FFCP PHASE1:Hg19::chr3:50374715..50374736,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11186 | |EntrezGene=11186 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9882 | |HGNC=9882 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TZT2 | |UniProt=Q5TZT2 | ||
|association_with_transcript=13bp_to_BT020047,BT020048_5end | |association_with_transcript=13bp_to_BT020047,BT020048_5end | ||
|cluster_id=chr3:50374715..50374736,- | |||
|description=CAGE_peak_4_at_RASSF1_5end | |description=CAGE_peak_4_at_RASSF1_5end | ||
|id=chr3:50374715..50374736,- | |id=chr3:50374715..50374736,- | ||
|ontology_enrichment_celltype=CL:0000359;2.38e-10;32!CL:0000192;7.93e-09;43 | |ontology_enrichment_celltype=CL:0000144!4.85e-12!625;CL:0002371!8.63e-12!591;CL:0000012!3.26e-11!682;CL:0000548!6.60e-11!679;CL:0000004!6.60e-11!679;CL:0000255!6.60e-11!679;CL:0000192!1.49e-10!42;CL:0000514!1.49e-10!42;CL:0000055!7.81e-10!180;CL:0000680!3.05e-09!57;CL:0000056!3.05e-09!57;CL:0000355!3.05e-09!57;CL:0000359!3.06e-09!32;CL:0000222!1.49e-08!119;CL:0000187!2.48e-08!54;CL:0000003!2.93e-08!722;CL:0000183!2.75e-07!59;CL:0000220!5.99e-07!246;CL:0000393!9.51e-07!60;CL:0000211!9.51e-07!60 | ||
| | |ontology_enrichment_celltype_v019=CL:0000359;2.38e-10;32!CL:0000192;7.93e-09;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.24e-11,43;CL:0000514,1.24e-11,43;CL:0000359,6.33e-11,32;CL:0000680,7.19e-10,58;CL:0000056,7.19e-10,58;CL:0000355,7.19e-10,58;CL:0000187,1.13e-08,55;CL:0000048,2.50e-08,427;CL:0000723,1.08e-07,433;CL:0000034,1.65e-07,441;CL:0000222,1.74e-07,121;CL:0000393,7.75e-07,61;CL:0000211,7.75e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;7.93e-09;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001637;6.31e-09;42!UBERON:0003509;6.31e-09;42!UBERON:0004572;6.31e-09;42!UBERON:0004573;4.31e-08;33!UBERON:0004571;4.31e-08;33 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.43e-10!42;UBERON:0003509!1.43e-10!42;UBERON:0004572!1.43e-10!42;UBERON:0000055!4.78e-10!69;UBERON:0002049!6.29e-10!79;UBERON:0007798!6.29e-10!79;UBERON:0001009!2.45e-09!113;UBERON:0001981!3.31e-09!60;UBERON:0007500!3.31e-09!60;UBERON:0004537!3.31e-09!60;UBERON:0006965!3.31e-09!60;UBERON:0004535!4.38e-09!110;UBERON:0000914!5.41e-09!83;UBERON:0002329!5.41e-09!83;UBERON:0003077!5.41e-09!83;UBERON:0003059!5.41e-09!83;UBERON:0007282!5.41e-09!83;UBERON:0009618!5.41e-09!83;UBERON:0007285!5.41e-09!83;UBERON:0004872!8.50e-09!84;UBERON:0004573!1.06e-08!33;UBERON:0004571!1.06e-08!33;UBERON:0000486!4.13e-08!82;UBERON:0004290!1.11e-07!70;UBERON:0003914!2.56e-07!118;UBERON:0001134!2.64e-07!61;UBERON:0002036!2.64e-07!61;UBERON:0003082!2.64e-07!61;UBERON:0005256!3.93e-07!143;UBERON:0002385!4.72e-07!63;UBERON:0001015!4.72e-07!63;UBERON:0000383!4.72e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.31e-09;42!UBERON:0003509;6.31e-09;42!UBERON:0004572;6.31e-09;42!UBERON:0004573;4.31e-08;33!UBERON:0004571;4.31e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,5.78e-12,42;UBERON:0003509,5.78e-12,42;UBERON:0004572,5.78e-12,42;UBERON:0001009,6.23e-11,112;UBERON:0004872,8.68e-11,83;UBERON:0007500,9.59e-11,59;UBERON:0001981,9.59e-11,59;UBERON:0004537,9.59e-11,59;UBERON:0006965,9.59e-11,59;UBERON:0002049,1.14e-10,78;UBERON:0007798,1.14e-10,78;UBERON:0004535,1.21e-10,109;UBERON:0000055,2.42e-10,68;UBERON:0004573,4.41e-09,33;UBERON:0004571,4.41e-09,33;UBERON:0000486,1.14e-08,83;UBERON:0002385,1.65e-08,64;UBERON:0001015,1.65e-08,64;UBERON:0000383,1.65e-08,64;UBERON:0001134,1.69e-08,62;UBERON:0002036,1.69e-08,62;UBERON:0003082,1.69e-08,62;UBERON:0007524,4.68e-08,73;UBERON:0007503,4.69e-08,78;UBERON:0002329,6.80e-08,71;UBERON:0003059,6.80e-08,71;UBERON:0007282,6.80e-08,71;UBERON:0004290,6.80e-08,71;UBERON:0009618,6.80e-08,71;UBERON:0003914,6.94e-08,117;UBERON:0003077,1.26e-07,72;UBERON:0007285,1.26e-07,72 | |||
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| ||
|short_description=p4@RASSF1 | |short_description=p4@RASSF1 | ||
}} | }} |
Latest revision as of 19:50, 18 September 2015
Short description: | p4@RASSF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RASSF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_BT020047, BT020048_5end |
EntrezGene: | RASSF1 |
HGNC: | 9882 |
UniProt: | Q5TZT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.24e-11 | 43 |
smooth muscle myoblast | 1.24e-11 | 43 |
vascular associated smooth muscle cell | 6.33e-11 | 32 |
muscle precursor cell | 7.19e-10 | 58 |
myoblast | 7.19e-10 | 58 |
multi-potent skeletal muscle stem cell | 7.19e-10 | 58 |
muscle cell | 1.13e-08 | 55 |
multi fate stem cell | 2.50e-08 | 427 |
somatic stem cell | 1.08e-07 | 433 |
stem cell | 1.65e-07 | 441 |
mesodermal cell | 1.74e-07 | 121 |
electrically responsive cell | 7.75e-07 | 61 |
electrically active cell | 7.75e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
artery | 5.78e-12 | 42 |
arterial blood vessel | 5.78e-12 | 42 |
arterial system | 5.78e-12 | 42 |
circulatory system | 6.23e-11 | 112 |
splanchnic layer of lateral plate mesoderm | 8.68e-11 | 83 |
epithelial tube open at both ends | 9.59e-11 | 59 |
blood vessel | 9.59e-11 | 59 |
blood vasculature | 9.59e-11 | 59 |
vascular cord | 9.59e-11 | 59 |
vasculature | 1.14e-10 | 78 |
vascular system | 1.14e-10 | 78 |
cardiovascular system | 1.21e-10 | 109 |
vessel | 2.42e-10 | 68 |
systemic artery | 4.41e-09 | 33 |
systemic arterial system | 4.41e-09 | 33 |
multilaminar epithelium | 1.14e-08 | 83 |
muscle tissue | 1.65e-08 | 64 |
musculature | 1.65e-08 | 64 |
musculature of body | 1.65e-08 | 64 |
skeletal muscle tissue | 1.69e-08 | 62 |
striated muscle tissue | 1.69e-08 | 62 |
myotome | 1.69e-08 | 62 |
dense mesenchyme tissue | 4.68e-08 | 73 |
epithelial vesicle | 4.69e-08 | 78 |
somite | 6.80e-08 | 71 |
presomitic mesoderm | 6.80e-08 | 71 |
presumptive segmental plate | 6.80e-08 | 71 |
dermomyotome | 6.80e-08 | 71 |
trunk paraxial mesoderm | 6.80e-08 | 71 |
epithelial tube | 6.94e-08 | 117 |
paraxial mesoderm | 1.26e-07 | 72 |
presumptive paraxial mesoderm | 1.26e-07 | 72 |