FFCP PHASE1:Hg19::chr1:111682058..111682130,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:111682058..111682130,+
|short_description=p2@CEPT1
|description=CAGE_peak_2_at_CEPT1_5end
|association_with_transcript=-118bp_to_ENST00000498239,ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10390 | |EntrezGene=10390 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24289 | |HGNC=24289 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6K0 | |UniProt=Q9Y6K0 | ||
|association_with_transcript=-118bp_to_ENST00000498239,ENST00000545121,NM_001007794,uc001eag.2,uc001eah.1_5end | |||
|cluster_id=chr1:111682058..111682130,+ | |||
|description=CAGE_peak_2_at_CEPT1_5end | |||
|id=chr1:111682058..111682130,+ | |||
|ontology_enrichment_celltype=CL:0002087!7.91e-19!119;CL:0002031!1.22e-17!124;CL:0000037!1.32e-16!172;CL:0000566!1.32e-16!172;CL:0000738!1.40e-16!140;CL:0002032!2.79e-16!165;CL:0000837!2.79e-16!165;CL:0000988!8.16e-15!182;CL:0002009!1.05e-14!65;CL:0002194!2.60e-14!63;CL:0000576!2.60e-14!63;CL:0000040!2.60e-14!63;CL:0000559!2.60e-14!63;CL:0000839!3.40e-13!70;CL:0000557!5.89e-13!71;CL:0000763!2.36e-11!112;CL:0000049!2.36e-11!112;CL:0000766!2.89e-11!76;CL:0000860!6.10e-09!45;CL:0000945!3.06e-08!24;CL:0000826!3.06e-08!24;CL:0002057!4.89e-08!42;CL:0000134!1.20e-07!358;CL:0002320!3.23e-07!365;CL:0000236!4.39e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.51e-08;24!CL:0000576;6.73e-08;48!CL:0000473;1.39e-07;39!CL:0000234;1.39e-07;39!CL:0000236;2.49e-07;13!CL:0000136;6.48e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.17e-18,115;CL:0002031,1.05e-17,120;CL:0000037,9.46e-17,168;CL:0002032,1.09e-16,161;CL:0000837,1.09e-16,161;CL:0000738,2.53e-16,136;CL:0000988,6.94e-16,177;CL:0002009,1.13e-14,61;CL:0002194,3.24e-14,59;CL:0000576,3.24e-14,59;CL:0000040,3.24e-14,59;CL:0000559,3.24e-14,59;CL:0000839,2.73e-13,66;CL:0000557,4.97e-13,67;CL:0000766,9.59e-12,72;CL:0000763,1.00e-11,108;CL:0000049,1.00e-11,108;CL:0000473,1.36e-11,48;CL:0000234,1.36e-11,48;CL:0000134,6.53e-09,354;CL:0000860,1.25e-08,42;CL:0002057,1.25e-08,42;CL:0000945,2.15e-08,24;CL:0000826,2.15e-08,24;CL:0002320,3.63e-08,361;CL:0000236,1.62e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;8.96e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.95e-15!102;UBERON:0003061!5.95e-15!102;UBERON:0002193!9.13e-15!112;UBERON:0002405!9.54e-13!115;UBERON:0002371!1.63e-10!80;UBERON:0001474!9.33e-10!86;UBERON:0004765!3.68e-08!101;UBERON:0001434!3.68e-08!101;UBERON:0007023!7.82e-07!115;UBERON:0002384!9.01e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.88e-16,98;UBERON:0003061,4.88e-16,98;UBERON:0002193,3.29e-15,108;UBERON:0002405,4.85e-12,93;UBERON:0002371,3.41e-11,76;UBERON:0001474,5.62e-10,82;UBERON:0004765,5.02e-09,90;UBERON:0002384,1.18e-07,371;UBERON:0001434,3.40e-07,100 | |||
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| ||
|short_description=p2@CEPT1 | |||
}} | }} |
Latest revision as of 02:29, 16 September 2015
Short description: | p2@CEPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CEPT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -118bp_to_ENST00000498239, ENST00000545121, NM_001007794, uc001eag.2, uc001eah.1_5end |
EntrezGene: | CEPT1 |
HGNC: | 24289 |
UniProt: | Q9Y6K0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 2.17e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 1.05e-17 | 120 |
hematopoietic stem cell | 9.46e-17 | 168 |
hematopoietic oligopotent progenitor cell | 1.09e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-16 | 161 |
leukocyte | 2.53e-16 | 136 |
hematopoietic cell | 6.94e-16 | 177 |
macrophage dendritic cell progenitor | 1.13e-14 | 61 |
monopoietic cell | 3.24e-14 | 59 |
monocyte | 3.24e-14 | 59 |
monoblast | 3.24e-14 | 59 |
promonocyte | 3.24e-14 | 59 |
myeloid lineage restricted progenitor cell | 2.73e-13 | 66 |
granulocyte monocyte progenitor cell | 4.97e-13 | 67 |
myeloid leukocyte | 9.59e-12 | 72 |
myeloid cell | 1.00e-11 | 108 |
common myeloid progenitor | 1.00e-11 | 108 |
defensive cell | 1.36e-11 | 48 |
phagocyte | 1.36e-11 | 48 |
mesenchymal cell | 6.53e-09 | 354 |
classical monocyte | 1.25e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-08 | 42 |
lymphocyte of B lineage | 2.15e-08 | 24 |
pro-B cell | 2.15e-08 | 24 |
connective tissue cell | 3.63e-08 | 361 |
B cell | 1.62e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.88e-16 | 98 |
blood island | 4.88e-16 | 98 |
hemolymphoid system | 3.29e-15 | 108 |
immune system | 4.85e-12 | 93 |
bone marrow | 3.41e-11 | 76 |
bone element | 5.62e-10 | 82 |
skeletal element | 5.02e-09 | 90 |
connective tissue | 1.18e-07 | 371 |
skeletal system | 3.40e-07 | 100 |