FFCP PHASE1:Hg19::chr19:5850872..5850893,-: Difference between revisions
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|id=chr19:5850872..5850893,-
|short_description=p@chr19:5850872..5850893,-
|description=CAGE_peak_at_chr19:5850872..5850893,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:5850872..5850893,- | |||
|coexpression_cluster_id=C649 | |||
|description=CAGE_peak_at_chr19:5850872..5850893,- | |||
|id=chr19:5850872..5850893,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!1.08e-15!2;DOID:3111!2.29e-08!1;DOID:3603!2.29e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002372!5.59e-09!1;UBERON:0001961!5.59e-09!1;UBERON:0001744!5.59e-09!1;UBERON:0001735!5.59e-09!1;UBERON:0000989!9.46e-09!1;UBERON:0008811!9.46e-09!1;UBERON:0006258!9.46e-09!1;UBERON:0005876!9.46e-09!1;UBERON:0004874!9.46e-09!1;UBERON:0007023!3.44e-08!115;UBERON:0002363!4.07e-08!1;UBERON:0007647!4.07e-08!1;UBERON:0010115!4.07e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;5.42e-195;1!UBERON:0001961;5.42e-195;1!UBERON:0001744;5.42e-195;1!UBERON:0001042;5.42e-195;1!UBERON:0001735;5.42e-195;1!UBERON:0006562;1.55e-98;2!UBERON:0002465;3.81e-21;10!UBERON:0000161;6.95e-12;19!UBERON:0000166;6.95e-12;19!UBERON:0000344;2.29e-11;20!UBERON:0002405;8.32e-09;27!UBERON:0000165;1.52e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,5.42e-195,1;UBERON:0001961,5.42e-195,1;UBERON:0001744,5.42e-195,1;UBERON:0001735,5.42e-195,1;UBERON:0002465,3.81e-21,10;UBERON:0001042,3.81e-21,10;UBERON:0009145,3.81e-21,10;UBERON:0006562,2.25e-19,11;UBERON:0001557,6.95e-12,19;UBERON:0000344,2.29e-11,20;UBERON:0000166,1.80e-10,22;UBERON:0000165,2.67e-08,29;UBERON:0000930,2.67e-08,29;UBERON:0000161,5.81e-07,36 | |||
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|short_description=p@chr19:5850872..5850893,- | |||
}} | }} |
Latest revision as of 17:52, 27 July 2015
Short description: | p@chr19:5850872..5850893, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:5850872..5850893, - |
Coexpression cluster: | C649_tonsil_esophagus_tongue_throat_trachea_cervical_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 5.42e-195 | 1 |
mucosa-associated lymphoid tissue | 5.42e-195 | 1 |
lymphoid tissue | 5.42e-195 | 1 |
tonsillar ring | 5.42e-195 | 1 |
lymphoid system | 3.81e-21 | 10 |
chordate pharynx | 3.81e-21 | 10 |
pharyngeal region of foregut | 3.81e-21 | 10 |
pharynx | 2.25e-19 | 11 |
upper respiratory tract | 6.95e-12 | 19 |
mucosa | 2.29e-11 | 20 |
oral opening | 1.80e-10 | 22 |
mouth | 2.67e-08 | 29 |
stomodeum | 2.67e-08 | 29 |
orifice | 5.81e-07 | 36 |