FFCP PHASE1:Hg19::chr3:93781818..93781915,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63899 | |EntrezGene=63899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26208 | |HGNC=26208 | ||
|TSSclassifier=strong | |||
|UniProt=F8WF52,Q9H649 | |UniProt=F8WF52,Q9H649 | ||
|association_with_transcript=0bp_to_ENST00000461625,ENST00000468555,ENST00000476588,ENST00000477077,ENST00000483378,ENST00000485793,NM_022072,uc003drk.2,uc003drl.1_5end | |association_with_transcript=0bp_to_ENST00000461625,ENST00000468555,ENST00000476588,ENST00000477077,ENST00000483378,ENST00000485793,NM_022072,uc003drk.2,uc003drl.1_5end | ||
|cluster_id=chr3:93781818..93781915,+ | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_1_at_NSUN3_5end | |description=CAGE_peak_1_at_NSUN3_5end | ||
|id=chr3:93781818..93781915,+ | |id=chr3:93781818..93781915,+ | ||
|ontology_enrichment_celltype=CL:0000860;7.65e-20;33!CL:0002057;7.65e-20;33!CL:0000473;7.88e-17;39!CL:0000234;7.88e-17;39!CL:0000576;1.46e-16;48!CL:0000766;7.09e-14;69!CL:0002087;4.63e-13;104!CL:0000738;4.34e-11;136!CL:0000542;2.24e-09;53!CL:0000084;4.80e-08;25!CL:0000791;6.62e-08;18!CL:0000789;6.62e-08;18!CL:0002419;6.62e-08;18!CL:0000988;8.02e-08;177!CL:0000945;2.16e-07;24!CL:0000763;2.64e-07;100 | |ontology_enrichment_celltype=CL:0000738!7.11e-50!140;CL:0000037!6.24e-45!172;CL:0000566!6.24e-45!172;CL:0002031!2.12e-43!124;CL:0002087!5.85e-42!119;CL:0002032!1.00e-41!165;CL:0000837!1.00e-41!165;CL:0000988!2.49e-40!182;CL:0000766!1.24e-30!76;CL:0000839!1.14e-27!70;CL:0000557!2.35e-26!71;CL:0002057!3.98e-25!42;CL:0002194!5.17e-25!63;CL:0000576!5.17e-25!63;CL:0000040!5.17e-25!63;CL:0000559!5.17e-25!63;CL:0000763!8.32e-25!112;CL:0000049!8.32e-25!112;CL:0002009!1.22e-24!65;CL:0000860!1.41e-23!45;CL:0000542!2.75e-15!53;CL:0000051!2.75e-15!53;CL:0000838!3.09e-15!52;CL:0000084!5.33e-08!25;CL:0000827!5.33e-08!25;CL:0000791!7.52e-08!18;CL:0000789!7.52e-08!18;CL:0002420!7.52e-08!18;CL:0002419!7.52e-08!18;CL:0000790!7.52e-08!18;CL:0000945!2.21e-07!24;CL:0000826!2.21e-07!24 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;7.65e-20;33!CL:0002057;7.65e-20;33!CL:0000473;7.88e-17;39!CL:0000234;7.88e-17;39!CL:0000576;1.46e-16;48!CL:0000766;7.09e-14;69!CL:0002087;4.63e-13;104!CL:0000738;4.34e-11;136!CL:0000542;2.24e-09;53!CL:0000084;4.80e-08;25!CL:0000791;6.62e-08;18!CL:0000789;6.62e-08;18!CL:0002419;6.62e-08;18!CL:0000988;8.02e-08;177!CL:0000945;2.16e-07;24!CL:0000763;2.64e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.94e-51,136;CL:0000037,4.46e-46,168;CL:0002031,5.73e-45,120;CL:0002087,1.52e-43,115;CL:0002032,7.56e-43,161;CL:0000837,7.56e-43,161;CL:0000988,2.69e-42,177;CL:0000766,1.68e-32,72;CL:0000839,1.64e-29,66;CL:0000557,4.31e-28,67;CL:0002194,7.12e-27,59;CL:0000576,7.12e-27,59;CL:0000040,7.12e-27,59;CL:0000559,7.12e-27,59;CL:0002009,2.04e-26,61;CL:0000763,7.44e-26,108;CL:0000049,7.44e-26,108;CL:0000473,3.04e-25,48;CL:0000234,3.04e-25,48;CL:0000860,3.98e-25,42;CL:0002057,3.98e-25,42;CL:0000542,2.75e-15,53;CL:0000051,2.75e-15,53;CL:0000838,3.09e-15,52;CL:0000084,5.33e-08,25;CL:0000827,5.33e-08,25;CL:0000791,7.52e-08,18;CL:0000789,7.52e-08,18;CL:0002420,7.52e-08,18;CL:0002419,7.52e-08,18;CL:0000790,7.52e-08,18;CL:0000945,2.21e-07,24;CL:0000826,2.21e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;2.70e-18;42!CL:0000051;2.24e-09;53!CL:0000790;6.62e-08;18!CL:0000049;1.40e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;2.31e-08;15!UBERON:0000179;2.31e-08;15!UBERON:0000463;2.31e-08;15 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.86e-31!102;UBERON:0003061!1.86e-31!102;UBERON:0002193!6.72e-29!112;UBERON:0002371!6.58e-23!80;UBERON:0001474!3.23e-20!86;UBERON:0002405!2.00e-18!115;UBERON:0004765!2.22e-15!101;UBERON:0001434!2.22e-15!101;UBERON:0007023!5.08e-10!115;UBERON:0000178!2.35e-08!15;UBERON:0000179!2.35e-08!15;UBERON:0000463!2.35e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.31e-08;15!UBERON:0000179;2.31e-08;15!UBERON:0000463;2.31e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.97e-33,98;UBERON:0003061,6.97e-33,98;UBERON:0002193,4.11e-30,108;UBERON:0002371,2.91e-24,76;UBERON:0002405,5.18e-23,93;UBERON:0001474,2.43e-21,82;UBERON:0004765,1.82e-18,90;UBERON:0001434,3.67e-15,100;UBERON:0007023,6.04e-10,114;UBERON:0000178,2.35e-08,15;UBERON:0000179,2.35e-08,15;UBERON:0000463,2.35e-08,15 | |||
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| ||
|short_description=p1@NSUN3 | |short_description=p1@NSUN3 | ||
}} | }} |
Latest revision as of 19:56, 19 September 2015
Short description: | p1@NSUN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NSUN3_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000461625, ENST00000468555, ENST00000476588, ENST00000477077, ENST00000483378, ENST00000485793, NM_022072, uc003drk.2, uc003drl.1_5end |
EntrezGene: | NSUN3 |
HGNC: | 26208 |
UniProt: | F8WF52Q9H649 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.97e-33 | 98 |
blood island | 6.97e-33 | 98 |
hemolymphoid system | 4.11e-30 | 108 |
bone marrow | 2.91e-24 | 76 |
immune system | 5.18e-23 | 93 |
bone element | 2.43e-21 | 82 |
skeletal element | 1.82e-18 | 90 |
skeletal system | 3.67e-15 | 100 |
adult organism | 6.04e-10 | 114 |
blood | 2.35e-08 | 15 |
haemolymphatic fluid | 2.35e-08 | 15 |
organism substance | 2.35e-08 | 15 |