FFCP PHASE1:Hg19::chr11:107582775..107582788,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6588 | |EntrezGene=6588 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11089 | |HGNC=11089 | ||
|TSSclassifier=strong | |||
|UniProt=O00631 | |UniProt=O00631 | ||
|association_with_transcript=0bp_to_ENST00000305991,NM_003063,uc001pjp.2_5end | |association_with_transcript=0bp_to_ENST00000305991,NM_003063,uc001pjp.2_5end | ||
|cluster_id=chr11:107582775..107582788,- | |||
|coexpression_cluster_id=C31 | |coexpression_cluster_id=C31 | ||
|description=CAGE_peak_1_at_SLN_5end | |description=CAGE_peak_1_at_SLN_5end | ||
|id=chr11:107582775..107582788,- | |id=chr11:107582775..107582788,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;8.80e-08;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000922;1.63e-10;49!UBERON:0005090;1.59e-09;2!UBERON:0001630;1.59e-09;2!UBERON:0000341;2.11e-09;2!UBERON:0003127;4.72e-09;2!UBERON:0002081;6.47e-09;2!UBERON:0001829;9.20e-09;2!UBERON:0002133;9.75e-09;2 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.01e-34!115;UBERON:0001049!9.62e-12!57;UBERON:0005068!9.62e-12!57;UBERON:0006241!9.62e-12!57;UBERON:0007135!9.62e-12!57;UBERON:0001893!3.89e-11!34;UBERON:0002020!4.16e-11!34;UBERON:0003528!4.16e-11!34;UBERON:0003103!6.57e-11!69;UBERON:0001869!9.25e-11!32;UBERON:0003075!1.30e-10!86;UBERON:0007284!1.30e-10!86;UBERON:0000153!1.42e-10!129;UBERON:0007811!1.42e-10!129;UBERON:0000481!1.51e-10!347;UBERON:0005743!2.63e-10!86;UBERON:0000955!2.84e-10!69;UBERON:0006238!2.84e-10!69;UBERON:0001017!3.43e-10!82;UBERON:0002791!3.80e-10!33;UBERON:0002616!5.82e-10!59;UBERON:0002346!8.50e-10!90;UBERON:0000956!1.09e-09!25;UBERON:0000203!1.09e-09!25;UBERON:0001950!2.15e-09!20;UBERON:0000073!1.25e-08!94;UBERON:0001016!1.25e-08!94;UBERON:0002780!1.57e-08!41;UBERON:0001890!1.57e-08!41;UBERON:0006240!1.57e-08!41;UBERON:0000033!2.03e-08!123;UBERON:0002619!2.47e-08!22;UBERON:0003080!3.13e-08!42;UBERON:0000062!2.04e-07!511;UBERON:0004111!2.07e-07!241;UBERON:0007100!4.52e-07!27;UBERON:0004121!6.19e-07!169;UBERON:0000477!6.62e-07!286;UBERON:0000468!9.35e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.63e-10;49!UBERON:0005090;1.59e-09;2!UBERON:0001630;1.59e-09;2!UBERON:0000341;2.11e-09;2!UBERON:0003127;4.72e-09;2!UBERON:0002081;6.47e-09;2!UBERON:0001829;9.20e-09;2!UBERON:0002133;9.75e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.74e-18,114;UBERON:0005090,1.59e-09,2;UBERON:0001630,1.59e-09,2;UBERON:0000341,2.11e-09,2;UBERON:0003103,2.57e-09,68;UBERON:0003127,4.72e-09,2;UBERON:0002081,7.00e-09,2;UBERON:0010227,7.00e-09,2;UBERON:0001829,8.85e-09,2;UBERON:0002133,1.07e-08,2 | |||
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| ||
|short_description=p1@SLN | |short_description=p1@SLN | ||
}} | }} |
Latest revision as of 22:46, 24 September 2015
Short description: | p1@SLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLN_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 0bp_to_ENST00000305991, NM_003063, uc001pjp.2_5end |
EntrezGene: | SLN |
HGNC: | 11089 |
UniProt: | O00631 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.74e-18 | 114 |
muscle structure | 1.59e-09 | 2 |
muscle organ | 1.59e-09 | 2 |
throat | 2.11e-09 | 2 |
compound organ | 2.57e-09 | 68 |
open tracheal system trachea | 4.72e-09 | 2 |
cardiac atrium | 7.00e-09 | 2 |
future cardiac atrium | 7.00e-09 | 2 |
major salivary gland | 8.85e-09 | 2 |
atrioventricular valve | 1.07e-08 | 2 |