FFCP PHASE1:Hg19::chr11:34074870..34074876,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:34074870..34074876,- | |||
|description=CAGE_peak_at_chr11:34074870..34074876,- | |description=CAGE_peak_at_chr11:34074870..34074876,- | ||
|id=chr11:34074870..34074876,- | |id=chr11:34074870..34074876,- | ||
|ontology_enrichment_celltype=CL:0000346;9.43e-11;3!CL:1000428;9.43e-11;3!CL:0002577;9.43e-11;3!CL:0002592;9.43e-11;3!CL:0000306;2.18e-08;4!CL:0002222;2.18e-08;4!CL:0002224;2.18e-08;4!CL:0000333;5.86e-07;5!CL:0002559;5.86e-07;5!CL:0002552;5.86e-07;5 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000346;9.43e-11;3!CL:1000428;9.43e-11;3!CL:0002577;9.43e-11;3!CL:0002592;9.43e-11;3!CL:0000306;2.18e-08;4!CL:0002222;2.18e-08;4!CL:0002224;2.18e-08;4!CL:0000333;5.86e-07;5!CL:0002559;5.86e-07;5!CL:0002552;5.86e-07;5 | ||
|ontology_enrichment_disease=DOID:171;2.18e-12;10 | |ontology_enrichment_celltype_v019_2=CL:0002577,7.42e-11,3;CL:0002592,8.17e-11,3;CL:0000346,1.09e-10,3;CL:1000428,1.09e-10,3;CL:0000306,2.26e-08,4;CL:0002222,2.26e-08,4;CL:0002224,2.26e-08,4;CL:0002559,6.39e-07,5;CL:0002552,6.77e-07,5 | ||
|ontology_enrichment_uberon=UBERON:0003498;9.43e-11;3!UBERON:0005985;9.43e-11;3!UBERON:0000412;9.43e-11;3!UBERON:0001621;9.43e-11;3!UBERON:0001992;9.43e-11;3!UBERON:0002346;1.70e-08;4!UBERON:0000923;1.70e-08;4!UBERON:0010316;1.70e-08;4!UBERON:0005291;1.70e-08;4!UBERON:0001987;2.18e-08;4!UBERON:0010077;2.18e-08;4!UBERON:0005389;2.18e-08;4!UBERON:0000484;2.18e-08;4!UBERON:0000965;2.18e-08;4!UBERON:0001803;2.18e-08;4!UBERON:0002050;4.79e-07;5!UBERON:0005423;4.79e-07;5!UBERON:0002073;5.86e-07;5!UBERON:0000013;5.86e-07;5!UBERON:0002410;5.86e-07;5 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:171!5.69e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.18e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.12e-12,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;9.43e-11;3!UBERON:0005985;9.43e-11;3!UBERON:0000412;9.43e-11;3!UBERON:0001621;9.43e-11;3!UBERON:0001992;9.43e-11;3!UBERON:0002346;1.70e-08;4!UBERON:0000923;1.70e-08;4!UBERON:0010316;1.70e-08;4!UBERON:0005291;1.70e-08;4!UBERON:0001987;2.18e-08;4!UBERON:0010077;2.18e-08;4!UBERON:0005389;2.18e-08;4!UBERON:0000484;2.18e-08;4!UBERON:0000965;2.18e-08;4!UBERON:0001803;2.18e-08;4!UBERON:0002050;4.79e-07;5!UBERON:0005423;4.79e-07;5!UBERON:0002073;5.86e-07;5!UBERON:0000013;5.86e-07;5!UBERON:0002410;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,8.17e-11,3;UBERON:0000412,1.09e-10,3;UBERON:0001992,1.09e-10,3;UBERON:0001987,1.82e-08,4;UBERON:0004340,1.82e-08,4;UBERON:0010077,2.26e-08,4;UBERON:0005389,2.26e-08,4;UBERON:0000484,2.26e-08,4;UBERON:0002546,2.26e-08,4;UBERON:0000965,2.26e-08,4;UBERON:0001803,2.26e-08,4;UBERON:0003073,2.26e-08,4;UBERON:0005426,2.26e-08,4;UBERON:0003498,5.38e-07,5;UBERON:0005985,5.38e-07,5;UBERON:0000013,5.70e-07,5;UBERON:0002410,5.70e-07,5;UBERON:0002073,6.39e-07,5;UBERON:0005086,6.39e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0,0,0,0,0,0.975865597581014,0.123121058076788,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.590129310341499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0.74291500265913,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0.487894824518382,0,0.116193942869518,0.310983165046111,0,0,0,0,1.38134921352481,0,0,0,0,0.241011029883482,0.441175890929576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0.112085143993527,0,0,0.256686072559497,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.213425530045242,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0.61214552326098,0,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0,0,0,0,0,0,0.275078873194468,0,0,0,0,0,0,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0.243585196761792,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,1.57265941855896,0.218419276384028,0.33946505990805,0.212574920101683,2.97445834221605,0.558644917973244,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0,0,0,0,0,0.975865597581014,0.123121058076788,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.590129310341499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0.74291500265913,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0.487894824518382,0,0.116193942869518,0.310983165046111,0,0,0,0,1.38134921352481,0,0,0,0,0.241011029883482,0.441175890929576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0.112085143993527,0,0,0.256686072559497,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.213425530045242,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0.61214552326098,0,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0,0,0,0,0,0,0.275078873194468,0,0,0,0,0,0,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0.243585196761792,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,1.57265941855896,0.218419276384028,0.33946505990805,0.212574920101683,2.97445834221605,0.558644917973244,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr11:34074870..34074876,- | |short_description=p@chr11:34074870..34074876,- | ||
}} | }} |
Latest revision as of 21:42, 23 July 2015
Short description: | p@chr11:34074870..34074876, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:34074870..34074876, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 7.42e-11 | 3 |
smooth muscle cell of the coronary artery | 8.17e-11 | 3 |
hair follicle dermal papilla cell | 1.09e-10 | 3 |
stem cell of epidermis | 1.09e-10 | 3 |
crystallin accumulating cell | 2.26e-08 | 4 |
vertebrate lens cell | 2.26e-08 | 4 |
lens epithelial cell | 2.26e-08 | 4 |
hair follicle cell | 6.39e-07 | 5 |
fibroblast of gingiva | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 8.17e-11 | 3 |
dermal papilla | 1.09e-10 | 3 |
papillary layer of dermis | 1.09e-10 | 3 |
placenta | 1.82e-08 | 4 |
allantois | 1.82e-08 | 4 |
cuboidal epithelium | 2.26e-08 | 4 |
transparent eye structure | 2.26e-08 | 4 |
simple cuboidal epithelium | 2.26e-08 | 4 |
cranial placode | 2.26e-08 | 4 |
lens of camera-type eye | 2.26e-08 | 4 |
epithelium of lens | 2.26e-08 | 4 |
lens placode | 2.26e-08 | 4 |
lens vesicle | 2.26e-08 | 4 |
heart blood vessel | 5.38e-07 | 5 |
coronary vessel | 5.38e-07 | 5 |
sympathetic nervous system | 5.70e-07 | 5 |
autonomic nervous system | 5.70e-07 | 5 |
hair follicle | 6.39e-07 | 5 |
hair follicle placode | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.12e-12 | 10 |