FFCP PHASE1:Hg19::chr19:925727..925784,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1820 | |EntrezGene=1820 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3031 | |HGNC=3031 | ||
|TSSclassifier=strong | |||
|UniProt=Q99856 | |UniProt=Q99856 | ||
|association_with_transcript=-252bp_to_ENST00000263620,NM_005224,uc002lql.2_5end | |association_with_transcript=-252bp_to_ENST00000263620,NM_005224,uc002lql.2_5end | ||
|cluster_id=chr19:925727..925784,+ | |||
|description=CAGE_peak_3_at_ARID3A_5end | |description=CAGE_peak_3_at_ARID3A_5end | ||
|id=chr19:925727..925784,+ | |id=chr19:925727..925784,+ | ||
|ontology_enrichment_celltype=CL:0000576;4.40e-13;48!CL:0000473;9.08e-13;39!CL:0000234;9.08e-13;39!CL:0000860;1.38e-12;33!CL:0002057;1.38e-12;33!CL:0000766;1.96e-11;69!CL:0000763;3.20e-10;100 | |ontology_enrichment_celltype=CL:0000763!8.08e-31!112;CL:0000049!8.08e-31!112;CL:0000988!1.40e-30!182;CL:0000037!1.84e-30!172;CL:0000566!1.84e-30!172;CL:0002032!1.15e-28!165;CL:0000837!1.15e-28!165;CL:0000738!3.70e-23!140;CL:0000766!1.25e-22!76;CL:0000557!3.67e-20!71;CL:0002009!9.15e-20!65;CL:0002194!3.27e-19!63;CL:0000576!3.27e-19!63;CL:0000040!3.27e-19!63;CL:0000559!3.27e-19!63;CL:0000839!2.40e-18!70;CL:0002087!1.60e-17!119;CL:0002057!6.68e-17!42;CL:0002031!9.43e-17!124;CL:0000860!4.59e-15!45 | ||
| | |ontology_enrichment_celltype_v019=CL:0000576;4.40e-13;48!CL:0000473;9.08e-13;39!CL:0000234;9.08e-13;39!CL:0000860;1.38e-12;33!CL:0002057;1.38e-12;33!CL:0000766;1.96e-11;69!CL:0000763;3.20e-10;100 | ||
|ontology_enrichment_disease=DOID:8692;4.59e-08;31!DOID:1240;7.16e-07;39 | |ontology_enrichment_celltype_v019_2=CL:0000763,5.93e-36,108;CL:0000049,5.93e-36,108;CL:0000988,8.11e-35,177;CL:0000037,4.03e-34,168;CL:0002032,4.17e-32,161;CL:0000837,4.17e-32,161;CL:0000766,4.64e-27,72;CL:0000738,4.75e-26,136;CL:0000557,3.23e-24,67;CL:0002009,1.78e-23,61;CL:0002194,7.35e-23,59;CL:0000576,7.35e-23,59;CL:0000040,7.35e-23,59;CL:0000559,7.35e-23,59;CL:0000839,5.00e-22,66;CL:0000473,3.86e-21,48;CL:0000234,3.86e-21,48;CL:0002087,2.05e-19,115;CL:0002031,9.04e-19,120;CL:0000860,1.24e-18,42;CL:0002057,1.24e-18,42 | ||
|ontology_enrichment_uberon=UBERON:0000178;5.35e-08;15!UBERON:0000179;5.35e-08;15!UBERON:0000463;5.35e-08;15 | |ontology_enrichment_development_v019=CL:0002057;9.73e-14;42!CL:0000049;1.42e-10;108 | ||
|ontology_enrichment_disease=DOID:8692!2.01e-07!31;DOID:1240!2.18e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.59e-08;31!DOID:1240;7.16e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.94e-08,39;DOID:8692,4.76e-08,31;DOID:2531,2.70e-07,51;DOID:0060083,2.70e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.27e-25!102;UBERON:0003061!1.27e-25!102;UBERON:0002193!3.24e-25!112;UBERON:0002405!2.01e-18!115;UBERON:0002371!2.35e-17!80;UBERON:0001474!4.31e-15!86;UBERON:0003081!3.57e-13!216;UBERON:0004765!3.09e-11!101;UBERON:0001434!3.09e-11!101;UBERON:0000178!2.22e-07!15;UBERON:0000179!2.22e-07!15;UBERON:0000463!2.22e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.35e-08;15!UBERON:0000179;5.35e-08;15!UBERON:0000463;5.35e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.34e-30,98;UBERON:0003061,1.34e-30,98;UBERON:0002193,2.02e-29,108;UBERON:0002405,1.43e-22,93;UBERON:0002371,4.20e-21,76;UBERON:0001474,1.84e-18,82;UBERON:0004765,4.62e-15,90;UBERON:0003081,1.62e-13,203;UBERON:0001434,6.11e-13,100;UBERON:0000178,4.35e-08,15;UBERON:0000179,4.35e-08,15;UBERON:0000463,4.35e-08,15 | |||
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| ||
|short_description=p3@ARID3A | |short_description=p3@ARID3A | ||
}} | }} |
Latest revision as of 01:50, 25 September 2015
Short description: | p3@ARID3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARID3A_5end |
Coexpression cluster: | NA |
Association with transcript: | -252bp_to_ENST00000263620, NM_005224, uc002lql.2_5end |
EntrezGene: | ARID3A |
HGNC: | 3031 |
UniProt: | Q99856 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 5.93e-36 | 108 |
common myeloid progenitor | 5.93e-36 | 108 |
hematopoietic cell | 8.11e-35 | 177 |
hematopoietic stem cell | 4.03e-34 | 168 |
hematopoietic oligopotent progenitor cell | 4.17e-32 | 161 |
hematopoietic multipotent progenitor cell | 4.17e-32 | 161 |
myeloid leukocyte | 4.64e-27 | 72 |
leukocyte | 4.75e-26 | 136 |
granulocyte monocyte progenitor cell | 3.23e-24 | 67 |
macrophage dendritic cell progenitor | 1.78e-23 | 61 |
monopoietic cell | 7.35e-23 | 59 |
monocyte | 7.35e-23 | 59 |
monoblast | 7.35e-23 | 59 |
promonocyte | 7.35e-23 | 59 |
myeloid lineage restricted progenitor cell | 5.00e-22 | 66 |
defensive cell | 3.86e-21 | 48 |
phagocyte | 3.86e-21 | 48 |
nongranular leukocyte | 2.05e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 9.04e-19 | 120 |
classical monocyte | 1.24e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-18 | 42 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.34e-30 | 98 |
blood island | 1.34e-30 | 98 |
hemolymphoid system | 2.02e-29 | 108 |
immune system | 1.43e-22 | 93 |
bone marrow | 4.20e-21 | 76 |
bone element | 1.84e-18 | 82 |
skeletal element | 4.62e-15 | 90 |
lateral plate mesoderm | 1.62e-13 | 203 |
skeletal system | 6.11e-13 | 100 |
blood | 4.35e-08 | 15 |
haemolymphatic fluid | 4.35e-08 | 15 |
organism substance | 4.35e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.94e-08 | 39 |
myeloid leukemia | 4.76e-08 | 31 |
hematologic cancer | 2.70e-07 | 51 |
immune system cancer | 2.70e-07 | 51 |