FFCP PHASE1:Hg19::chr10:105881851..105881897,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=119392 | |EntrezGene=119392 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29574 | |HGNC=29574 | ||
|TSSclassifier=strong | |||
|UniProt=Q86XK3 | |UniProt=Q86XK3 | ||
|association_with_transcript=-25bp_to_ENST00000369727_5end | |association_with_transcript=-25bp_to_ENST00000369727_5end | ||
|cluster_id=chr10:105881851..105881897,+ | |||
|description=CAGE_peak_2_at_SFR1_5end | |description=CAGE_peak_2_at_SFR1_5end | ||
|id=chr10:105881851..105881897,+ | |id=chr10:105881851..105881897,+ | ||
|ontology_enrichment_celltype=CL:0000860;3.57e-18;33!CL:0002057;3.57e-18;33!CL:0000576;5.31e-18;48!CL:0000473;1.86e-17;39!CL:0000234;1.86e-17;39!CL:0000766;1.10e-14;69!CL:0002087;1.70e-08;104!CL:0000763;3.56e-08;100!CL:0000738;8.60e-08;136 | |ontology_enrichment_celltype=CL:0000839!5.50e-27!70;CL:0002031!2.38e-26!124;CL:0000037!2.86e-26!172;CL:0000566!2.86e-26!172;CL:0002032!1.32e-25!165;CL:0000837!1.32e-25!165;CL:0000738!1.83e-25!140;CL:0000988!2.75e-24!182;CL:0002057!6.20e-24!42;CL:0002087!1.18e-23!119;CL:0000766!1.55e-23!76;CL:0000557!4.79e-23!71;CL:0002194!7.57e-23!63;CL:0000576!7.57e-23!63;CL:0000040!7.57e-23!63;CL:0000559!7.57e-23!63;CL:0000763!1.09e-22!112;CL:0000049!1.09e-22!112;CL:0002009!2.06e-21!65;CL:0000860!3.47e-20!45;CL:0002320!1.60e-12!365;CL:0000134!3.60e-12!358;CL:0000219!1.40e-11!390;CL:0000048!8.80e-09!430;CL:0000034!1.05e-08!444;CL:0000723!6.18e-08!436 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;3.57e-18;33!CL:0002057;3.57e-18;33!CL:0000576;5.31e-18;48!CL:0000473;1.86e-17;39!CL:0000234;1.86e-17;39!CL:0000766;1.10e-14;69!CL:0002087;1.70e-08;104!CL:0000763;3.56e-08;100!CL:0000738;8.60e-08;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000839,2.96e-31,66;CL:0002031,1.08e-28,120;CL:0000037,1.30e-28,168;CL:0000738,3.27e-28,136;CL:0000766,5.75e-28,72;CL:0002032,6.11e-28,161;CL:0000837,6.11e-28,161;CL:0000473,1.05e-27,48;CL:0000234,1.05e-27,48;CL:0002194,8.03e-27,59;CL:0000576,8.03e-27,59;CL:0000040,8.03e-27,59;CL:0000559,8.03e-27,59;CL:0000557,1.35e-26,67;CL:0000988,2.57e-26,177;CL:0002087,3.65e-26,115;CL:0000763,1.41e-25,108;CL:0000049,1.41e-25,108;CL:0000860,9.42e-25,42;CL:0002057,9.42e-25,42;CL:0002009,1.14e-24,61;CL:0002320,1.29e-13,361;CL:0000134,2.28e-13,354;CL:0000219,9.26e-13,386;CL:0000048,2.07e-09,427;CL:0000034,2.72e-09,441;CL:0000723,1.77e-08,433;CL:0002393,9.81e-07,9;CL:0002397,9.81e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.75e-18;42!CL:0000049;9.90e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.05e-22!102;UBERON:0003061!7.05e-22!102;UBERON:0002371!1.08e-21!80;UBERON:0002193!1.28e-19!112;UBERON:0004765!7.08e-19!101;UBERON:0001434!7.08e-19!101;UBERON:0001474!8.46e-19!86;UBERON:0002405!6.37e-12!115;UBERON:0002384!9.12e-12!375;UBERON:0002204!6.18e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.55e-25,76;UBERON:0002390,5.47e-25,98;UBERON:0003061,5.47e-25,98;UBERON:0002193,1.55e-22,108;UBERON:0002405,3.54e-22,93;UBERON:0001474,5.39e-22,82;UBERON:0004765,3.05e-21,90;UBERON:0001434,3.14e-21,100;UBERON:0002384,1.49e-12,371;UBERON:0003081,7.01e-09,203;UBERON:0002204,2.83e-08,167 | |||
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| ||
|short_description=p2@SFR1 | |short_description=p2@SFR1 | ||
}} | }} |
Latest revision as of 05:22, 16 September 2015
Short description: | p2@SFR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SFR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000369727_5end |
EntrezGene: | SFR1 |
HGNC: | 29574 |
UniProt: | Q86XK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 2.96e-31 | 66 |
hematopoietic lineage restricted progenitor cell | 1.08e-28 | 120 |
hematopoietic stem cell | 1.30e-28 | 168 |
leukocyte | 3.27e-28 | 136 |
myeloid leukocyte | 5.75e-28 | 72 |
hematopoietic oligopotent progenitor cell | 6.11e-28 | 161 |
hematopoietic multipotent progenitor cell | 6.11e-28 | 161 |
defensive cell | 1.05e-27 | 48 |
phagocyte | 1.05e-27 | 48 |
monopoietic cell | 8.03e-27 | 59 |
monocyte | 8.03e-27 | 59 |
monoblast | 8.03e-27 | 59 |
promonocyte | 8.03e-27 | 59 |
granulocyte monocyte progenitor cell | 1.35e-26 | 67 |
hematopoietic cell | 2.57e-26 | 177 |
nongranular leukocyte | 3.65e-26 | 115 |
myeloid cell | 1.41e-25 | 108 |
common myeloid progenitor | 1.41e-25 | 108 |
classical monocyte | 9.42e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.42e-25 | 42 |
macrophage dendritic cell progenitor | 1.14e-24 | 61 |
connective tissue cell | 1.29e-13 | 361 |
mesenchymal cell | 2.28e-13 | 354 |
motile cell | 9.26e-13 | 386 |
multi fate stem cell | 2.07e-09 | 427 |
stem cell | 2.72e-09 | 441 |
somatic stem cell | 1.77e-08 | 433 |
intermediate monocyte | 9.81e-07 | 9 |
CD14-positive, CD16-positive monocyte | 9.81e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.55e-25 | 76 |
hematopoietic system | 5.47e-25 | 98 |
blood island | 5.47e-25 | 98 |
hemolymphoid system | 1.55e-22 | 108 |
immune system | 3.54e-22 | 93 |
bone element | 5.39e-22 | 82 |
skeletal element | 3.05e-21 | 90 |
skeletal system | 3.14e-21 | 100 |
connective tissue | 1.49e-12 | 371 |
lateral plate mesoderm | 7.01e-09 | 203 |
musculoskeletal system | 2.83e-08 | 167 |