FFCP PHASE1:Hg19::chr1:101837029..101837058,+: Difference between revisions
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|id=chr1:101837029..101837058,+
|short_description=p@chr1:101837029..101837058,+
|description=CAGE_peak_at_chr1:101837029..101837058,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:101837029..101837058,+ | |||
|coexpression_cluster_id=C359 | |||
|description=CAGE_peak_at_chr1:101837029..101837058,+ | |||
|id=chr1:101837029..101837058,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.77e-22!24;CL:0000826!1.77e-22!24;CL:0000838!5.35e-13!52;CL:0000946!7.89e-13!1;CL:0000786!7.89e-13!1;CL:0000980!7.89e-13!1;CL:0000542!9.77e-13!53;CL:0000051!9.77e-13!53;CL:0000738!4.26e-08!140;CL:0002087!5.14e-08!119;CL:0002031!1.22e-07!124;CL:0000785!4.83e-07!2;CL:0000955!4.83e-07!2;CL:0000818!4.83e-07!2;CL:0000954!4.83e-07!2;CL:0000816!4.83e-07!2;CL:0000054!8.06e-07!2;CL:0000137!8.06e-07!2;CL:0000092!8.06e-07!2;CL:0002535!9.02e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.17e-37;24!CL:0000946;2.78e-26;1!CL:0000786;2.78e-26;1!CL:0000542;7.98e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.17e-37,24;CL:0000826,3.17e-37,24;CL:0000946,2.78e-26,1;CL:0000786,2.78e-26,1;CL:0000980,2.78e-26,1;CL:0000838,2.51e-17,52;CL:0000542,5.29e-17,53;CL:0000051,5.29e-17,53;CL:0000785,7.30e-14,2;CL:0000955,7.30e-14,2;CL:0000818,7.30e-14,2;CL:0000954,7.30e-14,2;CL:0000816,7.30e-14,2;CL:0000817,1.10e-09,3;CL:0000738,6.88e-09,136;CL:0002087,8.22e-08,115;CL:0002031,1.73e-07,120;CL:0000037,3.48e-07,168;CL:0000988,8.17e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000954;7.30e-14;2!CL:0000051;7.98e-07;53 | |||
|ontology_enrichment_disease=DOID:630!7.03e-13!1;DOID:0050177!7.03e-13!1;DOID:0050427!7.03e-13!1;DOID:2355!9.92e-13!1;DOID:0060058!1.02e-10!10;DOID:74!5.41e-07!2;DOID:200!8.06e-07!2;DOID:4305!8.06e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:630;2.16e-26;1!DOID:0050177;2.16e-26;1!DOID:0050427;2.16e-26;1!DOID:2355;5.93e-26;1!DOID:0060058;1.01e-22;10!DOID:74;1.07e-13;2!DOID:1287;1.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.16e-26,1;DOID:0050177,2.16e-26,1;DOID:0050427,2.16e-26,1;DOID:2355,4.61e-26,1;DOID:0060058,9.33e-23,10;DOID:74,9.40e-14,2;DOID:1287,1.59e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.08e-14!7;UBERON:0002370!7.95e-12!4;UBERON:0005058!7.95e-12!4;UBERON:0009113!7.95e-12!4;UBERON:0003295!7.95e-12!4;UBERON:0005562!7.95e-12!4;UBERON:0003351!3.50e-08!6;UBERON:0006955!9.02e-07!2;UBERON:0004801!9.02e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.81e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.81e-09,3;UBERON:0004854,1.81e-09,3;UBERON:0009034,1.81e-09,3;UBERON:0002095,1.81e-09,3;UBERON:0004782,1.81e-09,3;UBERON:0003281,1.81e-09,3;UBERON:0009664,1.81e-09,3;UBERON:0002296,1.81e-09,3;UBERON:0005602,1.81e-09,3;UBERON:0001179,1.81e-09,3;UBERON:0006293,1.81e-09,3 | |||
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|short_description=p@chr1:101837029..101837058,+ | |||
}} | }} |
Latest revision as of 19:01, 27 July 2015
Short description: | p@chr1:101837029..101837058, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:101837029..101837058, + |
Coexpression cluster: | C359_xeroderma_tonsil_acute_colon_lymph_trachea_bladder |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.17e-37 | 24 |
pro-B cell | 3.17e-37 | 24 |
antibody secreting cell | 2.78e-26 | 1 |
plasma cell | 2.78e-26 | 1 |
plasmablast | 2.78e-26 | 1 |
lymphoid lineage restricted progenitor cell | 2.51e-17 | 52 |
lymphocyte | 5.29e-17 | 53 |
common lymphoid progenitor | 5.29e-17 | 53 |
mature B cell | 7.30e-14 | 2 |
pre-B-II cell | 7.30e-14 | 2 |
transitional stage B cell | 7.30e-14 | 2 |
small pre-B-II cell | 7.30e-14 | 2 |
immature B cell | 7.30e-14 | 2 |
precursor B cell | 1.10e-09 | 3 |
leukocyte | 6.88e-09 | 136 |
nongranular leukocyte | 8.22e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.73e-07 | 120 |
hematopoietic stem cell | 3.48e-07 | 168 |
hematopoietic cell | 8.17e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.81e-09 | 3 |
gastrointestinal system mesentery | 1.81e-09 | 3 |
stomach region | 1.81e-09 | 3 |
mesentery | 1.81e-09 | 3 |
gastrointestinal system serosa | 1.81e-09 | 3 |
mesentery of stomach | 1.81e-09 | 3 |
gut mesentery | 1.81e-09 | 3 |
dorsal mesentery | 1.81e-09 | 3 |
dorsal mesogastrium | 1.81e-09 | 3 |
peritoneal cavity | 1.81e-09 | 3 |
spleen primordium | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.16e-26 | 1 |
monogenic disease | 2.16e-26 | 1 |
xeroderma pigmentosum | 2.16e-26 | 1 |
anemia | 4.61e-26 | 1 |
lymphoma | 9.33e-23 | 10 |
hematopoietic system disease | 9.40e-14 | 2 |
cardiovascular system disease | 1.59e-07 | 4 |