FFCP PHASE1:Hg19::chr1:109241850..109241862,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:109241850..109241862,+
|short_description=p6@PRPF38B
|description=CAGE_peak_6_at_PRPF38B_5end
|association_with_transcript=-341bp_to_AY211915_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55119 | |EntrezGene=55119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25512 | |HGNC=25512 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VTL8 | |UniProt=Q5VTL8 | ||
|association_with_transcript=-341bp_to_AY211915_5end | |||
|cluster_id=chr1:109241850..109241862,+ | |||
|coexpression_cluster_id=C1037 | |||
|description=CAGE_peak_6_at_PRPF38B_5end | |||
|id=chr1:109241850..109241862,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.26e-07!53;CL:0000051!1.26e-07!53;CL:0000838!3.11e-07!52;CL:0002087!4.00e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.84e-09,53;CL:0000051,6.84e-09,53;CL:0000838,2.30e-08,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.37e-13!239;DOID:162!6.94e-13!235;DOID:0050687!1.24e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@PRPF38B | |||
}} | }} |
Latest revision as of 19:57, 15 September 2015
Short description: | p6@PRPF38B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PRPF38B_5end |
Coexpression cluster: | C1037_acute_medulloblastoma_Monocytederived_CD4_diffuse_testicular_small |
Association with transcript: | -341bp_to_AY211915_5end |
EntrezGene: | PRPF38B |
HGNC: | 25512 |
UniProt: | Q5VTL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.84e-09 | 53 |
common lymphoid progenitor | 6.84e-09 | 53 |
lymphoid lineage restricted progenitor cell | 2.30e-08 | 52 |