FFCP PHASE1:Hg19::chr10:116852602..116852626,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26033 | |EntrezGene=26033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29063 | |HGNC=29063 | ||
|TSSclassifier=strong | |||
|UniProt=F5H129,Q5VV63 | |UniProt=F5H129,Q5VV63 | ||
|association_with_transcript=-497bp_to_ENST00000485327,ENST00000529665,NM_207303,uc001lce.2,uc001lcf.2,uc001lcg.2,uc009xyq.2_5end | |association_with_transcript=-497bp_to_ENST00000485327,ENST00000529665,NM_207303,uc001lce.2,uc001lcf.2,uc001lcg.2,uc009xyq.2_5end | ||
|cluster_id=chr10:116852602..116852626,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_5_at_ATRNL1_5end | |description=CAGE_peak_5_at_ATRNL1_5end | ||
|id=chr10:116852602..116852626,+ | |id=chr10:116852602..116852626,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0002322!6.60e-07!5;CL:0000047!9.81e-07!8 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.80e-10;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
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|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.72e-52!86;UBERON:0001017!2.57e-50!82;UBERON:0000073!5.51e-50!94;UBERON:0001016!5.51e-50!94;UBERON:0001049!5.86e-50!57;UBERON:0005068!5.86e-50!57;UBERON:0006241!5.86e-50!57;UBERON:0007135!5.86e-50!57;UBERON:0001869!5.68e-49!32;UBERON:0001893!6.06e-49!34;UBERON:0002020!6.77e-49!34;UBERON:0003528!6.77e-49!34;UBERON:0002780!1.72e-48!41;UBERON:0001890!1.72e-48!41;UBERON:0006240!1.72e-48!41;UBERON:0003080!3.94e-47!42;UBERON:0002791!1.14e-46!33;UBERON:0002616!3.36e-45!59;UBERON:0002619!6.38e-44!22;UBERON:0000955!2.78e-41!69;UBERON:0006238!2.78e-41!69;UBERON:0001950!1.72e-39!20;UBERON:0000956!4.57e-38!25;UBERON:0000203!4.57e-38!25;UBERON:0007023!3.06e-37!115;UBERON:0003075!6.80e-37!86;UBERON:0007284!6.80e-37!86;UBERON:0002346!1.42e-36!90;UBERON:0003056!6.27e-34!61;UBERON:0000033!9.38e-25!123;UBERON:0000153!2.53e-24!129;UBERON:0007811!2.53e-24!129;UBERON:0000924!2.88e-24!173;UBERON:0006601!2.88e-24!173;UBERON:0004121!5.24e-24!169;UBERON:0000200!2.54e-15!6;UBERON:0000025!1.15e-14!194;UBERON:0001872!4.14e-13!5;UBERON:0002021!2.21e-12!5;UBERON:0002308!4.04e-12!9;UBERON:0000125!4.04e-12!9;UBERON:0001871!4.59e-11!7;UBERON:0004111!9.94e-11!241;UBERON:0002420!3.58e-09!9;UBERON:0007245!3.58e-09!9;UBERON:0010009!3.58e-09!9;UBERON:0010011!3.58e-09!9;UBERON:0000454!3.58e-09!9;UBERON:0009663!1.74e-08!7;UBERON:0002771!2.83e-08!3;UBERON:0000349!2.84e-08!5;UBERON:0000477!2.96e-08!286;UBERON:0000483!9.73e-08!309;UBERON:0000064!1.47e-07!219;UBERON:0000119!1.52e-07!312;UBERON:0000988!2.23e-07!3;UBERON:0000475!2.56e-07!365 | |||
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|short_description=p5@ATRNL1 | |short_description=p5@ATRNL1 | ||
}} | }} |
Latest revision as of 13:25, 16 September 2015
Short description: | p5@ATRNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ATRNL1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -497bp_to_ENST00000485327, ENST00000529665, NM_207303, uc001lce.2, uc001lcf.2, uc001lcg.2, uc009xyq.2_5end |
EntrezGene: | ATRNL1 |
HGNC: | 29063 |
UniProt: | F5H129Q5VV63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data