FFCP PHASE1:Hg19::chr21:34915123..34915145,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2618 | |EntrezGene=2618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4163 | |HGNC=4163 | ||
|TSSclassifier=strong | |||
|UniProt=C9JKQ7 | |UniProt=C9JKQ7 | ||
|association_with_transcript=0bp_to_ENST00000438059_5end | |association_with_transcript=0bp_to_ENST00000438059_5end | ||
|cluster_id=chr21:34915123..34915145,- | |||
|description=CAGE_peak_2_at_GART_5end | |description=CAGE_peak_2_at_GART_5end | ||
|id=chr21:34915123..34915145,- | |id=chr21:34915123..34915145,- | ||
|ontology_enrichment_celltype=CL:0000860;3.28e-11;33!CL:0002057;3.28e-11;33!CL:0000542;6.16e-10;53!CL:0002087;7.76e-09;104!CL:0000576;1.87e-08;48!CL:0000084;4.66e-08;25!CL:0000791;6.22e-08;18!CL:0000789;6.22e-08;18!CL:0002419;6.22e-08;18!CL:0000945;7.82e-08;24!CL:0000738;4.09e-07;136!CL:0000473;9.51e-07;39!CL:0000234;9.51e-07;39 | |ontology_enrichment_celltype=CL:0000738!1.01e-27!140;CL:0000037!1.54e-23!172;CL:0000566!1.54e-23!172;CL:0002087!4.79e-23!119;CL:0002031!5.73e-23!124;CL:0000988!2.42e-22!182;CL:0002032!3.85e-21!165;CL:0000837!3.85e-21!165;CL:0000838!2.77e-16!52;CL:0000542!3.62e-16!53;CL:0000051!3.62e-16!53;CL:0002057!2.31e-15!42;CL:0000860!1.15e-14!45;CL:0000766!3.02e-10!76;CL:0002009!1.29e-08!65;CL:0000084!5.03e-08!25;CL:0000827!5.03e-08!25;CL:0000557!5.91e-08!71;CL:0000791!7.18e-08!18;CL:0000789!7.18e-08!18;CL:0002420!7.18e-08!18;CL:0002419!7.18e-08!18;CL:0000790!7.18e-08!18;CL:0002194!7.39e-08!63;CL:0000576!7.39e-08!63;CL:0000040!7.39e-08!63;CL:0000559!7.39e-08!63;CL:0000945!7.47e-08!24;CL:0000826!7.47e-08!24;CL:0000763!8.91e-08!112;CL:0000049!8.91e-08!112;CL:0000839!1.11e-07!70 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;3.28e-11;33!CL:0002057;3.28e-11;33!CL:0000542;6.16e-10;53!CL:0002087;7.76e-09;104!CL:0000576;1.87e-08;48!CL:0000084;4.66e-08;25!CL:0000791;6.22e-08;18!CL:0000789;6.22e-08;18!CL:0002419;6.22e-08;18!CL:0000945;7.82e-08;24!CL:0000738;4.09e-07;136!CL:0000473;9.51e-07;39!CL:0000234;9.51e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.26e-29,136;CL:0000037,1.88e-24,168;CL:0002087,3.05e-24,115;CL:0002031,4.04e-24,120;CL:0000988,1.16e-23,177;CL:0002032,5.18e-22,161;CL:0000837,5.18e-22,161;CL:0000838,2.76e-16,52;CL:0000542,3.61e-16,53;CL:0000051,3.61e-16,53;CL:0000860,2.30e-15,42;CL:0002057,2.30e-15,42;CL:0000473,3.28e-11,48;CL:0000234,3.28e-11,48;CL:0000766,3.94e-11,72;CL:0002009,1.77e-09,61;CL:0000557,1.05e-08,67;CL:0002194,1.13e-08,59;CL:0000576,1.13e-08,59;CL:0000040,1.13e-08,59;CL:0000559,1.13e-08,59;CL:0000839,2.05e-08,66;CL:0000763,2.61e-08,108;CL:0000049,2.61e-08,108;CL:0000084,5.02e-08,25;CL:0000827,5.02e-08,25;CL:0000791,7.17e-08,18;CL:0000789,7.17e-08,18;CL:0002420,7.17e-08,18;CL:0002419,7.17e-08,18;CL:0000790,7.17e-08,18;CL:0000945,7.46e-08,24;CL:0000826,7.46e-08,24 | |||
|ontology_enrichment_development_v019=CL:0002057;2.21e-11;42!CL:0000051;6.16e-10;53!CL:0000790;6.22e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002780;2.09e-10;41!UBERON:0001890;2.09e-10;41!UBERON:0001893;3.23e-10;34!UBERON:0003528;6.94e-10;34!UBERON:0002020;6.94e-10;34!UBERON:0002791;7.01e-10;32!UBERON:0000073;7.60e-10;53!UBERON:0002616;7.60e-10;53!UBERON:0002619;7.81e-10;22!UBERON:0001869;8.73e-10;32!UBERON:0001950;9.87e-09;20!UBERON:0000956;2.60e-08;25!UBERON:0000203;2.60e-08;25!UBERON:0001017;4.09e-07;75 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.73e-15!57;UBERON:0005068!1.73e-15!57;UBERON:0006241!1.73e-15!57;UBERON:0007135!1.73e-15!57;UBERON:0001017!1.11e-14!82;UBERON:0005743!4.33e-14!86;UBERON:0000073!5.03e-14!94;UBERON:0001016!5.03e-14!94;UBERON:0002780!6.51e-14!41;UBERON:0001890!6.51e-14!41;UBERON:0006240!6.51e-14!41;UBERON:0000955!7.22e-13!69;UBERON:0006238!7.22e-13!69;UBERON:0003080!7.80e-13!42;UBERON:0002616!2.41e-12!59;UBERON:0002020!1.12e-11!34;UBERON:0003528!1.12e-11!34;UBERON:0001893!1.29e-11!34;UBERON:0002791!2.78e-11!33;UBERON:0001869!7.29e-11!32;UBERON:0002619!1.32e-09!22;UBERON:0001950!1.56e-08!20;UBERON:0002390!1.91e-08!102;UBERON:0003061!1.91e-08!102;UBERON:0000956!3.63e-08!25;UBERON:0000203!3.63e-08!25;UBERON:0003075!4.34e-08!86;UBERON:0007284!4.34e-08!86;UBERON:0002346!1.58e-07!90;UBERON:0003056!1.66e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.09e-10;41!UBERON:0001890;2.09e-10;41!UBERON:0001893;3.23e-10;34!UBERON:0003528;6.94e-10;34!UBERON:0002020;6.94e-10;34!UBERON:0002791;7.01e-10;32!UBERON:0000073;7.60e-10;53!UBERON:0002616;7.60e-10;53!UBERON:0002619;7.81e-10;22!UBERON:0001869;8.73e-10;32!UBERON:0001950;9.87e-09;20!UBERON:0000956;2.60e-08;25!UBERON:0000203;2.60e-08;25!UBERON:0001017;4.09e-07;75 | |||
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| ||
|short_description=p2@GART | |short_description=p2@GART | ||
}} | }} |
Latest revision as of 04:44, 18 September 2015
Short description: | p2@GART |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GART_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000438059_5end |
EntrezGene: | GART |
HGNC: | 4163 |
UniProt: | C9JKQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.67e-16 | 56 |
neural rod | 1.67e-16 | 56 |
future spinal cord | 1.67e-16 | 56 |
neural keel | 1.67e-16 | 56 |
regional part of nervous system | 1.79e-15 | 53 |
regional part of brain | 1.79e-15 | 53 |
central nervous system | 1.83e-15 | 81 |
nervous system | 2.74e-15 | 89 |
regional part of forebrain | 6.49e-14 | 41 |
forebrain | 6.49e-14 | 41 |
anterior neural tube | 6.49e-14 | 41 |
future forebrain | 6.49e-14 | 41 |
brain | 1.16e-13 | 68 |
future brain | 1.16e-13 | 68 |
brain grey matter | 1.11e-11 | 34 |
gray matter | 1.11e-11 | 34 |
telencephalon | 1.28e-11 | 34 |
regional part of telencephalon | 5.17e-11 | 32 |
cerebral hemisphere | 7.28e-11 | 32 |
regional part of cerebral cortex | 1.31e-09 | 22 |
neural plate | 2.03e-09 | 82 |
presumptive neural plate | 2.03e-09 | 82 |
hematopoietic system | 4.86e-09 | 98 |
blood island | 4.86e-09 | 98 |
neurectoderm | 9.38e-09 | 86 |
neocortex | 1.55e-08 | 20 |
cerebral cortex | 3.62e-08 | 25 |
pallium | 3.62e-08 | 25 |
pre-chordal neural plate | 4.07e-08 | 61 |
bone marrow | 5.45e-07 | 76 |