FFCP PHASE1:Hg19::chr17:38545799..38545823,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7153 | |EntrezGene=7153 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11989 | |HGNC=11989 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_L47276,L47277_5end | |association_with_transcript=-26bp_to_L47276,L47277_5end | ||
|cluster_id=chr17:38545799..38545823,- | |||
|coexpression_cluster_id=C565 | |coexpression_cluster_id=C565 | ||
|description=CAGE_peak_4_at_TOP2A_5end | |description=CAGE_peak_4_at_TOP2A_5end | ||
|id=chr17:38545799..38545823,- | |id=chr17:38545799..38545823,- | ||
|ontology_enrichment_celltype=CL:0000236;1.04e-23;13!CL:0000542;6.59e-18;53!CL:0000791;5.39e-17;18!CL:0000789;5.39e-17;18!CL:0002419;5.39e-17;18!CL:0000625;4.93e-13;11!CL:0000945;1.17e-12;24!CL:0000784;1.68e-12;3!CL:0000898;2.18e-12;3!CL:0000084;4.06e-12;25!CL:0002032;3.25e-10;1!CL:0000557;3.25e-10;1!CL:0000222;8.61e-10;1!CL:0000895;8.61e-10;1 | |ontology_enrichment_celltype=CL:0000838!2.13e-15!52;CL:0000542!5.66e-15!53;CL:0000051!5.66e-15!53;CL:0000236!3.23e-13!14;CL:0000791!1.47e-11!18;CL:0000789!1.47e-11!18;CL:0002420!1.47e-11!18;CL:0002419!1.47e-11!18;CL:0000790!1.47e-11!18;CL:0000625!4.49e-11!11;CL:0000945!3.01e-09!24;CL:0000826!3.01e-09!24;CL:0000084!7.17e-09!25;CL:0000827!7.17e-09!25;CL:0000037!9.77e-09!172;CL:0000566!9.77e-09!172;CL:0000988!1.10e-07!182;CL:0002032!6.65e-07!165;CL:0000837!6.65e-07!165 | ||
| | |ontology_enrichment_celltype_v019=CL:0000236;1.04e-23;13!CL:0000542;6.59e-18;53!CL:0000791;5.39e-17;18!CL:0000789;5.39e-17;18!CL:0002419;5.39e-17;18!CL:0000625;4.93e-13;11!CL:0000945;1.17e-12;24!CL:0000784;1.68e-12;3!CL:0000898;2.18e-12;3!CL:0000084;4.06e-12;25!CL:0002032;3.25e-10;1!CL:0000557;3.25e-10;1!CL:0000222;8.61e-10;1!CL:0000895;8.61e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000838,4.05e-22,52;CL:0000236,5.35e-22,14;CL:0000542,1.15e-21,53;CL:0000051,1.15e-21,53;CL:0000791,4.89e-17,18;CL:0000789,4.89e-17,18;CL:0002420,4.89e-17,18;CL:0002419,4.89e-17,18;CL:0000790,4.89e-17,18;CL:0000625,4.78e-13,11;CL:0000945,1.16e-12,24;CL:0000826,1.16e-12,24;CL:0000898,1.89e-12,3;CL:0000784,2.12e-12,3;CL:0000084,3.79e-12,25;CL:0000827,3.79e-12,25;CL:0000738,1.05e-11,136;CL:0002087,1.70e-10,115;CL:0000037,1.89e-10,168;CL:0002031,5.70e-10,120;CL:0000810,6.33e-10,1;CL:0000895,6.33e-10,1;CL:0002436,6.33e-10,1;CL:0002427,6.33e-10,1;CL:0002428,6.33e-10,1;CL:0002429,6.33e-10,1;CL:0002433,6.33e-10,1;CL:0002431,6.33e-10,1;CL:0002432,6.33e-10,1;CL:0000988,8.82e-10,177;CL:0002032,3.70e-08,161;CL:0000837,3.70e-08,161 | ||
|ontology_enrichment_development_v019=CL:0000051;6.59e-18;53!CL:0000790;5.39e-17;18!CL:0002427;8.61e-10;1 | |||
|ontology_enrichment_disease=DOID:162!8.46e-09!235;DOID:14566!2.39e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@TOP2A | |short_description=p4@TOP2A | ||
}} | }} |
Latest revision as of 01:28, 20 September 2015
Short description: | p4@TOP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TOP2A_5end |
Coexpression cluster: | C565_CD34_CD133_acute_thymus_Hodgkin_Burkitt_testis |
Association with transcript: | -26bp_to_L47276, L47277_5end |
EntrezGene: | TOP2A |
HGNC: | 11989 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data