FFCP PHASE1:Hg19::chr14:101442373..101442374,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=767597 | |EntrezGene=767597 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=33007 | |HGNC=33007 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-439bp_to_NR_003212,uc001yjj.2_5end | |association_with_transcript=-439bp_to_NR_003212,uc001yjj.2_5end | ||
|cluster_id=chr14:101442373..101442374,+ | |||
|coexpression_cluster_id=C828 | |coexpression_cluster_id=C828 | ||
|description=CAGE_peak_1_at_SNORD114-19_5end | |description=CAGE_peak_1_at_SNORD114-19_5end | ||
|id=chr14:101442373..101442374,+ | |id=chr14:101442373..101442374,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000055!5.27e-07!180 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003528;8.99e-10;34!UBERON:0002020;8.99e-10;34!UBERON:0001869;1.11e-09;32!UBERON:0002791;1.76e-09;32!UBERON:0000922;3.39e-09;49!UBERON:0002780;6.77e-09;41!UBERON:0001890;6.77e-09;41!UBERON:0000956;1.82e-08;25!UBERON:0000203;1.82e-08;25!UBERON:0001893;1.03e-07;34!UBERON:0002619;1.40e-07;22!UBERON:0001950;4.01e-07;20!UBERON:0000073;4.70e-07;53!UBERON:0002616;4.70e-07;53 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.65e-19!57;UBERON:0005068!9.65e-19!57;UBERON:0006241!9.65e-19!57;UBERON:0007135!9.65e-19!57;UBERON:0002616!1.17e-18!59;UBERON:0002020!4.57e-15!34;UBERON:0003528!4.57e-15!34;UBERON:0000955!8.87e-15!69;UBERON:0006238!8.87e-15!69;UBERON:0002346!1.33e-14!90;UBERON:0001017!1.44e-14!82;UBERON:0003080!3.02e-14!42;UBERON:0001869!4.21e-14!32;UBERON:0001893!4.22e-14!34;UBERON:0002780!5.86e-14!41;UBERON:0001890!5.86e-14!41;UBERON:0006240!5.86e-14!41;UBERON:0002791!6.51e-14!33;UBERON:0003075!8.83e-14!86;UBERON:0007284!8.83e-14!86;UBERON:0000073!9.09e-14!94;UBERON:0001016!9.09e-14!94;UBERON:0005743!2.44e-13!86;UBERON:0000924!3.90e-12!173;UBERON:0006601!3.90e-12!173;UBERON:0004121!2.07e-11!169;UBERON:0000033!2.21e-11!123;UBERON:0000153!2.24e-11!129;UBERON:0007811!2.24e-11!129;UBERON:0000956!2.65e-11!25;UBERON:0000203!2.65e-11!25;UBERON:0001950!3.03e-10!20;UBERON:0003056!4.12e-10!61;UBERON:0002619!4.23e-10!22;UBERON:0007023!5.77e-10!115;UBERON:0000475!1.72e-08!365;UBERON:0000477!2.09e-07!286;UBERON:0000468!5.92e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;8.99e-10;34!UBERON:0002020;8.99e-10;34!UBERON:0001869;1.11e-09;32!UBERON:0002791;1.76e-09;32!UBERON:0000922;3.39e-09;49!UBERON:0002780;6.77e-09;41!UBERON:0001890;6.77e-09;41!UBERON:0000956;1.82e-08;25!UBERON:0000203;1.82e-08;25!UBERON:0001893;1.03e-07;34!UBERON:0002619;1.40e-07;22!UBERON:0001950;4.01e-07;20!UBERON:0000073;4.70e-07;53!UBERON:0002616;4.70e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.91e-12,56;UBERON:0005068,4.91e-12,56;UBERON:0006241,4.91e-12,56;UBERON:0007135,4.91e-12,56;UBERON:0000073,6.80e-12,53;UBERON:0002616,6.80e-12,53;UBERON:0003528,1.05e-11,34;UBERON:0002020,1.05e-11,34;UBERON:0002346,3.00e-11,86;UBERON:0002791,3.03e-10,32;UBERON:0001869,3.03e-10,32;UBERON:0002780,4.97e-10,41;UBERON:0001890,4.97e-10,41;UBERON:0003080,4.97e-10,41;UBERON:0006240,4.97e-10,41;UBERON:0000955,6.66e-10,68;UBERON:0006238,6.66e-10,68;UBERON:0003075,6.86e-10,82;UBERON:0007284,6.86e-10,82;UBERON:0001016,7.55e-10,89;UBERON:0004121,1.09e-09,171;UBERON:0000924,1.09e-09,171;UBERON:0006601,1.09e-09,171;UBERON:0001893,2.33e-09,34;UBERON:0000956,1.22e-08,25;UBERON:0000203,1.22e-08,25;UBERON:0001017,1.52e-08,81;UBERON:0002619,8.22e-08,22;UBERON:0001950,2.41e-07,20;UBERON:0010314,7.49e-07,132;UBERON:0003056,7.68e-07,61 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.281908808191942,0,1.78784437770915,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0.662794751455832,0,0,0,0.975865597581014,0.246242116153576,0.408001382488506,0,0.85870796139317,1.36874425072884,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637812899895131,0,0,0,0,0.285012743741249,1.39241674039363,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,2.53007406669196,1.00267582127178,2.462390822334,0,0.486634870302636,1.03988298880475,1.10864698731282,2.10803485663503,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,2.84613010149368,1.00416183829401,0,0.760272105718513,0,0,0,1.96459402224975,1.57170560838319,0.450445921933289,0,0,0,0,0,0,7.9515512271251,0.633152558322899,8.34177839123278,4.58938593198102,0.354668382198357,0,0,0.24666754841716,0.622422070799533,1.34710672069688,0.326923806226917,0.151357427644931,0,0.468642863667593,0,0,0,0.587172493218824,0.809364721840658,0.421352420106746,2.44985005505872,1.22834317311768,1.23990937410919,0,0.247266929278557,0,0,0.841680569770331,2.25213335769535,0.277064115484183,0,1.83892677479412,0.600952235626387,0,2.15267562826634,0,0.211931901159562,2.70081986475962,0.824420233907511,5.92573242104947,0.18611685633159,4.38818463827292,0.194874010322397,11.107086066741,1.19664868234989,1.77810662500693,13.4903645156313,2.21654616100809,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0.088048434013226,1.03664057770386,0.576479813667846,0.50496973370552,0,0,0,0,0,0,0,0.336393253036082,0,0,2.06834745212444,0,0,0.26593811658487,1.04007436911366,0,0,0,0.714889968290738,0.542621605391443,0,0.65147236858747,0.355391948742546,0.791951872933429,0,0,0.799783929456456,0,0,0,0,0,0,0.434343920002738,1.02738161275192,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,5.19927153827018,8.02930449587228,0.315404830067869,0.35142424497814,0.601892199455438,0,0,0,0.737476674166813,1.30325421702124,0,1.02943027143257,0,0,0,0.303127571446259,0,0.30239029332968,0,1.84154367945675,0,0.128139149255701,0,0.482561763430822,0,0.154209693802656,0.177561725313127,0.574890092096664,2.59627214591811,0.581051892299796,0,0.200506470303285,0.0920809889358963,0.114814448164607,1.63882051206045,1.70461739447251,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0.082509499920588,0,0,0,0.290012154876366,0.616194468458578,0.307007349452259,0.689182862422653,0.859361958946189,3.33538396002726,0.596586391912706,0.356128142586949,0,0,0.765676274967505,0.30347334256665,0,9.4443704049192,0.6970372701606,0,0.532306030317022,1.73986598415015,0.18532421910392,0.715624433709956,3.34942532423701,3.48017367190598,1.14378116354295,0,0,0.318203247925937,0,2.69808686374972,3.0199073270966,1.88499843753098,0,0,0.421258456238981,0.975267478179181,0,0,1.09199929126389,0.141405431953713,0,0,0,0,0,1.31178950409327,0.202910376962704,0.30982349809975,0,0.286822704408103,0.294747123039363,0,1.41904425628239,1.26664581178598,0,0.379473173765715,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0,0,0,0,0,0,0,0,4.29740072527842,0.890894042497916,3.99308912729002,0.994147647766298,2.67271891179974,0,0,44.9697119312626,0.398495976502139,0,0,0.715880777515084,0,0.622079175323615,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0.344743373241465,4.37406920074882,0,1.77148277162768,2.05013945663194,1.52581736317083,1.87984741883082,4.72876190325676,1.31631238292384,0,0.139423744278603,2.15460723810632,0,0,0,0,1.27600463892768,0.183195186803725,0,0,0,0,0,0,0,0.189753732724185,4.13235105348985,0,0,0,0,0,0.353830258013357,0,0.296521128680622,0,0,0.067401132980677,74.6397211987874,1.1713222286267,0,0,0,0.789168805698781,8.46935012340647,0.91821828489147,0.31593289814244,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,1.92199335066233,3.26773461696071,0.0967563312890851,0,0,0.0969890164884194,4.14803795450051,1.80784592624426,0,0,0.759729551470544,0,0,0.640358984218058,0,0,0,1.88754497648161,0.14405479798815,0,0,0,0,0,0,1.20084057741958,2.46429682005587,0,0,0,1.95497680890578,1.14580212005842,0.717873024576814,0,0.858452096273142,0,0.940568614814168,2.88239906833923,0,0,0,0,0,0,0,4.63091580779357,0,0,0,0,0,0.789744236554321,0,0.0788057072991982,0.209818352539992,0.105600336519406,0,0,0.714695326373367,0,0.76280561296425,0,0,0,0,0.16418504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| ||
|short_description=p1@SNORD114-19 | |short_description=p1@SNORD114-19 | ||
}} | }} |
Latest revision as of 12:03, 18 September 2015
Short description: | p1@SNORD114-19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNORD114-19_5end |
Coexpression cluster: | C828_diaphragm_tongue_throat_Fibroblast_pituitary_cerebellum_testicular |
Association with transcript: | -439bp_to_NR_003212, uc001yjj.2_5end |
EntrezGene: | SNORD114-19 |
HGNC: | 33007 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 4.91e-12 | 56 |
neural rod | 4.91e-12 | 56 |
future spinal cord | 4.91e-12 | 56 |
neural keel | 4.91e-12 | 56 |
regional part of nervous system | 6.80e-12 | 53 |
regional part of brain | 6.80e-12 | 53 |
brain grey matter | 1.05e-11 | 34 |
gray matter | 1.05e-11 | 34 |
neurectoderm | 3.00e-11 | 86 |
regional part of telencephalon | 3.03e-10 | 32 |
cerebral hemisphere | 3.03e-10 | 32 |
regional part of forebrain | 4.97e-10 | 41 |
forebrain | 4.97e-10 | 41 |
anterior neural tube | 4.97e-10 | 41 |
future forebrain | 4.97e-10 | 41 |
brain | 6.66e-10 | 68 |
future brain | 6.66e-10 | 68 |
neural plate | 6.86e-10 | 82 |
presumptive neural plate | 6.86e-10 | 82 |
nervous system | 7.55e-10 | 89 |
ectoderm-derived structure | 1.09e-09 | 171 |
ectoderm | 1.09e-09 | 171 |
presumptive ectoderm | 1.09e-09 | 171 |
telencephalon | 2.33e-09 | 34 |
cerebral cortex | 1.22e-08 | 25 |
pallium | 1.22e-08 | 25 |
central nervous system | 1.52e-08 | 81 |
regional part of cerebral cortex | 8.22e-08 | 22 |
neocortex | 2.41e-07 | 20 |
structure with developmental contribution from neural crest | 7.49e-07 | 132 |
pre-chordal neural plate | 7.68e-07 | 61 |