FFCP PHASE1:Hg19::chr14:106453005..106453010,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_HM995871_5end | |association_with_transcript=-26bp_to_HM995871_5end | ||
|cluster_id=chr14:106453005..106453010,- | |||
|coexpression_cluster_id=C169 | |coexpression_cluster_id=C169 | ||
|description=CAGE_peak_1_at_HM995871_5end | |description=CAGE_peak_1_at_HM995871_5end | ||
|id=chr14:106453005..106453010,- | |id=chr14:106453005..106453010,- | ||
|ontology_enrichment_celltype=CL:0000784;6.01e-55;3!CL:0002032;3.56e-19;1!CL:0002127;3.56e-19;1!CL:0000817;3.56e-19;1!CL:0000911;3.56e-19;1!CL:0000557;3.56e-19;1!CL:0000814;3.56e-19;1!CL:0000451;1.45e-15;10!CL:0000084;7.47e-12;25!CL:0000542;1.39e-08;53 | |ontology_enrichment_celltype=CL:0000037!1.63e-11!172;CL:0000566!1.63e-11!172;CL:0000988!2.17e-10!182;CL:0000784!4.97e-10!3;CL:0000767!5.85e-09!3;CL:0002032!5.07e-08!165;CL:0000837!5.07e-08!165;CL:0000084!1.47e-07!25;CL:0000827!1.47e-07!25 | ||
| | |ontology_enrichment_celltype_v019=CL:0000784;6.01e-55;3!CL:0002032;3.56e-19;1!CL:0002127;3.56e-19;1!CL:0000817;3.56e-19;1!CL:0000911;3.56e-19;1!CL:0000557;3.56e-19;1!CL:0000814;3.56e-19;1!CL:0000451;1.45e-15;10!CL:0000084;7.47e-12;25!CL:0000542;1.39e-08;53 | ||
|ontology_enrichment_disease=DOID:2355;8.94e-20;1!DOID:74;1.43e-10;2!DOID:0060058;3.20e-08;10 | |ontology_enrichment_celltype_v019_2=CL:0000784,6.02e-55,3;CL:0002127,5.62e-19,1;CL:0000914,5.62e-19,1;CL:0000911,5.62e-19,1;CL:0000814,5.62e-19,1;CL:0002042,5.62e-19,1;CL:0002039,5.62e-19,1;CL:0002040,5.62e-19,1;CL:0002041,5.62e-19,1;CL:0000451,1.45e-15,10;CL:0000838,2.46e-12,52;CL:0000542,4.22e-12,53;CL:0000051,4.22e-12,53;CL:0000084,8.49e-12,25;CL:0000827,8.49e-12,25;CL:0000893,3.58e-10,2;CL:0002489,3.58e-10,2;CL:0000809,3.58e-10,2;CL:0000808,3.58e-10,2;CL:0000894,3.58e-10,2;CL:0000806,3.58e-10,2;CL:0000807,3.58e-10,2;CL:0000805,3.58e-10,2;CL:0002425,3.58e-10,2;CL:0000738,4.14e-10,136;CL:0000037,4.90e-10,168;CL:0000988,1.72e-09,177;CL:0000817,2.47e-07,3;CL:0002087,2.83e-07,115;CL:0002031,5.90e-07,120 | ||
|ontology_enrichment_development_v019=CL:0002425;2.85e-10;2!CL:0000051;1.39e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!3.82e-23!51;DOID:0060083!3.82e-23!51;DOID:162!6.38e-20!235;DOID:0050686!1.00e-19!137;DOID:14566!3.15e-19!239;DOID:1240!1.24e-16!39;DOID:0060058!1.47e-09!10;DOID:1036!6.34e-09!8;DOID:0050687!8.35e-08!143;DOID:305!2.59e-07!106;DOID:8692!4.95e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2355;8.94e-20;1!DOID:74;1.43e-10;2!DOID:0060058;3.20e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,8.95e-20,1;DOID:74,1.43e-10,2;DOID:2531,6.27e-09,51;DOID:0060083,6.27e-09,51;DOID:0060058,3.37e-08,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@HM995871 | |short_description=p1@HM995871 | ||
}} | }} |
Latest revision as of 18:43, 24 July 2015
Short description: | p1@HM995871 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HM995871_5end |
Coexpression cluster: | C169_hereditary_adult_gall_lymphangiectasia_chronic_b_choriocarcinoma |
Association with transcript: | -26bp_to_HM995871_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 6.02e-55 | 3 |
innate effector T cell | 5.62e-19 | 1 |
immature NK T cell | 5.62e-19 | 1 |
effector T cell | 5.62e-19 | 1 |
mature NK T cell | 5.62e-19 | 1 |
immature NK T cell stage IV | 5.62e-19 | 1 |
immature NK T cell stage I | 5.62e-19 | 1 |
immature NK T cell stage II | 5.62e-19 | 1 |
immature NK T cell stage III | 5.62e-19 | 1 |
dendritic cell | 1.45e-15 | 10 |
lymphoid lineage restricted progenitor cell | 2.46e-12 | 52 |
lymphocyte | 4.22e-12 | 53 |
common lymphoid progenitor | 4.22e-12 | 53 |
T cell | 8.49e-12 | 25 |
pro-T cell | 8.49e-12 | 25 |
thymocyte | 3.58e-10 | 2 |
double negative thymocyte | 3.58e-10 | 2 |
double-positive, alpha-beta thymocyte | 3.58e-10 | 2 |
DN4 thymocyte | 3.58e-10 | 2 |
DN1 thymic pro-T cell | 3.58e-10 | 2 |
DN2 thymocyte | 3.58e-10 | 2 |
DN3 thymocyte | 3.58e-10 | 2 |
immature single positive thymocyte | 3.58e-10 | 2 |
early T lineage precursor | 3.58e-10 | 2 |
leukocyte | 4.14e-10 | 136 |
hematopoietic stem cell | 4.90e-10 | 168 |
hematopoietic cell | 1.72e-09 | 177 |
precursor B cell | 2.47e-07 | 3 |
nongranular leukocyte | 2.83e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 5.90e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
anemia | 8.95e-20 | 1 |
hematopoietic system disease | 1.43e-10 | 2 |
hematologic cancer | 6.27e-09 | 51 |
immune system cancer | 6.27e-09 | 51 |
lymphoma | 3.37e-08 | 10 |