FFCP PHASE1:Hg19::chr19:8567478..8567493,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:8567478..8567493,-
|short_description=p2@PRAM1
|description=CAGE_peak_2_at_PRAM1_5end
|association_with_transcript=1bp_to_ENST00000255612,uc002mkc.2,uc002...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84106 | |EntrezGene=84106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30091 | |HGNC=30091 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000255612,uc002mkc.2,uc002mkd.2_5end | |||
|cluster_id=chr19:8567478..8567493,- | |||
|coexpression_cluster_id=C3836 | |||
|description=CAGE_peak_2_at_PRAM1_5end | |||
|id=chr19:8567478..8567493,- | |||
|ontology_enrichment_celltype=CL:0000763!1.99e-55!112;CL:0000049!1.99e-55!112;CL:0000766!2.62e-51!76;CL:0002194!8.29e-46!63;CL:0000576!8.29e-46!63;CL:0000040!8.29e-46!63;CL:0000559!8.29e-46!63;CL:0002009!1.18e-43!65;CL:0000037!1.02e-42!172;CL:0000566!1.02e-42!172;CL:0000557!2.19e-42!71;CL:0000839!2.43e-41!70;CL:0002057!3.99e-41!42;CL:0002032!8.71e-39!165;CL:0000837!8.71e-39!165;CL:0000988!3.43e-38!182;CL:0000860!4.14e-37!45;CL:0000738!1.18e-31!140;CL:0002087!8.53e-28!119;CL:0002031!1.11e-23!124;CL:0002393!3.76e-10!9;CL:0002397!3.76e-10!9;CL:0000094!3.24e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.84e-38;33!CL:0002057;2.84e-38;33!CL:0000473;1.52e-37;39!CL:0000234;1.52e-37;39!CL:0000576;5.05e-37;48!CL:0000766;3.29e-29;69!CL:0000763;7.18e-23;100!CL:0000094;1.13e-11;8!CL:0000738;4.88e-10;136!CL:0002087;6.67e-10;104!CL:0002393;2.39e-09;6!CL:0002397;2.39e-09;6!CL:0000988;1.38e-08;177!CL:0000081;6.43e-08;11!CL:0000235;9.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.91e-73,108;CL:0000049,1.91e-73,108;CL:0000766,8.93e-71,72;CL:0002194,8.74e-67,59;CL:0000576,8.74e-67,59;CL:0000040,8.74e-67,59;CL:0000559,8.74e-67,59;CL:0002009,6.28e-64,61;CL:0000473,2.05e-60,48;CL:0000234,2.05e-60,48;CL:0000557,5.86e-59,67;CL:0000839,1.52e-57,66;CL:0000860,7.38e-54,42;CL:0002057,7.38e-54,42;CL:0000037,3.54e-51,168;CL:0002032,4.34e-47,161;CL:0000837,4.34e-47,161;CL:0000988,5.19e-47,177;CL:0000738,1.34e-38,136;CL:0002087,1.65e-35,115;CL:0002031,6.50e-29,120;CL:0002393,6.83e-13,9;CL:0002397,6.83e-13,9;CL:0000094,1.17e-11,8;CL:0000134,1.24e-09,354;CL:0002320,5.43e-09,361;CL:0000081,6.60e-08,11;CL:0000235,9.04e-08,6;CL:0000219,8.19e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.35e-38;42!CL:0000049;4.77e-22;108 | |||
|ontology_enrichment_disease=DOID:8692!1.27e-11!31;DOID:1240!2.93e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.35e-12;31!DOID:1240;2.91e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.15e-12,31;DOID:1240,8.00e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.64e-46!102;UBERON:0003061!1.64e-46!102;UBERON:0002193!5.97e-42!112;UBERON:0002371!1.94e-36!80;UBERON:0007023!5.80e-35!115;UBERON:0001474!3.51e-32!86;UBERON:0002405!3.37e-26!115;UBERON:0004765!1.06e-25!101;UBERON:0001434!1.06e-25!101;UBERON:0001049!4.14e-14!57;UBERON:0005068!4.14e-14!57;UBERON:0006241!4.14e-14!57;UBERON:0007135!4.14e-14!57;UBERON:0003081!2.11e-12!216;UBERON:0002616!1.35e-10!59;UBERON:0002780!3.35e-10!41;UBERON:0001890!3.35e-10!41;UBERON:0006240!3.35e-10!41;UBERON:0003080!9.23e-10!42;UBERON:0002204!2.10e-09!167;UBERON:0000178!5.05e-09!15;UBERON:0000179!5.05e-09!15;UBERON:0000463!5.05e-09!15;UBERON:0001893!5.59e-09!34;UBERON:0002020!5.85e-09!34;UBERON:0003528!5.85e-09!34;UBERON:0002791!1.33e-08!33;UBERON:0003075!5.87e-08!86;UBERON:0007284!5.87e-08!86;UBERON:0000955!6.62e-08!69;UBERON:0006238!6.62e-08!69;UBERON:0001869!6.82e-08!32;UBERON:0001017!9.37e-08!82;UBERON:0005743!2.40e-07!86;UBERON:0002346!4.17e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.03e-12;15!UBERON:0000179;7.03e-12;15!UBERON:0000463;7.03e-12;15!UBERON:0002390;5.60e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.16e-64,98;UBERON:0003061,2.16e-64,98;UBERON:0002193,1.06e-57,108;UBERON:0002371,1.29e-51,76;UBERON:0001474,2.62e-46,82;UBERON:0002405,4.68e-46,93;UBERON:0004765,2.38e-40,90;UBERON:0001434,1.43e-35,100;UBERON:0003081,4.38e-21,203;UBERON:0007023,2.47e-14,114;UBERON:0002204,3.22e-14,167;UBERON:0000178,6.67e-12,15;UBERON:0000179,6.67e-12,15;UBERON:0000463,6.67e-12,15;UBERON:0001049,6.17e-09,56;UBERON:0005068,6.17e-09,56;UBERON:0006241,6.17e-09,56;UBERON:0007135,6.17e-09,56;UBERON:0002384,1.65e-08,371;UBERON:0000073,4.25e-08,53;UBERON:0002616,4.25e-08,53;UBERON:0000926,7.94e-07,315;UBERON:0004120,7.94e-07,315;UBERON:0006603,7.94e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.8625064247612,17.2723229143746,39.1684791989672,0,0,0,0,0,16.7352250420863,44.3196326825502,78.6134234082955,29.5134784173558,2.46307021663917,6.47787332037959,4.12120908214698,40.5661086194986,30.9858273824824,26.6842467306598,28.3563425024935,23.8477375052659,13.6270803193846,22.1523142088056,25.1037492398519,9.69577142543199,29.6481285433492,41.9565044329487,29.7938270507552,37.2719832294357,19.9221489542227,7.19115150224271,21.4258724659632,17.6510964891852,18.5407766481722,27.3776579154974,30.5179396161097,20.4587880255693,16.5419266018293,6.24123747160254,10.5879782329248,32.4110778181199,30.2460092683717,15.2032191293582,9.6863920421339,14.362827803515,5.69632297393592,23.8718473532494,25.2999116958402,11.1119082119439,43.2465229914006,44.6025371739274,91.6135844173357,18.8108410869224,24.6656679726872,17.9010870689341,0,0,0,0.853460445133014,0,0,0,0,0,1.76171156811282,0,11.8954195721123,7.8471198817415,11.8522838148785,0.590129310341499,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.657751618414705,1.38175008892924,0,0,0,0,0,0,0,0.253019692019503,0,0,0,1.50575119077773,2.17577238962511,0,0.710331756132051,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263504357079378,1.24430121722827,0,0,3.57002133020152,4.35324343248168,4.52057065764142,3.10037811596945,2.28797964312051,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,7.75560528296651,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44703808522356,15.6782857643289,14.4172227420066,0,0,0,0,0,0,0.492663237895943,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51366464488333,6.52934218861764,18.9750545534728,0,0,0,0,0,0,0.224170287987055,2.56139988262505,0.215627574859517,1.54011643535698,0,0,0,0,0,56.9245338199859,38.8909896965232,36.8829806958072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.943796414768,22.0028484834989,22.8396973699371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.847294206991012,0,0,0,0,25.8798280708406,17.5866557642746,21.6465931126182,10.9586616710583,16.865853196534,27.2358790700941,17.8210374288578,17.4487538784739,0,0,0,0,0,0,0,10.5777066859393,10.7243007274125,22.4373997687316,8.11554850686389,17.6902222211479,17.3458356065226,25.0687833236837,87.7220669815235,10.665382001501,0.481764225311099,8.87918711640609,41.3070850559617,75.5711758462682,6.14481528616916,2.68411329470899,3.8375302593739,30.0897666919142,0,0,0,25.3134695678343,2.81974010175699,0,1.90460633053462,0,0,0,0,0.296964680832639,0,0.994147647766298,2.53204949538923,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,2.04628948090749,0,14.3689855408164,0,0,1.02044907978036,0,0,0,0,0,0,0,0,0,0,1.77148277162768,1.08536794762867,1.52581736317083,0.884634079449797,0.295547618953547,0.87754158861589,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0,0,2.04386596391473,5.49430897382587,0,0,0,0,0,0.476809736941136,0,0,0,0,0,0.619202951523374,0,0,0,0,4.65067817566672,0,1.1713222286267,0,0,0,0.394584402849391,0,0,1.5796644907122,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.823040347426423,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,4.65478288232776,35.7690446587523,0,0,0,0.458320848023367,0,0,0.429226048136571,0,1.67958681216816,0,0,0,0,0,0,0.0846733320657845,2.38568906942791,2.58786471611994,0,0,0,0,0,1.15424157650247,0,0.709251365692784,1.46872846777995,0,0,0,0,1.32418394073086,0,0,0,0,0,0.082092520749339,0,0,0.732761168390412,3.97520666736664,0.904980694530854,2.90911723833918,0,0,3.9511342650047,2.20086027139532,4.97086866416635,2.97699613087171,0,0,0,0,0,0,0,0,0,0.610131324509816,1.502291168478,1.72022758707021,4.10437490686353,4.09836259413131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62691028688288,0,0,0,0,0,0,0,12.1628571851321,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,1.22035527683273,1.41696576325585,3.03304332208587,0.615349092722265,0,0.96820153449905,2.09918339321406,1.42769420259154,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.810451015420736,0,2.06686796501184,1.01465296310251,0,0.548257766857182,0,0,0,0.535701835878287,1.3451348888753,0,0.682986574053893,0.887023701626388,0,0,2.51488012014277,1.38122824481983,0,0,0.706437835654626,0.314231179832004,0,0.913158720509496,0,0,0.428859265059938,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0.926089897295336,0.655678681511872,0,0.245148321753905,0,1.76677620403451,11.287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| ||
|short_description=p2@PRAM1 | |||
}} | }} |
Latest revision as of 00:53, 25 September 2015
Short description: | p2@PRAM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRAM1_5end |
Coexpression cluster: | C3836_CD14_Neutrophils_acute_Basophils_granulocyte_Peripheral_CD14CD16 |
Association with transcript: | 1bp_to_ENST00000255612, uc002mkc.2, uc002mkd.2_5end |
EntrezGene: | PRAM1 |
HGNC: | 30091 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.91e-73 | 108 |
common myeloid progenitor | 1.91e-73 | 108 |
myeloid leukocyte | 8.93e-71 | 72 |
monopoietic cell | 8.74e-67 | 59 |
monocyte | 8.74e-67 | 59 |
monoblast | 8.74e-67 | 59 |
promonocyte | 8.74e-67 | 59 |
macrophage dendritic cell progenitor | 6.28e-64 | 61 |
defensive cell | 2.05e-60 | 48 |
phagocyte | 2.05e-60 | 48 |
granulocyte monocyte progenitor cell | 5.86e-59 | 67 |
myeloid lineage restricted progenitor cell | 1.52e-57 | 66 |
classical monocyte | 7.38e-54 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.38e-54 | 42 |
hematopoietic stem cell | 3.54e-51 | 168 |
hematopoietic oligopotent progenitor cell | 4.34e-47 | 161 |
hematopoietic multipotent progenitor cell | 4.34e-47 | 161 |
hematopoietic cell | 5.19e-47 | 177 |
leukocyte | 1.34e-38 | 136 |
nongranular leukocyte | 1.65e-35 | 115 |
hematopoietic lineage restricted progenitor cell | 6.50e-29 | 120 |
intermediate monocyte | 6.83e-13 | 9 |
CD14-positive, CD16-positive monocyte | 6.83e-13 | 9 |
granulocyte | 1.17e-11 | 8 |
mesenchymal cell | 1.24e-09 | 354 |
connective tissue cell | 5.43e-09 | 361 |
blood cell | 6.60e-08 | 11 |
macrophage | 9.04e-08 | 6 |
motile cell | 8.19e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.16e-64 | 98 |
blood island | 2.16e-64 | 98 |
hemolymphoid system | 1.06e-57 | 108 |
bone marrow | 1.29e-51 | 76 |
bone element | 2.62e-46 | 82 |
immune system | 4.68e-46 | 93 |
skeletal element | 2.38e-40 | 90 |
skeletal system | 1.43e-35 | 100 |
lateral plate mesoderm | 4.38e-21 | 203 |
adult organism | 2.47e-14 | 114 |
musculoskeletal system | 3.22e-14 | 167 |
blood | 6.67e-12 | 15 |
haemolymphatic fluid | 6.67e-12 | 15 |
organism substance | 6.67e-12 | 15 |
neural tube | 6.17e-09 | 56 |
neural rod | 6.17e-09 | 56 |
future spinal cord | 6.17e-09 | 56 |
neural keel | 6.17e-09 | 56 |
connective tissue | 1.65e-08 | 371 |
regional part of nervous system | 4.25e-08 | 53 |
regional part of brain | 4.25e-08 | 53 |
mesoderm | 7.94e-07 | 315 |
mesoderm-derived structure | 7.94e-07 | 315 |
presumptive mesoderm | 7.94e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.15e-12 | 31 |
leukemia | 8.00e-10 | 39 |