FFCP PHASE1:Hg19::chr10:100204220..100204230,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:100204220..100204230,- | |||
|coexpression_cluster_id=C54 | |coexpression_cluster_id=C54 | ||
|description=CAGE_peak_at_chr10:100204220..100204230,- | |description=CAGE_peak_at_chr10:100204220..100204230,- | ||
|id=chr10:100204220..100204230,- | |id=chr10:100204220..100204230,- | ||
|ontology_enrichment_celltype=CL:0000990;8.03e-59;8!CL:0000840;3.84e-50;5!CL:0000451;2.70e-48;10!CL:0000453;7.25e-08;5!CL:0000235;9.23e-07;6 | |ontology_enrichment_celltype=CL:0000990!2.59e-25!8;CL:0000451!1.29e-20!10;CL:0000738!9.10e-15!140;CL:0000453!4.30e-12!5;CL:0002032!6.85e-12!165;CL:0000837!6.85e-12!165;CL:0000037!3.10e-11!172;CL:0000566!3.10e-11!172;CL:0002087!4.10e-11!119;CL:0002031!1.59e-10!124;CL:0000988!2.19e-10!182;CL:0000840!2.34e-10!5;CL:0001029!2.34e-10!5;CL:0000235!3.69e-10!10;CL:0000839!1.48e-08!70;CL:0000557!2.08e-08!71;CL:0002194!5.17e-08!63;CL:0000576!5.17e-08!63;CL:0000040!5.17e-08!63;CL:0000559!5.17e-08!63;CL:0000763!5.35e-08!112;CL:0000049!5.35e-08!112;CL:0000766!9.82e-08!76;CL:0002009!1.02e-07!65;CL:0000946!3.84e-07!1;CL:0000786!3.84e-07!1;CL:0000980!3.84e-07!1 | ||
| | |ontology_enrichment_celltype_v019=CL:0000990;8.03e-59;8!CL:0000840;3.84e-50;5!CL:0000451;2.70e-48;10!CL:0000453;7.25e-08;5!CL:0000235;9.23e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000990,7.45e-59,8;CL:0000840,3.84e-50,5;CL:0001029,3.84e-50,5;CL:0000451,2.54e-48,10;CL:0002194,2.15e-09,59;CL:0000576,2.15e-09,59;CL:0000040,2.15e-09,59;CL:0000559,2.15e-09,59;CL:0002009,4.15e-09,61;CL:0000839,1.82e-08,66;CL:0000557,2.38e-08,67;CL:0000763,5.11e-08,108;CL:0000049,5.11e-08,108;CL:0000453,7.01e-08,5;CL:0000766,8.24e-08,72;CL:0000235,9.49e-07,6 | ||
|ontology_enrichment_uberon=UBERON:0002106;2.59e-12;3!UBERON:0004177;6.55e-08;5!UBERON:0005057;6.55e-08;5 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:12603!2.83e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.96e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.59e-12;3!UBERON:0004177;6.55e-08;5!UBERON:0005057;6.55e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.59e-12,3;UBERON:0004854,2.59e-12,3;UBERON:0009034,2.59e-12,3;UBERON:0002095,2.59e-12,3;UBERON:0004782,2.59e-12,3;UBERON:0003281,2.59e-12,3;UBERON:0009664,2.59e-12,3;UBERON:0002296,2.59e-12,3;UBERON:0005602,2.59e-12,3;UBERON:0001179,2.59e-12,3;UBERON:0006293,2.59e-12,3;UBERON:0002405,3.03e-09,93;UBERON:0002390,8.48e-09,98;UBERON:0003061,8.48e-09,98;UBERON:0002193,5.03e-08,108;UBERON:0002371,1.98e-07,76;UBERON:0001474,6.33e-07,82 | |||
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|short_description=p@chr10:100204220..100204230,- | |short_description=p@chr10:100204220..100204230,- | ||
}} | }} |
Latest revision as of 09:22, 23 July 2015
Short description: | p@chr10:100204220..100204230, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:100204220..100204230, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 7.45e-59 | 8 |
immature conventional dendritic cell | 3.84e-50 | 5 |
common dendritic progenitor | 3.84e-50 | 5 |
dendritic cell | 2.54e-48 | 10 |
monopoietic cell | 2.15e-09 | 59 |
monocyte | 2.15e-09 | 59 |
monoblast | 2.15e-09 | 59 |
promonocyte | 2.15e-09 | 59 |
macrophage dendritic cell progenitor | 4.15e-09 | 61 |
myeloid lineage restricted progenitor cell | 1.82e-08 | 66 |
granulocyte monocyte progenitor cell | 2.38e-08 | 67 |
myeloid cell | 5.11e-08 | 108 |
common myeloid progenitor | 5.11e-08 | 108 |
Langerhans cell | 7.01e-08 | 5 |
myeloid leukocyte | 8.24e-08 | 72 |
macrophage | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.59e-12 | 3 |
gastrointestinal system mesentery | 2.59e-12 | 3 |
stomach region | 2.59e-12 | 3 |
mesentery | 2.59e-12 | 3 |
gastrointestinal system serosa | 2.59e-12 | 3 |
mesentery of stomach | 2.59e-12 | 3 |
gut mesentery | 2.59e-12 | 3 |
dorsal mesentery | 2.59e-12 | 3 |
dorsal mesogastrium | 2.59e-12 | 3 |
peritoneal cavity | 2.59e-12 | 3 |
spleen primordium | 2.59e-12 | 3 |
immune system | 3.03e-09 | 93 |
hematopoietic system | 8.48e-09 | 98 |
blood island | 8.48e-09 | 98 |
hemolymphoid system | 5.03e-08 | 108 |
bone marrow | 1.98e-07 | 76 |
bone element | 6.33e-07 | 82 |