FFCP PHASE1:Hg19::chr1:110453427..110453449,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:110453427..110453449,+
|short_description=p2@CSF1
|description=CAGE_peak_2_at_CSF1_5end
|association_with_transcript=-42bp_to_ENST00000488198_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1435 | |EntrezGene=1435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2432 | |HGNC=2432 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJA2 | |UniProt=E9PJA2 | ||
|association_with_transcript=-42bp_to_ENST00000488198_5end | |||
|cluster_id=chr1:110453427..110453449,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_2_at_CSF1_5end | |||
|id=chr1:110453427..110453449,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.46e-18!180;CL:0000057!2.90e-11!75;CL:0000222!1.33e-09!119;CL:0000680!2.52e-09!57;CL:0000056!2.52e-09!57;CL:0000355!2.52e-09!57;CL:0000183!4.96e-09!59;CL:0000187!2.69e-08!54;CL:0000192!1.16e-07!42;CL:0000514!1.16e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.01e-12,76;CL:0000680,1.84e-10,58;CL:0000056,1.84e-10,58;CL:0000355,1.84e-10,58;CL:0000222,1.16e-09,121;CL:0000187,2.68e-09,55;CL:0000192,2.32e-08,43;CL:0000514,2.32e-08,43;CL:0000048,1.17e-07,427;CL:0000393,1.88e-07,61;CL:0000211,1.88e-07,61;CL:0000723,8.11e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!1.30e-08!70;UBERON:0005256!2.28e-08!143;UBERON:0001134!2.66e-08!61;UBERON:0002036!2.66e-08!61;UBERON:0003082!2.66e-08!61;UBERON:0000914!4.38e-08!83;UBERON:0002329!4.38e-08!83;UBERON:0003077!4.38e-08!83;UBERON:0003059!4.38e-08!83;UBERON:0007282!4.38e-08!83;UBERON:0009618!4.38e-08!83;UBERON:0007285!4.38e-08!83;UBERON:0002385!4.54e-08!63;UBERON:0001015!4.54e-08!63;UBERON:0000383!4.54e-08!63;UBERON:0000486!5.21e-07!82;UBERON:0000475!8.01e-07!365 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.86e-09,71;UBERON:0003059,1.86e-09,71;UBERON:0007282,1.86e-09,71;UBERON:0004290,1.86e-09,71;UBERON:0009618,1.86e-09,71;UBERON:0007503,2.02e-09,78;UBERON:0001134,4.40e-09,62;UBERON:0002036,4.40e-09,62;UBERON:0003082,4.40e-09,62;UBERON:0003077,4.60e-09,72;UBERON:0007285,4.60e-09,72;UBERON:0003104,4.97e-09,160;UBERON:0009142,4.97e-09,160;UBERON:0007524,1.10e-08,73;UBERON:0002385,1.23e-08,64;UBERON:0001015,1.23e-08,64;UBERON:0000383,1.23e-08,64;UBERON:0005256,1.74e-08,122;UBERON:0000486,1.92e-07,83 | |||
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| ||
|short_description=p2@CSF1 | |||
}} | }} |
Latest revision as of 23:12, 15 September 2015
Short description: | p2@CSF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CSF1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -42bp_to_ENST00000488198_5end |
EntrezGene: | CSF1 |
HGNC: | 2432 |
UniProt: | E9PJA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.01e-12 | 76 |
muscle precursor cell | 1.84e-10 | 58 |
myoblast | 1.84e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.84e-10 | 58 |
mesodermal cell | 1.16e-09 | 121 |
muscle cell | 2.68e-09 | 55 |
smooth muscle cell | 2.32e-08 | 43 |
smooth muscle myoblast | 2.32e-08 | 43 |
multi fate stem cell | 1.17e-07 | 427 |
electrically responsive cell | 1.88e-07 | 61 |
electrically active cell | 1.88e-07 | 61 |
somatic stem cell | 8.11e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
somite | 1.86e-09 | 71 |
presomitic mesoderm | 1.86e-09 | 71 |
presumptive segmental plate | 1.86e-09 | 71 |
dermomyotome | 1.86e-09 | 71 |
trunk paraxial mesoderm | 1.86e-09 | 71 |
epithelial vesicle | 2.02e-09 | 78 |
skeletal muscle tissue | 4.40e-09 | 62 |
striated muscle tissue | 4.40e-09 | 62 |
myotome | 4.40e-09 | 62 |
paraxial mesoderm | 4.60e-09 | 72 |
presumptive paraxial mesoderm | 4.60e-09 | 72 |
mesenchyme | 4.97e-09 | 160 |
entire embryonic mesenchyme | 4.97e-09 | 160 |
dense mesenchyme tissue | 1.10e-08 | 73 |
muscle tissue | 1.23e-08 | 64 |
musculature | 1.23e-08 | 64 |
musculature of body | 1.23e-08 | 64 |
trunk mesenchyme | 1.74e-08 | 122 |
multilaminar epithelium | 1.92e-07 | 83 |