FFCP PHASE1:Hg19::chr7:93518374..93518429,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:93518374..93518429,- | |||
|coexpression_cluster_id=C378 | |coexpression_cluster_id=C378 | ||
|description=CAGE_peak_at_chr7:93518374..93518429,- | |description=CAGE_peak_at_chr7:93518374..93518429,- | ||
|id=chr7:93518374..93518429,- | |id=chr7:93518374..93518429,- | ||
|ontology_enrichment_celltype=CL:0000359;2.97e-40;32!CL:0000192;7.23e-29;43!CL:0002539;1.46e-17;10!CL:0000187;1.49e-16;55!CL:0002494;4.21e-15;16!CL:0000393;1.47e-13;61!CL:0000211;1.47e-13;61!CL:0002595;2.77e-11;5!CL:0002594;6.11e-08;4!CL:0002592;6.55e-07;3 | |ontology_enrichment_celltype=CL:0000680!6.52e-25!57;CL:0000056!6.52e-25!57;CL:0000355!6.52e-25!57;CL:0000192!5.22e-24!42;CL:0000514!5.22e-24!42;CL:0000359!5.57e-24!32;CL:0000393!2.27e-23!60;CL:0000211!2.27e-23!60;CL:0000187!2.38e-23!54;CL:0000183!8.15e-22!59;CL:0000055!7.43e-21!180;CL:0000222!1.13e-20!119;CL:0000220!4.25e-11!246;CL:0002321!8.84e-11!248;CL:0002494!2.76e-10!16;CL:0002539!7.07e-10!10;CL:0000548!4.96e-08!679;CL:0000004!4.96e-08!679;CL:0000255!4.96e-08!679;CL:0002371!9.60e-08!591;CL:0000012!9.83e-08!682;CL:0000144!1.43e-07!625 | ||
| | |ontology_enrichment_celltype_v019=CL:0000359;2.97e-40;32!CL:0000192;7.23e-29;43!CL:0002539;1.46e-17;10!CL:0000187;1.49e-16;55!CL:0002494;4.21e-15;16!CL:0000393;1.47e-13;61!CL:0000211;1.47e-13;61!CL:0002595;2.77e-11;5!CL:0002594;6.11e-08;4!CL:0002592;6.55e-07;3 | ||
|ontology_enrichment_disease=DOID:2394;2.99e-24;14!DOID:120;2.43e-14;27!DOID:193;4.80e-13;29!DOID:0060072;6.05e-09;4!DOID:0060084;2.39e-07;3!DOID:127;2.39e-07;3 | |ontology_enrichment_celltype_v019_2=CL:0000359,9.47e-42,32;CL:0000192,9.83e-39,43;CL:0000514,9.83e-39,43;CL:0000187,4.27e-32,55;CL:0000680,9.67e-32,58;CL:0000056,9.67e-32,58;CL:0000355,9.67e-32,58;CL:0000393,7.21e-28,61;CL:0000211,7.21e-28,61;CL:0002539,1.21e-17,10;CL:0002494,5.15e-15,16;CL:0000222,3.86e-13,121;CL:0002595,2.59e-11,5;CL:0000723,1.77e-10,433;CL:0000048,2.06e-10,427;CL:0000034,6.49e-10,441;CL:0002594,4.65e-08,4;CL:0002592,6.64e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0004573;5.27e-25;33!UBERON:0004571;5.27e-25;33!UBERON:0001637;1.12e-22;42!UBERON:0003509;1.12e-22;42!UBERON:0004572;1.12e-22;42!UBERON:0004237;1.46e-17;10!UBERON:0004695;1.46e-17;10!UBERON:0002111;1.46e-17;10!UBERON:0004178;1.46e-17;10!UBERON:0001135;5.73e-16;15!UBERON:0000992;7.66e-14;13!UBERON:0007500;1.95e-12;56!UBERON:0001981;1.95e-12;56!UBERON:0004537;1.95e-12;56!UBERON:0000947;5.71e-12;21!UBERON:0010191;5.71e-12;21!UBERON:0003834;2.77e-11;5!UBERON:0001533;2.77e-11;5!UBERON:0003513;9.98e-11;7!UBERON:0002118;2.27e-10;5!UBERON:0000948;3.90e-10;22!UBERON:0000991;2.65e-09;21!UBERON:0002119;6.88e-09;4!UBERON:0003134;9.18e-09;33!UBERON:0000055;1.40e-08;65!UBERON:0007100;1.45e-08;25!UBERON:0001310;6.11e-08;4!UBERON:0000474;8.95e-08;37!UBERON:0003914;9.36e-08;74!UBERON:0003100;1.22e-07;41!UBERON:0002049;3.49e-07;75!UBERON:0007798;3.49e-07;75!UBERON:0002385;5.08e-07;31!UBERON:0001015;5.08e-07;31!UBERON:0000383;5.08e-07;31!UBERON:0003498;6.55e-07;3!UBERON:0005985;6.55e-07;3!UBERON:0001621;6.55e-07;3 | |ontology_enrichment_development_v019=CL:0000514;7.23e-29;43!CL:0000355;9.58e-16;58 | ||
|ontology_enrichment_disease=DOID:2394!1.89e-13!14;DOID:120!4.02e-09!27;DOID:193!4.91e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.99e-24;14!DOID:120;2.43e-14;27!DOID:193;4.80e-13;29!DOID:0060072;6.05e-09;4!DOID:0060084;2.39e-07;3!DOID:127;2.39e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.44e-24,14;DOID:120,1.60e-14,27;DOID:193,3.27e-13,29;DOID:0060072,5.19e-09,4;DOID:0060084,2.40e-07,3;DOID:127,2.40e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.56e-28!84;UBERON:0001981!2.16e-25!60;UBERON:0007500!2.16e-25!60;UBERON:0004537!2.16e-25!60;UBERON:0006965!2.16e-25!60;UBERON:0000055!6.57e-25!69;UBERON:0002049!2.82e-24!79;UBERON:0007798!2.82e-24!79;UBERON:0001637!3.31e-24!42;UBERON:0003509!3.31e-24!42;UBERON:0004572!3.31e-24!42;UBERON:0004290!1.45e-23!70;UBERON:0001134!3.13e-23!61;UBERON:0002036!3.13e-23!61;UBERON:0003082!3.13e-23!61;UBERON:0002385!6.74e-22!63;UBERON:0001015!6.74e-22!63;UBERON:0000383!6.74e-22!63;UBERON:0000486!1.03e-21!82;UBERON:0003914!1.17e-21!118;UBERON:0004535!1.70e-21!110;UBERON:0000914!2.00e-21!83;UBERON:0002329!2.00e-21!83;UBERON:0003077!2.00e-21!83;UBERON:0003059!2.00e-21!83;UBERON:0007282!2.00e-21!83;UBERON:0009618!2.00e-21!83;UBERON:0007285!2.00e-21!83;UBERON:0004573!4.62e-21!33;UBERON:0004571!4.62e-21!33;UBERON:0001009!2.89e-20!113;UBERON:0000490!5.38e-19!138;UBERON:0005256!3.96e-17!143;UBERON:0000483!3.12e-14!309;UBERON:0000119!4.42e-14!312;UBERON:0002100!7.84e-14!216;UBERON:0000947!1.05e-10!21;UBERON:0010191!1.05e-10!21;UBERON:0000948!1.45e-10!24;UBERON:0005498!1.45e-10!24;UBERON:0004140!1.45e-10!24;UBERON:0009881!1.45e-10!24;UBERON:0004141!1.45e-10!24;UBERON:0003084!1.45e-10!24;UBERON:0007005!1.45e-10!24;UBERON:0004139!1.45e-10!24;UBERON:0004291!1.45e-10!24;UBERON:0004237!7.07e-10!10;UBERON:0004695!7.07e-10!10;UBERON:0002111!7.07e-10!10;UBERON:0004178!7.07e-10!10;UBERON:0004111!7.57e-10!241;UBERON:0000025!1.49e-09!194;UBERON:0000477!1.53e-09!286;UBERON:0003104!1.96e-09!238;UBERON:0009142!1.96e-09!238;UBERON:0007100!1.21e-08!27;UBERON:0001135!2.37e-08!15;UBERON:0000926!2.72e-08!448;UBERON:0004120!2.72e-08!448;UBERON:0006603!2.72e-08!448;UBERON:0000992!2.86e-08!13;UBERON:0000481!1.27e-07!347;UBERON:0000467!5.35e-07!625;UBERON:0003513!6.57e-07!8;UBERON:0000480!6.60e-07!626 | |||
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| ||
|short_description=p@chr7:93518374..93518429,- | |short_description=p@chr7:93518374..93518429,- | ||
}} | }} |
Latest revision as of 12:36, 31 July 2015
Short description: | p@chr7:93518374..93518429, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93518374..93518429, - |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.47e-42 | 32 |
smooth muscle cell | 9.83e-39 | 43 |
smooth muscle myoblast | 9.83e-39 | 43 |
muscle cell | 4.27e-32 | 55 |
muscle precursor cell | 9.67e-32 | 58 |
myoblast | 9.67e-32 | 58 |
multi-potent skeletal muscle stem cell | 9.67e-32 | 58 |
electrically responsive cell | 7.21e-28 | 61 |
electrically active cell | 7.21e-28 | 61 |
aortic smooth muscle cell | 1.21e-17 | 10 |
cardiocyte | 5.15e-15 | 16 |
mesodermal cell | 3.86e-13 | 121 |
smooth muscle cell of the subclavian artery | 2.59e-11 | 5 |
somatic stem cell | 1.77e-10 | 433 |
multi fate stem cell | 2.06e-10 | 427 |
stem cell | 6.49e-10 | 441 |
smooth muscle cell of the umbilical artery | 4.65e-08 | 4 |
smooth muscle cell of the coronary artery | 6.64e-07 | 3 |
Ontology term | p-value | n |
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