FFCP PHASE1:Hg19::chr10:82007552..82007558,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-113bp_to_ENST00000441206_5end | |association_with_transcript=-113bp_to_ENST00000441206_5end | ||
|cluster_id=chr10:82007552..82007558,- | |||
|description=CAGE_peak_1_at_ENST00000441206_5end | |description=CAGE_peak_1_at_ENST00000441206_5end | ||
|id=chr10:82007552..82007558,- | |id=chr10:82007552..82007558,- | ||
|ontology_enrichment_celltype=CL:0000115;1.00e-08;36!CL:0002494;5.69e-08;16!CL:0002139;4.96e-07;24!CL:0000071;6.07e-07;18!CL:0002078;8.73e-07;45 | |ontology_enrichment_celltype=CL:0000548!2.34e-17!679;CL:0000004!2.34e-17!679;CL:0000255!2.34e-17!679;CL:0000012!8.44e-17!682;CL:0000222!9.66e-13!119;CL:0000220!2.24e-12!246;CL:0002321!3.65e-12!248;CL:0000144!2.03e-11!625;CL:0000055!5.11e-11!180;CL:0000066!9.42e-11!254;CL:0000003!2.56e-10!722;CL:0002371!4.15e-10!591;CL:0000063!7.63e-09!578;CL:0000057!1.03e-08!75;CL:0000213!1.15e-08!57;CL:0000215!1.15e-08!57;CL:0002078!3.69e-08!44;CL:0000115!5.79e-08!35 | ||
| | |ontology_enrichment_celltype_v019=CL:0000115;1.00e-08;36!CL:0002494;5.69e-08;16!CL:0002139;4.96e-07;24!CL:0000071;6.07e-07;18!CL:0002078;8.73e-07;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.31e-16,121;CL:0000057,9.78e-10,76;CL:0002321,1.11e-09,250;CL:0000115,1.89e-09,36;CL:0000213,3.03e-09,58;CL:0000215,3.03e-09,58;CL:0002078,5.42e-09,45;CL:0002494,8.46e-08,16;CL:0000680,2.79e-07,58;CL:0000056,2.79e-07,58;CL:0000355,2.79e-07,58;CL:0000187,3.72e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002546;6.07e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003914;1.77e-07;74!UBERON:0000487;2.85e-07;22!UBERON:0004638;6.07e-07;18!UBERON:0001986;6.07e-07;18!UBERON:0004852;6.07e-07;18 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!7.94e-12!118;UBERON:0000490!1.12e-11!138;UBERON:0001009!8.08e-11!113;UBERON:0004535!1.94e-10!110;UBERON:0004872!2.41e-10!84;UBERON:0003104!9.42e-10!238;UBERON:0009142!9.42e-10!238;UBERON:0005256!1.17e-09!143;UBERON:0002049!1.88e-09!79;UBERON:0007798!1.88e-09!79;UBERON:0000486!2.09e-08!82;UBERON:0000055!4.79e-08!69;UBERON:0004290!1.58e-07!70;UBERON:0000914!1.61e-07!83;UBERON:0002329!1.61e-07!83;UBERON:0003077!1.61e-07!83;UBERON:0003059!1.61e-07!83;UBERON:0007282!1.61e-07!83;UBERON:0009618!1.61e-07!83;UBERON:0007285!1.61e-07!83;UBERON:0002100!4.65e-07!216;UBERON:0003102!6.61e-07!95;UBERON:0000119!6.73e-07!312;UBERON:0001981!7.66e-07!60;UBERON:0007500!7.66e-07!60;UBERON:0004537!7.66e-07!60;UBERON:0006965!7.66e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.77e-07;74!UBERON:0000487;2.85e-07;22!UBERON:0004638;6.07e-07;18!UBERON:0001986;6.07e-07;18!UBERON:0004852;6.07e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.44e-16,117;UBERON:0004535,1.47e-14,109;UBERON:0004872,2.08e-14,83;UBERON:0001009,2.88e-14,112;UBERON:0002049,1.10e-13,78;UBERON:0007798,1.10e-13,78;UBERON:0000490,1.43e-13,148;UBERON:0007503,7.24e-13,78;UBERON:0000055,1.70e-11,68;UBERON:0000119,6.52e-11,309;UBERON:0007500,1.59e-10,59;UBERON:0001981,1.59e-10,59;UBERON:0004537,1.59e-10,59;UBERON:0006965,1.59e-10,59;UBERON:0000483,2.69e-10,306;UBERON:0002329,4.14e-10,71;UBERON:0003059,4.14e-10,71;UBERON:0007282,4.14e-10,71;UBERON:0004290,4.14e-10,71;UBERON:0009618,4.14e-10,71;UBERON:0007524,4.52e-10,73;UBERON:0000486,7.61e-10,83;UBERON:0003077,8.82e-10,72;UBERON:0007285,8.82e-10,72;UBERON:0005256,1.62e-09,122;UBERON:0003104,4.53e-08,160;UBERON:0009142,4.53e-08,160;UBERON:0001637,7.71e-08,42;UBERON:0003509,7.71e-08,42;UBERON:0004572,7.71e-08,42;UBERON:0001134,3.17e-07,62;UBERON:0002036,3.17e-07,62;UBERON:0003082,3.17e-07,62;UBERON:0000487,3.50e-07,22 | |||
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| ||
|short_description=p1@ENST00000441206 | |short_description=p1@ENST00000441206 | ||
}} | }} |
Latest revision as of 16:07, 23 July 2015
Short description: | p1@ENST00000441206 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000441206_5end |
Coexpression cluster: | NA |
Association with transcript: | -113bp_to_ENST00000441206_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.31e-16 | 121 |
fibroblast | 9.78e-10 | 76 |
embryonic cell | 1.11e-09 | 250 |
endothelial cell | 1.89e-09 | 36 |
lining cell | 3.03e-09 | 58 |
barrier cell | 3.03e-09 | 58 |
meso-epithelial cell | 5.42e-09 | 45 |
cardiocyte | 8.46e-08 | 16 |
muscle precursor cell | 2.79e-07 | 58 |
myoblast | 2.79e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.79e-07 | 58 |
muscle cell | 3.72e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.44e-16 | 117 |
cardiovascular system | 1.47e-14 | 109 |
splanchnic layer of lateral plate mesoderm | 2.08e-14 | 83 |
circulatory system | 2.88e-14 | 112 |
vasculature | 1.10e-13 | 78 |
vascular system | 1.10e-13 | 78 |
unilaminar epithelium | 1.43e-13 | 148 |
epithelial vesicle | 7.24e-13 | 78 |
vessel | 1.70e-11 | 68 |
cell layer | 6.52e-11 | 309 |
epithelial tube open at both ends | 1.59e-10 | 59 |
blood vessel | 1.59e-10 | 59 |
blood vasculature | 1.59e-10 | 59 |
vascular cord | 1.59e-10 | 59 |
epithelium | 2.69e-10 | 306 |
somite | 4.14e-10 | 71 |
presomitic mesoderm | 4.14e-10 | 71 |
presumptive segmental plate | 4.14e-10 | 71 |
dermomyotome | 4.14e-10 | 71 |
trunk paraxial mesoderm | 4.14e-10 | 71 |
dense mesenchyme tissue | 4.52e-10 | 73 |
multilaminar epithelium | 7.61e-10 | 83 |
paraxial mesoderm | 8.82e-10 | 72 |
presumptive paraxial mesoderm | 8.82e-10 | 72 |
trunk mesenchyme | 1.62e-09 | 122 |
mesenchyme | 4.53e-08 | 160 |
entire embryonic mesenchyme | 4.53e-08 | 160 |
artery | 7.71e-08 | 42 |
arterial blood vessel | 7.71e-08 | 42 |
arterial system | 7.71e-08 | 42 |
skeletal muscle tissue | 3.17e-07 | 62 |
striated muscle tissue | 3.17e-07 | 62 |
myotome | 3.17e-07 | 62 |
simple squamous epithelium | 3.50e-07 | 22 |