!4.78e-11!3;UBERON:0007100!1.26e-10!27;UBERON:0003103!1.33e-10!69;UBERON:0002081!5.85e-08!2;UBERON:0002133!7.38e-08!2;UBERON:0003127!6.39e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.36e-30;25!UBERON:0004151;1.00e-29;3!UBERON:0003978;2.29e-29;3!UBERON:0000946;2.29e-29;3!UBERON:0001134;1.17e-20;16!UBERON:0002036;1.17e-20;16!UBERON:0002081;2.74e-20;2!UBERON:0002133;5.14e-20;2!UBERON:0000948;1.77e-15;22!UBERON:0002079;2.79e-11;1!UBERON:0002084;3.08e-11;1!UBERON:0002082;3.08e-11;1!UBERON:0002146;3.76e-11;1!UBERON:0005623;3.76e-11;1!UBERON:0002135;5.30e-11;1!UBERON:0002134;9.05e-11;1!UBERON:0005208;9.05e-11;1!UBERON:0004145;9.05e-11;1!UBERON:0005946;9.05e-11;1!UBERON:0005965;9.05e-11;1!UBERON:0002078;9.05e-11;1!UBERON:0002385;3.26e-10;31!UBERON:0001015;3.26e-10;31!UBERON:0000383;3.26e-10;31!UBERON:0010313;3.18e-09;10!UBERON:0003103;4.91e-08;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.00e-29,3;UBERON:0003978,2.40e-29,3;UBERON:0009751,2.40e-29,3;UBERON:0000946,2.40e-29,3;UBERON:0002523,2.40e-29,3;UBERON:0005983,2.40e-29,3;UBERON:0002165,2.40e-29,3;UBERON:0002062,2.40e-29,3;UBERON:0007280,2.40e-29,3;UBERON:0007100,7.16e-28,27;UBERON:0002081,2.74e-20,2;UBERON:0010227,2.74e-20,2;UBERON:0002133,5.40e-20,2;UBERON:0000948,3.73e-14,24;UBERON:0005498,3.73e-14,24;UBERON:0004140,3.73e-14,24;UBERON:0009881,3.73e-14,24;UBERON:0004141,3.73e-14,24;UBERON:0003084,3.73e-14,24;UBERON:0007005,3.73e-14,24;UBERON:0004139,3.73e-14,24;UBERON:0004291,3.73e-14,24;UBERON:0004797,6.09e-13,7;UBERON:0003103,9.88e-13,68;UBERON:0002079,2.79e-11,1;UBERON:0002084,3.08e-11,1;UBERON:0002082,3.08e-11,1;UBERON:0010226,3.08e-11,1;UBERON:0002146,3.76e-11,1;UBERON:0005623,3.76e-11,1;UBERON:0002135,5.57e-11,1;UBERON:0002134,9.05e-11,1;UBERON:0005208,9.05e-11,1;UBERON:0005946,9.05e-11,1;UBERON:0005965,9.05e-11,1;UBERON:0002078,9.05e-11,1;UBERON:0010313,3.22e-09,10;UBERON:0002342,3.22e-09,10;UBERON:0005062,3.22e-09,10 | |||
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| ||
|short_description=p@chr1:201332458..201332503,+ | |short_description=p@chr1:201332458..201332503,+ | ||
}} | }} |
Latest revision as of 02:06, 28 July 2015
Short description: | p@chr1:201332458..201332503, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:201332458..201332503, + |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.03e-25 | 9 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.37e-21 | 2 |
vascular disease | 3.41e-11 | 1 |
ischemia | 3.41e-11 | 1 |
extrinsic cardiomyopathy | 3.41e-11 | 1 |
myocardial ischemia | 3.41e-11 | 1 |
myocardial infarction | 3.41e-11 | 1 |
cardiovascular system disease | 7.47e-11 | 4 |