FFCP PHASE1:Hg19::chr12:93966545..93966557,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8835 | |EntrezGene=8835 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19382 | |HGNC=19382 | ||
|TSSclassifier=strong | |||
|UniProt=O14508 | |UniProt=O14508 | ||
|association_with_transcript=-78bp_to_AB004903_5end | |association_with_transcript=-78bp_to_AB004903_5end | ||
|cluster_id=chr12:93966545..93966557,+ | |||
|coexpression_cluster_id=C725 | |coexpression_cluster_id=C725 | ||
|description=CAGE_peak_25_at_SOCS2_5end | |description=CAGE_peak_25_at_SOCS2_5end | ||
|id=chr12:93966545..93966557,+ | |id=chr12:93966545..93966557,+ | ||
|ontology_enrichment_celltype=CL:0000097;5.35e-08;5 | |ontology_enrichment_celltype=CL:0000080!3.83e-07!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0000097;5.35e-08;5 | ||
|ontology_enrichment_disease=DOID:0060060;7.06e-34;1!DOID:0060061;7.06e-34;1!DOID:8691;7.06e-34;1 | |ontology_enrichment_celltype_v019_2=CL:0000097,5.35e-08,5;CL:0002028,5.35e-08,5 | ||
|ontology_enrichment_uberon=UBERON:0007195;9.85e-34;1!UBERON:0002331;2.27e-30;10!UBERON:0000178;1.47e-20;15!UBERON:0000179;1.47e-20;15!UBERON:0000463;1.47e-20;15!UBERON:0002390;2.19e-17;32!UBERON:0000478;3.63e-13;24!UBERON:0002193;3.56e-09;42!UBERON:0000922;9.91e-07;49 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;7.06e-34;1!DOID:0060061;7.06e-34;1!DOID:8691;7.06e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,7.06e-34,1;DOID:0060061,7.06e-34,1;DOID:8691,7.06e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0002771!1.18e-12!3;UBERON:0000200!1.15e-10!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;9.85e-34;1!UBERON:0002331;2.27e-30;10!UBERON:0000178;1.47e-20;15!UBERON:0000179;1.47e-20;15!UBERON:0000463;1.47e-20;15!UBERON:0002390;2.19e-17;32!UBERON:0000478;3.63e-13;24!UBERON:0002193;3.56e-09;42!UBERON:0000922;9.91e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,9.85e-34,1;UBERON:0002331,2.27e-30,10;UBERON:0000358,2.27e-30,10;UBERON:0000307,2.27e-30,10;UBERON:0000091,2.27e-30,10;UBERON:0000087,2.27e-30,10;UBERON:0007010,2.27e-30,10;UBERON:0007806,2.27e-30,10;UBERON:0008780,2.27e-30,10;UBERON:0005728,2.27e-30,10;UBERON:0000178,1.47e-20,15;UBERON:0000179,1.47e-20,15;UBERON:0000463,1.47e-20,15;UBERON:0000478,3.63e-13,24;UBERON:0002390,8.48e-09,98;UBERON:0003061,8.48e-09,98;UBERON:0002193,5.03e-08,108 | |||
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| ||
|short_description=p25@SOCS2 | |short_description=p25@SOCS2 | ||
}} | }} |
Latest revision as of 00:23, 16 September 2015
Short description: | p25@SOCS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_SOCS2_5end |
Coexpression cluster: | C725_Mast_cord_mycosis_mesenchymal_Endothelial_hepatic_Mesenchymal |
Association with transcript: | -78bp_to_AB004903_5end |
EntrezGene: | SOCS2 |
HGNC: | 19382 |
UniProt: | O14508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.35e-08 | 5 |
basophil mast progenitor cell | 5.35e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 9.85e-34 | 1 |
umbilical cord | 2.27e-30 | 10 |
blastocyst | 2.27e-30 | 10 |
blastula | 2.27e-30 | 10 |
bilaminar disc | 2.27e-30 | 10 |
inner cell mass | 2.27e-30 | 10 |
cleaving embryo | 2.27e-30 | 10 |
connecting stalk | 2.27e-30 | 10 |
inner cell mass derived epiblast | 2.27e-30 | 10 |
extraembryonic mesoderm | 2.27e-30 | 10 |
blood | 1.47e-20 | 15 |
haemolymphatic fluid | 1.47e-20 | 15 |
organism substance | 1.47e-20 | 15 |
extraembryonic structure | 3.63e-13 | 24 |
hematopoietic system | 8.48e-09 | 98 |
blood island | 8.48e-09 | 98 |
hemolymphoid system | 5.03e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 7.06e-34 | 1 |
cutaneous T cell lymphoma | 7.06e-34 | 1 |
mycosis fungoides | 7.06e-34 | 1 |