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{{f5samples
{{f5samples
|DRA_sample_Accession=chicken_CAGE@SAMD00053745
|DRA_sample_Accession_Zoo=chicken_sRNA@SAMD00053745
|accession_numbers=chicken_CAGE;DRX057267;DRR063026;DRZ007521;DRZ00755375;DRZ014422!chicken_sRNA;DRX163585;DRR172974;DRZ014421!chicken_sRNA;DRX163586;DRR172975;DRZ014422
|accession_numbers_Zoo=chicken_sRNA;DRX163585;DRR172974;DRZ014421!chicken_sRNA;DRX163586;DRR172975;DRZ014422
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000101,FF:0000032,FF:0000001,FF:0000004,FF:0000649
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|def=
|def=
|expression_enrichment_score=chr10:80555320..80555378,-!p1@Creb3l3!1.85!80.33!Creb3l3;;chr1:173144144..173144176,+!p1@Nr1i3!1.75!54.91!Nr1i3;;chr4:107356135..107356179,-!p1@Dmrtb1!1.70!48.73!Dmrtb1;;chr13:93346120..93346155,-!p1@Spz1!1.66!45.22!Spz1;;chr10:88969376..88969395,-!p1@Nr1h4!1.64!42.98!Nr1h4;;chr1:168168856..168168893,-!p1@Mael!1.64!42.70!Mael;;chr13:83643159..83643226,+!p3@Mef2c!1.56!35.39!Mef2c;;chr9:74709695..74709722,+!p1@Onecut1!1.51!31.60!Onecut1;;chr2:163372884..163372904,+!p1@Hnf4a!1.51!31.04!Hnf4a;;chr3:3634145..3634161,+!p1@Hnf4g!1.49!29.63!Hnf4g;;chr2:120365588..120365602,-!p2@Zfp106!1.46!45.78!Zfp106;;chr6:131338278..131338362,-!p2@Csda!1.44!76.68!Csda;;chr1:173144100..173144138,+!p2@Nr1i3!1.44!26.54!Nr1i3;;chr5:38611867..38611888,+!p2@Lyar!1.44!26.26!Lyar;;chr7:119885539..119885574,+!p3@Tead1!1.43!25.70!Tead1;;chr5:144951153..144951203,+!p1@Bhlha15!1.42!36.52!Bhlha15;;chr4:133109285..133109308,+!p1@Nr0b2!1.42!25.14!Nr0b2;;chr5:135582751..135582788,+!p1@Mlxipl!1.38!89.60!Mlxipl;;chr16:38294860..38294924,-!p1@Nr1i2!1.37!22.61!Nr1i2;;chr7:19608891..19608895,-!p1@Foxa3!1.36!28.37!Foxa3;;chr4:87452180..87452196,-!p3@Mllt3!1.33!39.89!Mllt3;;chr10:106931775..106931798,-!p1@Myf6!1.32!19.66!Myf6;;chr12:74147689..74147711,-!p1@Six1!1.30!40.73!Six1;;chr4:87452200..87452229,-!p2@Mllt3!1.30!40.31!Mllt3;;chr11:100683839..100683890,-!p2@Stat5b!1.29!42.41!Stat5b;;chr11:69749396..69749433,+!p1@Ybx2!1.29!18.54!Ybx2;;chr3:99057269..99057306,+!p1@Tbx15!1.28!22.05!Tbx15;;chr3:90046414..90046476,-!p1@Creb3l4!1.26!16.99!Creb3l4;;chr2:103143336..103143367,-!p1@Ehf!1.25!27.11!Ehf;;chr2:27531961..27531974,+!p7@Rxra!1.23!16.15!Rxra;;chr15:85566537..85566552,+!p2@Ppara!1.22!15.45!Ppara;;chr1:169548377..169548430,+!p1@Rxrg!1.19!14.61!Rxrg;;chr8:87425854..87425891,+!p1@Klf1!1.17!13.76!Klf1;;chr11:98636531..98636559,-!p1@Nr1d1!1.13!70.92!Nr1d1;;chr15:85566184..85566238,+!p1@Ppara!1.13!18.54!Ppara;;chr5:20361092..20361119,-!p4@Phtf2!1.12!12.08!Phtf2;;chr7:51787434..51787448,-!p1@Spib!1.09!16.29!Spib;;chr11:52096066..52096081,-!p2@Tcf7!1.09!13.76!Tcf7;;chr11:90249521..90249551,-!p3@Hlf!1.09!11.38!Hlf;;chr10:88996336..88996380,-!p2@Nr1h4!1.07!13.20!Nr1h4;;chr2:77357622..77357704,-!p1@Zfp385b!1.06!28.51!Zfp385b;;chr9:51021788..51021802,+!p1@Pou2af1!1.06!12.64!Pou2af1;;chr7:35904304..35904320,+!p1@Cebpa!1.05!208.28!Cebpa;;chr7:52960700..52960719,+!p2@Dbp!1.05!12.64!Dbp;;chr15:103085660..103085681,-!p1@Nfe2!1.04!15.17!Nfe2;;chr10:88996295..88996335,-!p3@Nr1h4!1.04!11.80!Nr1h4;;chr17:27865882..27865901,-!p1@Spdef!1.04!9.97!Spdef;;chr6:90415250..90415271,+!p4@Klf15!1.03!9.69!Klf15;;chr7:52960555..52960662,+!p1@Dbp!1.02!82.02!Dbp;;chr3:99057677..99057730,+!p2@Tbx15!1.02!9.41!Tbx15;;chr5:148118639..148118715,-!p1@Cdx2!1.01!9.27!Cdx2;;chr5:115421065..115421088,-!p1@Hnf1a!1.01!9.13!Hnf1a;;chr16:91270004..91270023,+!p1@Olig1!1.00!10.25!Olig1;;chr5:77543897..77543911,-!p2@Hopx!0.99!16.99!Hopx;;chr13:83643136..83643158,+!p7@Mef2c!0.97!8.43!Mef2c;;chr13:83643232..83643254,+!p5@Mef2c!0.97!8.29!Mef2c;;chr12:57796615..57796687,+!p1@Pax9!0.96!8.15!Pax9;;chr10:88145766..88145770,-!p1@Spic!0.95!10.53!Spic;;chr10:22451680..22451722,-!p3@Tbpl1!0.95!8.01!Tbpl1;;chr1:137155026..137155042,-!p1@Elf3!0.94!46.77!Elf3;;chr15:97738692..97738747,-!p1@Vdr!0.94!43.26!Vdr;;chr16:43363190..43363242,+!p2@Zbtb20!0.94!24.72!Zbtb20;;chr5:24108047..24108106,-!p3@Smarcd3!0.94!14.04!Smarcd3;;chr1:38721792..38721845,-!p1@Aff3!0.94!9.69!Aff3;;chr4:107356181..107356197,-!p2@Dmrtb1!0.94!7.72!Dmrtb1;;chr2:103264213..103264233,+!p1@Elf5!0.93!7.44!Elf5;;chr10:70701022..70701036,-!p3@Tfam!0.93!7.44!Tfam;;chr17:14011485..14011507,+!p2@Mllt4!0.93!7.44!Mllt4;;chr19:37509324..37509337,+!p1@Hhex!0.90!51.68!Hhex;;chr1:120524520..120524528,+!p1@Tfcp2l1!0.88!19.80!Tfcp2l1;;chr18:64499674..64499696,+!p1@Onecut2!0.88!11.80!Onecut2;;chr2:91035254..91035271,-!p3@Nr1h3!0.88!8.43!Nr1h3;;chr18:52775562..52775650,+!p1@Zfp474!0.88!6.60!Zfp474;;chr2:28477452..28477483,-!p1@Gfi1b!0.86!7.86!Gfi1b;;chr1:52065054..52065098,+!p4@Stat4!0.86!6.32!Stat4;;chr1:52043967..52043976,+!p5@Stat4!0.86!6.32!Stat4;;chr2:79296783..79296801,-!p1@Neurod1!0.86!6.18!Neurod1;;chr12:58646974..58647003,-!p1@Foxa1!0.85!8.29!Foxa1;;chr15:75578748..75578752,-!p1@Mafa!0.85!6.04!Mafa;;chr2:91035197..91035237,-!p1@Nr1h3!0.84!12.92!Nr1h3;;chr2:103264245..103264268,+!p2@Elf5!0.84!5.90!Elf5;;chr6:115372058..115372085,+!p3@Pparg!0.84!5.90!Pparg;;chr7:52071956..52071978,-!p1@Atf5!0.83!199.85!Atf5;;chr11:121380640..121380655,-!p1@Zfp750!0.83!9.83!Zfp750;;chr13:72766250..72766273,+!p1@Irx2!0.83!9.13!Irx2;;chr4:149610794..149610876,+!p2@LOC100045967,p2@LOC100503183,p3@Eno1,p3@Gm5506!0.83!8.01!Eno1;;chr11:98636508..98636524,-!p3@Nr1d1!0.83!7.30!Nr1d1;;chr11:83664365..83664383,+!p1@Hnf1b!0.83!5.76!Hnf1b;;chr7:122989594..122989626,-!p1@Sox6!0.83!5.76!Sox6;;chr6:90412582..90412601,+!p1@Klf15!0.81!27.81!Klf15;;chr7:122989632..122989668,-!p2@Sox6!0.81!5.48!Sox6;;chr18:50438025..50438057,+!p1@Fam170a!0.81!5.48!Fam170a;;chr10:5636354..5636373,-!p2@Esr1!0.81!5.48!Esr1;;chr2:74542918..74542971,+!p1@Hoxd8!0.80!8.29!Hoxd8;;chr7:52960730..52960762,+!p3@Dbp!0.80!6.88!Dbp;;chr15:103164702..103164778,-!p3@Zfp385a!0.80!6.46!Zfp385a;;chr12:39507680..39507715,+!p2@Etv1!0.79!10.67!Etv1;;chr10:5636374..5636421,-!p1@Esr1!0.79!6.60!Esr1;;chr13:55932591..55932622,-!p1@Pitx1!0.79!6.32!Pitx1;;chr4:44723559..44723593,-!p1@Pax5!0.79!5.20!Pax5;;chr10:22539932..22539956,-!p1@Tcf21!0.78!14.33!Tcf21;;chr9:96159147..96159204,+!p2@Tfdp2!0.78!9.97!Tfdp2;;chr18:64499706..64499721,+!p2@Onecut2!0.78!7.30!Onecut2;;chr16:50331100..50331130,-!p3@Bbx!0.78!5.06!Bbx;;chrX:7544943..7545001,-!p1@Gata1!0.78!5.06!Gata1;;chr6:143895612..143895631,-!p3@Sox5!0.78!5.06!Sox5;;chr7:53631837..53631850,+!p1@Myod1!0.78!5.06!Myod1;;chr9:63514630..63514652,-!p8@Smad3!0.78!5.06!Smad3;;chr11:96690797..96690813,-!p1@Nfe2l1!0.77!102.10!Nfe2l1;;chr3:94176733..94176794,+!p1@Rorc!0.77!41.71!Rorc;;chr11:16908650..16908690,-!p1@Plek!0.77!32.86!Plek;;chr9:31720843..31720888,-!p1@Barx2!0.77!5.48!Barx2;;chr9:74714303..74714318,+!p2@Onecut1!0.77!4.92!Onecut1;;chr11:34108085..34108092,-!p1@Foxi1!0.77!4.92!Foxi1;;chr16:25684232..25684285,+!p2@Trp63!0.77!4.92!Trp63;;chr18:3309876..3309914,-!p9@Crem!0.76!4.78!Crem;;chr6:143895581..143895604,-!p6@Sox5!0.76!4.78!Sox5;;chr1:193041811..193041838,-!p2@Atf3!0.76!4.78!Atf3;;chr11:60023912..60023930,-!p1@Srebf1!0.75!125.84!Srebf1;;chr2:160192793..160192809,-!p1@Mafb!0.75!76.68!Mafb;;chr2:180377386..180377462,-!p1@Tcfl5!0.75!5.76!Tcfl5;;chr2:163332558..163332596,+!p2@Hnf4a!0.75!4.63!Hnf4a;;chr14:19071466..19071550,-!p1@Nr1d2!0.74!34.13!Nr1d2;;chr13:30841099..30841116,+!p1@Irf4!0.74!7.44!Irf4;;chr11:98407264..98407295,-!p1@Ikzf3!0.74!4.49!Ikzf3;;chr1:168168817..168168850,-!p2@Mael!0.74!4.49!Mael;;chr6:86619104..86619119,-!p1@Mxd1!0.73!39.32!Mxd1;;chr5:138199361..138199441,+!p2@Tsc22d4!0.73!8.85!Tsc22d4;;chr11:60036258..60036276,-!p3@Srebf1!0.73!8.15!Srebf1;;chr9:63514609..63514620,-!p10@Smad3!0.73!4.35!Smad3;;chr5:120121169..120121171,+!p4@Tbx3!0.72!8.01!Tbx3;;chr15:81633203..81633215,+!p3@Tef!0.72!7.02!Tef;;chr10:84224957..84224991,+!p3@Rfx4!0.72!4.21!Rfx4;;chr11:11586218..11586285,+!p1@Ikzf1!0.71!14.61!Ikzf1;;chr13:72101178..72101203,-!p1@Irx1!0.71!6.74!Irx1;;chr17:51971960..51971979,-!p1@Satb1!0.71!5.76!Satb1;;chr15:85566241..85566253,+!p6@Ppara!0.71!4.07!Ppara;;chr10:106931803..106931817,-!p2@Myf6!0.71!4.07!Myf6;;chr1:42752574..42752621,+!p@chr1:42752574..42752621,+!0.70!5.20!Pou3f3;;chr14:63864056..63864102,-!p1@Gata4!0.69!7.30!Gata4;;chr5:24107903..24107917,-!p6@Smarcd3!0.69!5.06!Smarcd3;;chr6:52190467..52190500,-!p1@Hoxa10!0.69!3.93!Hoxa10;;chr2:103143315..103143328,-!p2@Ehf!0.69!3.93!Ehf;;chr4:87452167..87452178,-!p8@Mllt3!0.69!3.93!Mllt3;;chr15:81633165..81633188,+!p2@Tef!0.68!35.53!Tef;;chr18:3299535..3299565,-!p10@Crem!0.68!3.79!Crem;;chr2:163372869..163372882,+!p3@Hnf4a!0.68!3.79!Hnf4a;;chr2:24331085..24331100,-!p1@Pax8!0.68!3.79!Pax8;;chr11:69749437..69749467,+!p3@Ybx2!0.68!3.79!Ybx2;;chr7:52960663..52960677,+!p6@Dbp!0.68!3.79!Dbp;;chr6:108610766..108610781,+!p2@Bhlhe40!0.67!7.16!Bhlhe40;;chr17:86087592..86087615,-!p1@Six2!0.67!3.65!Six2;;chr10:70698065..70698087,-!p4@Tfam!0.67!3.65!Tfam;;chr11:98407234..98407259,-!p2@Ikzf3!0.67!3.65!Ikzf3;;chr10:80555285..80555291,-!p4@Creb3l3!0.67!3.65!Creb3l3;;chr2:180069370..180069409,-!p1@Gata5!0.66!4.35!Gata5;;chr9:69137716..69137744,+!p1@Rora!0.65!25.14!Rora;;chr11:96143666..96143725,+!p1@Hoxb8!0.65!4.07!Hoxb8;;chr2:164228702..164228719,+!p1@Rbpjl!0.65!3.51!Rbpjl;;chr6:52663997..52664043,+!p2@Tax1bp1!0.65!3.51!Tax1bp1;;chr6:90415281..90415295,+!p5@Klf15!0.65!3.51!Klf15;;chr4:114729957..114730012,+!p3@Tal1!0.65!3.51!Tal1;;chr13:31650185..31650201,+!p1@Foxq1!0.64!13.34!Foxq1;;chr5:24107993..24108036,-!p2@Smarcd3!0.64!8.99!Smarcd3;;chr6:90412608..90412630,+!p2@Klf15!0.64!7.72!Klf15;;chr13:72101161..72101177,-!p2@Irx1!0.64!4.92!Irx1;;chr17:87153505..87153516,+!p6@Epas1!0.64!4.92!Epas1;;chr6:52176164..52176195,-!p1@Hoxa9!0.64!4.35!Hoxa9;;chr16:50331135..50331178,-!p5@Bbx!0.64!3.37!Bbx;;chr1:56694305..56694324,-!p1@Hsfy2!0.64!3.37!Hsfy2;;chr14:69808725..69808748,+!p1@Nkx3-1!0.64!3.37!Nkx3-1;;chr8:59799772..59799789,+!p1@Hand2!0.63!10.67!Hand2;;chr17:51971932..51971958,-!p2@Satb1!0.63!4.78!Satb1;;chr17:44951553..44951586,-!p2@Runx2!0.63!3.65!Runx2;;chr16:25801993..25802014,+!p1@Trp63!0.63!3.23!Trp63;;chr12:100009228..100009251,+!p2@Zc3h14!0.63!3.23!Zc3h14;;chr10:22451724..22451752,-!p4@Tbpl1!0.63!3.23!Tbpl1;;chr5:38611831..38611842,+!p3@Lyar!0.63!3.23!Lyar;;chr14:55489750..55489784,-!p2@Homez!0.63!3.23!Homez;;chr1:138857076..138857105,-!p1@Nr5a2!0.63!3.23!Nr5a2;;chr2:147872790..147872821,-!p2@Foxa2!0.63!3.23!Foxa2;;chr19:23215673..23215753,+!p1@Klf9!0.62!55.34!Klf9;;chr15:103085690..103085710,-!p3@Nfe2!0.62!3.51!Nfe2;;chr6:131338435..131338482,-!p1@Csda!0.61!356.31!Csda;;chr6:145814003..145814056,-!p1@Bhlhe41!0.61!10.11!Bhlhe41;;chr2:27532479..27532509,+!p3@Rxra!0.61!7.02!Rxra;;chr1:138857048..138857071,-!p2@Nr5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Sp7!0.47!1.97!Sp7;;chr12:57792498..57792515,+!p2@Pax9!0.47!1.97!Pax9;;chr15:85565338..85565355,+!p7@Ppara!0.47!1.97!Ppara;;chr18:61195843..61195864,-!p2@Cdx1!0.47!1.97!Cdx1;;chr2:74543397..74543435,+!p2@Hoxd8!0.47!1.97!Hoxd8;;chr6:115372099..115372121,+!p5@Pparg!0.47!1.97!Pparg;;chr11:52095821..52095836,-!p3@Tcf7!0.47!1.97!Tcf7;;chr11:116196698..116196713,-!p3@Foxj1!0.47!1.97!Foxj1;;chr10:5734677..5734702,-!p4@Esr1!0.47!1.97!Esr1;;chr15:101097270..101097290,+!p1@Nr4a1!0.46!26.26!Nr4a1;;chr8:118231678..118231692,-!p2@Maf!0.46!23.45!Maf;;chr3:95032558..95032641,-!p2@Mllt11!0.46!14.04!Mllt11;;chr11:98636575..98636607,-!p2@Nr1d1!0.46!8.99!Nr1d1;;chr8:94881733..94881790,+!p1@Irx5!0.46!4.49!Irx5;;chr12:37835203..37835218,+!p3@Meox2!0.46!2.39!Meox2;;chr2:133377954..133377973,+!p1@Bmp2!0.45!7.58!Bmp2;;chr8:125778192..125778217,+!p2@Zfp276!0.45!6.60!Zfp276;;chr16:44173384..44173407,+!p2@Gm608!0.45!6.04!Gm608;;chr15:78994907..78994926,-!p1@Sox10!0.45!5.90!Sox10;;chr8:94325321..94325366,-!p1@Irx3!0.45!5.62!Irx3;;chr6:72849280..72849297,-!p6@Kcmf1!0.45!4.35!Kcmf1;;chr1:57029281..57029326,-!p1@Satb2!0.45!3.23!Satb2;;chr11:11585912..11585950,+!p6@Ikzf1!0.45!2.53!Ikzf1;;chr11:87430678..87430702,+!p1@Hsf5!0.45!1.83!Hsf5;;chr6:38097380..38097407,-!p6@D630045J12Rik!0.45!1.83!D630045J12Rik;;chr3:3508024..3508069,+!p2@Hnf4g!0.45!1.83!Hnf4g;;chr2:180377307..180377330,-!p2@Tcfl5!0.45!1.83!Tcfl5;;chr1:19199236..19199258,+!p1@Tfap2b!0.45!1.83!Tfap2b;;chr15:85602655..85602680,+!p5@Ppara!0.45!1.83!Ppara;;chr15:81641878..81641921,+!p1@Tef!0.44!64.60!Tef;;chr17:87153028..87153049,+!p2@Epas1!0.44!51.12!Epas1;;chr1:191994550..191994623,-!p1@Prox1!0.44!16.85!Prox1;;chr14:18493386..18493464,+!p1@Thrb!0.44!8.99!Thrb;;chr19:55816546..55816556,+!p3@Tcf7l2!0.44!8.85!Tcf7l2;;chr2:160698288..160698358,-!p3@Zhx3!0.44!7.16!Zhx3;;chr10:20880629..20880683,-!p1@Myb!0.44!6.60!Myb;;chr15:35225845..35225867,+!p1@Osr2!0.44!5.62!Osr2;;chr6:90412556..90412581,+!p3@Klf15!0.44!4.78!Klf15;;chr15:81633139..81633152,+!p4@Tef!0.44!3.51!Tef;;chr19:25746898..25746910,+!p1@Dmrt2!0.44!2.95!Dmrt2;;chr16:18587076..18587106,-!p1@Tbx1!0.44!2.81!Tbx1;;chr1:138845748..138845766,-!p4@Nr5a2!0.44!2.53!Nr5a2;;chr5:125538703..125538715,-!p5@Ncor2!0.44!2.25!Ncor2;;chr11:98636568..98636574,-!p9@Nr1d1!0.44!2.25!Nr1d1;;chr11:98636373..98636387,-!p5@Nr1d1!0.44!2.11!Nr1d1;;chr8:107793737..107793757,+!p2@Hsf4!0.44!2.11!Hsf4;;chrX:98449492..98449510,+!p1@Foxo4!0.43!25.00!Foxo4;;chr8:87225329..87225396,+!p1@Lyl1!0.43!8.57!Lyl1;;chr10:20880698..20880717,-!p3@Myb!0.43!3.09!Myb;;chr7:52963269..52963305,+!p4@Dbp!0.43!2.67!Dbp;;chr8:47825203..47825225,+!p3@Irf2!0.43!2.53!Irf2;;chr6:6831950..6831985,-!p2@Dlx5!0.43!1.97!Dlx5;;chr6:52664044..52664072,+!p5@Tax1bp1!0.43!1.69!Tax1bp1;;chr6:55631042..55631102,-!p1@Neurod6!0.43!1.69!Neurod6;;chr2:19367259..19367278,+!p1@Ptf1a!0.43!1.69!Ptf1a;;chr1:122498955..122498968,+!p1@En1!0.43!1.69!En1;;chr18:61195865..61195880,-!p1@Cdx1!0.43!1.69!Cdx1;;chr13:55937432..55937460,-!p4@Pitx1!0.43!1.69!Pitx1;;chr14:32979060..32979091,+!p4@Gm6768,p4@Ncoa4!0.43!1.69!Ncoa4;;chr15:102196745..102196769,-!p2@Sp7!0.43!1.69!Sp7;;chr13:55937467..55937516,-!p3@Pitx1!0.43!1.69!Pitx1;;chr7:86937900..86937933,-!p@chr7:86937900..86937933,-!0.43!1.69!Mesp1;;chr2:120389531..120389614,-!p1@Zfp106!0.42!178.22!Zfp106;;chr6:83299445..83299490,+!p1@Bola3!0.42!99.29!Bola3;;chr18:3281034..3281104,-!p1@Crem!0.42!16.43!Crem;;chr8:123260252..123260264,+!p1@Irf8!0.42!16.15!Irf8;;chr9:48644037..48644067,-!p2@Zbtb16!0.42!5.34!Zbtb16;;chr6:88143711..88143717,+!p2@Gata2!0.42!3.09!Gata2;;chr6:108610513..108610528,+!p3@Bhlhe40!0.42!2.95!Bhlhe40;;chr9:30838314..30838336,+!p4@Zbtb44!0.42!2.11!Zbtb44;;chr17:47873985..47874056,+!p1@Tfeb!0.41!18.68!Tfeb;;chrX:137077716..137077734,-!p1@Tsc22d3!0.41!16.15!Tsc22d3;;chr16:23988686..23988693,-!p2@Bcl6!0.41!4.07!Bcl6;;chr11:69749320..69749345,+!p2@Ybx2!0.41!3.09!Ybx2;;chr4:135129538..135129558,-!p1@Grhl3!0.41!2.81!Grhl3;;chr2:27532513..27532525,+!p8@Rxra!0.41!1.97!Rxra;;chr1:136186574..136186592,+!p1@Myog!0.41!1.54!Myog;;chr4:61869708..61869732,-!p5@Zfp37!0.41!1.54!Zfp37;;chr7:116875222..116875229,-!p1@Ascl3!0.41!1.54!Ascl3;;chr5:77543935..77543947,-!p4@Hopx!0.41!1.54!Hopx;;chr6:52859625..52859638,-!p3@Jazf1!0.41!1.54!Jazf1;;chr8:26958093..26958148,-!p2@Ash2l!0.41!1.54!Ash2l;;chr7:25655066..25655080,+!p2@Dmrtc2!0.41!1.54!Dmrtc2;;chr9:18282826..18282845,+!p2@Mbd3l1!0.41!1.54!Mbd3l1;;chr9:63514596..63514603,-!p12@Smad3!0.41!1.54!Smad3;;chr9:74714281..74714296,+!p5@Onecut1!0.41!1.54!Onecut1;;chr11:69749347..69749356,+!p8@Ybx2!0.41!1.54!Ybx2;;chr10:22451660..22451678,-!p7@Tbpl1!0.41!1.54!Tbpl1;;chr14:69790035..69790050,+!p2@Nkx2-6!0.41!1.54!Nkx2-6;;chr14:69789996..69790021,+!p1@Nkx2-6!0.41!1.54!Nkx2-6;;chr12:87762578..87762612,+!p1@Esrrb!0.41!1.54!Esrrb;;chr17:15637108..15637147,+!p3@Tbp!0.41!1.54!Tbp;;chr17:87153240..87153254,+!p1@Epas1!0.40!44.24!Epas1;;chr5:20387850..20387869,-!p1@Phtf2!0.40!22.75!Phtf2;;chr9:96619823..96619898,-!p2@Zbtb38!0.40!9.41!Zbtb38;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tb2;;chr2:31495237..31495243,+!p1@Prdm12!0.19!0.56!Prdm12;;chr1:57028125..57028149,-!p2@Satb2!0.19!0.56!Satb2;;chr1:87497443..87497454,+!p3@Gm2427,p3@Sp140!0.19!0.56!Sp140;;chr2:180377022..180377040,-!p4@Tcfl5!0.19!0.56!Tcfl5;;chr2:104966933..104966966,+!p3@Wt1!0.19!0.56!Wt1;;chr2:163051181..163051205,+!p2@Tox2!0.19!0.56!Tox2;;chr2:27565794..27565801,+!p17@Rxra!0.19!0.56!Rxra;;chr11:98407142..98407159,-!p5@Ikzf3!0.19!0.56!Ikzf3;;chr11:85699862..85699920,+!p1@Tbx4!0.19!0.56!Tbx4;;chr11:95170996..95171026,-!p3@Myst2!0.19!0.56!Myst2;;chr11:96055650..96055665,+!p3@Hoxb13!0.19!0.56!Hoxb13;;chr10:84300848..84300879,+!p6@Rfx4!0.19!0.56!Rfx4;;chr11:69468531..69468557,+!p1@Sox15!0.19!0.56!Sox15;;chr12:113917774..113917792,+!p5@Zbtb42!0.19!0.56!Zbtb42;;chr11:98190955..98190968,-!p2@Neurod2!0.19!0.56!Neurod2;;chr10:20881210..20881226,-!p8@Myb!0.19!0.56!Myb;;chr11:69754088..69754101,+!p11@Ybx2!0.19!0.56!Ybx2;;chr11:83666422..83666446,+!p4@Hnf1b!0.19!0.56!Hnf1b;;chr11:90250999..90251013,-!p8@Hlf!0.19!0.56!Hlf;;chr10:84300905..84300919,+!p7@Rfx4!0.19!0.56!Rfx4;;chr10:5734907..5734920,-!p11@Esr1!0.19!0.56!Esr1;;chr11:98822047..98822072,+!p9@Rara!0.19!0.56!Rara;;chr5:107053413..107053423,-!p15@Zfp644!0.19!0.56!Zfp644;;chr5:148081686..148081715,+!p1@Pdx1!0.19!0.56!Pdx1;;chr5:148081722..148081744,+!p2@Pdx1!0.19!0.56!Pdx1;;chr5:148118792..148118806,-!p3@Cdx2!0.19!0.56!Cdx2;;chr6:52190840..52190853,-!p5@Hoxa10!0.19!0.56!Hoxa10;;chr6:52195763..52195792,-!p2@Hoxa11!0.19!0.56!Hoxa11;;chr7:135020644..135020659,+!p6@Zfp646!0.19!0.56!Zfp646;;chr5:136778371..136778381,-!p11@Cux1!0.19!0.56!Cux1;;chr6:83303212..83303243,+!p5@Bola3!0.19!0.56!Bola3;;chr6:85137505..85137517,+!p2@Emx1!0.19!0.56!Emx1;;chr15:102828642..102828653,+!p2@Hoxc6!0.19!0.56!Hoxc6;;chr13:112476407..112476418,+!p6@Mier3!0.19!0.56!Mier3;;chr12:30213247..30213333,+!p1@Myt1l!0.19!0.56!Myt1l;;chr15:102839912..102839938,+!p5@Hoxc6!0.19!0.56!Hoxc6;;chr15:102820946..102820961,+!p3@Hoxc8!0.19!0.56!Hoxc8;;chr13:48758276..48758291,+!p1@Barx1!0.19!0.56!Barx1;;chr12:74147842..74147856,-!p3@Six1!0.19!0.56!Six1;;chr12:74147860..74147888,-!p2@Six1!0.19!0.56!Six1;;chr12:75002389..75002406,+!p4@Hif1a!0.19!0.56!Hif1a;;chr15:103085821..103085828,-!p6@Nfe2!0.19!0.56!Nfe2;;chr12:77278238..77278252,-!p1@Esr2!0.19!0.56!Esr2;;chr14:69808759..69808769,+!p2@Nkx3-1!0.19!0.56!Nkx3-1;;chr15:102839976..102839989,+!p4@Hoxc6!0.19!0.56!Hoxc6;;chr12:81214217..81214219,-!p2@Zfp36l1!0.19!0.56!Zfp36l1;;chr14:63864337..63864381,-!p6@Gata4!0.19!0.56!Gata4;;chr19:25580226..25580261,+!p2@Dmrt1!0.19!0.56!Dmrt1;;chr16:43236037..43236050,+!p35@Zbtb20!0.19!0.56!Zbtb20;;chr17:28409136..28409150,+!p3@Ppard!0.19!0.56!Ppard;;chr16:43364258..43364270,+!p27@Zbtb20!0.19!0.56!Zbtb20;;chr17:51972603..51972624,-!p9@Satb1!0.19!0.56!Satb1;;chr17:51972530..51972571,-!p7@Satb1!0.19!0.56!Satb1;;chr18:36441165..36441172,+!p6@Pura!0.19!0.56!Pura;;chr17:51972400..51972428,-!p11@Satb1!0.19!0.56!Satb1;;chrX:7156792..7156811,+!p1@Foxp3!0.19!0.56!Foxp3;;chr7:134488857..134488914,-!p1@Zfp768!0.18!17.84!Zfp768;;chr8:124806017..124806040,+!p2@Zfpm1!0.18!14.18!Zfpm1;;chr19:10315179..10315241,-!p1@Gm98!0.18!13.48!Gm98;;chr15:81977802..81977828,+!p2@Srebf2!0.18!11.10!Srebf2;;chr7:31741761..31741800,-!p2@LOC100504922,p2@Usf2!0.18!7.72!Usf2;;chr13:99954640..99954681,+!p1@Zfp366!0.18!4.21!Zfp366;;chr18:39649534..39649569,-!p3@Nr3c1!0.18!3.65!Nr3c1;;
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 38: Line 42:
|is_a=FF:0000004;;FF:0000032;;FF:0000649;;UBERON:0000922
|is_a=FF:0000004;;FF:0000032;;FF:0000649;;UBERON:0000922
|is_obsolete=
|is_obsolete=
|name=Universal RNA - Chicken Day 10 Embryo RNA, donor1
|library_id=CNhs10485
|name=chicken embryo whole body, day10 (HH37)
|namespace=
|namespace=
|part_of=
|part_of=
Line 58: Line 63:
|rna_weight_ug=800
|rna_weight_ug=800
|sample_age=
|sample_age=
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_line=
Line 70: Line 76:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.05030023859617e-282!GO:0005737;cytoplasm;8.48111009365538e-189!GO:0044444;cytoplasmic part;6.96788228969975e-147!GO:0043227;membrane-bound organelle;5.48955158312082e-99!GO:0043231;intracellular membrane-bound organelle;5.48955158312082e-99!GO:0043226;organelle;2.37750604268466e-92!GO:0043229;intracellular organelle;4.14854752212074e-92!GO:0044422;organelle part;8.6322602934089e-71!GO:0044446;intracellular organelle part;1.59772886685533e-69!GO:0005515;protein binding;1.46935131740421e-68!GO:0005739;mitochondrion;6.10818656036047e-62!GO:0044237;cellular metabolic process;7.41622032822577e-59!GO:0044238;primary metabolic process;1.14817315095271e-54!GO:0031090;organelle membrane;9.61264912412914e-51!GO:0032991;macromolecular complex;3.70077153814542e-42!GO:0009058;biosynthetic process;3.91461185919483e-41!GO:0044429;mitochondrial part;1.34345399180002e-40!GO:0043233;organelle lumen;1.25129435235659e-39!GO:0031974;membrane-enclosed lumen;1.25129435235659e-39!GO:0030529;ribonucleoprotein complex;7.36382710369961e-39!GO:0019538;protein metabolic process;1.48211858943318e-37!GO:0005783;endoplasmic reticulum;9.44196045440293e-37!GO:0044249;cellular biosynthetic process;3.71869520119179e-35!GO:0044260;cellular macromolecule metabolic process;3.05149648782865e-33!GO:0005829;cytosol;4.43892666842633e-33!GO:0044267;cellular protein metabolic process;1.04779682892829e-31!GO:0003723;RNA binding;3.19746062207034e-31!GO:0031967;organelle envelope;5.15749582897859e-31!GO:0031975;envelope;1.01476989225712e-30!GO:0016491;oxidoreductase activity;1.35634055216374e-30!GO:0033036;macromolecule localization;2.57629688980041e-30!GO:0015031;protein transport;2.57661049788601e-29!GO:0006412;translation;8.21549248436219e-29!GO:0043170;macromolecule metabolic process;9.33836351368226e-29!GO:0045184;establishment of protein localization;1.04955390565996e-28!GO:0008104;protein localization;2.77352650995721e-28!GO:0044432;endoplasmic reticulum part;3.11021996140623e-27!GO:0009059;macromolecule biosynthetic process;9.06460098939299e-27!GO:0016043;cellular component organization and biogenesis;9.5059283262045e-27!GO:0006082;organic acid metabolic process;2.35156346355683e-26!GO:0005840;ribosome;3.28959666684209e-26!GO:0019752;carboxylic acid metabolic process;1.38916273837502e-25!GO:0005740;mitochondrial envelope;1.38916273837502e-25!GO:0031966;mitochondrial membrane;3.97103196005872e-25!GO:0019866;organelle inner membrane;2.89636241306523e-24!GO:0044428;nuclear part;3.85256619730302e-24!GO:0044248;cellular catabolic process;8.83995391944525e-24!GO:0005743;mitochondrial inner membrane;1.58476619436182e-23!GO:0012505;endomembrane system;2.29137389408133e-23!GO:0003735;structural constituent of ribosome;1.62180433816602e-22!GO:0005789;endoplasmic reticulum membrane;5.34770015990084e-22!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.61440003521857e-22!GO:0046907;intracellular transport;9.07504475141402e-22!GO:0044255;cellular lipid metabolic process;9.87915571881928e-22!GO:0006950;response to stress;1.7669960858115e-21!GO:0006629;lipid metabolic process;1.96598830841777e-21!GO:0043234;protein complex;4.18098108963771e-21!GO:0031980;mitochondrial lumen;8.92413692927842e-21!GO:0005759;mitochondrial matrix;8.92413692927842e-21!GO:0006886;intracellular protein transport;1.92968891661891e-20!GO:0033279;ribosomal subunit;2.17504446963481e-20!GO:0006091;generation of precursor metabolites and energy;2.95490799110758e-19!GO:0016071;mRNA metabolic process;8.73172985064258e-19!GO:0008380;RNA splicing;2.1426804877858e-18!GO:0009056;catabolic process;6.91010103059186e-18!GO:0006119;oxidative phosphorylation;2.11436426538457e-17!GO:0065003;macromolecular complex assembly;2.12632038454684e-17!GO:0009055;electron carrier activity;5.32978506747479e-17!GO:0048770;pigment granule;5.43161503822343e-17!GO:0042470;melanosome;5.43161503822343e-17!GO:0032787;monocarboxylic acid metabolic process;9.92390942493719e-17!GO:0008134;transcription factor binding;7.45526701397208e-16!GO:0006396;RNA processing;1.70520402091139e-15!GO:0022607;cellular component assembly;1.70520402091139e-15!GO:0006397;mRNA processing;2.36456676393689e-15!GO:0031981;nuclear lumen;3.46419603465979e-15!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.52871792924761e-15!GO:0051186;cofactor metabolic process;3.76565843150706e-15!GO:0016192;vesicle-mediated transport;4.25611580897456e-14!GO:0006457;protein folding;7.1930165548265e-14!GO:0051641;cellular localization;9.30530419148628e-14!GO:0051649;establishment of cellular localization;1.75071161543891e-13!GO:0044445;cytosolic part;2.28247395552078e-13!GO:0008219;cell death;2.38428635294063e-13!GO:0016265;death;2.38428635294063e-13!GO:0005681;spliceosome;3.48193410965269e-13!GO:0044265;cellular macromolecule catabolic process;4.49524984207713e-13!GO:0006915;apoptosis;7.18144710654988e-13!GO:0012501;programmed cell death;7.18144710654988e-13!GO:0044455;mitochondrial membrane part;1.3365288050155e-12!GO:0005746;mitochondrial respiratory chain;1.4538943925457e-12!GO:0048523;negative regulation of cellular process;1.94155645311926e-12!GO:0006118;electron transport;3.20208768807143e-12!GO:0002526;acute inflammatory response;3.29834316285721e-12!GO:0009611;response to wounding;4.66412784797384e-12!GO:0015935;small ribosomal subunit;5.08291744830376e-12!GO:0048519;negative regulation of biological process;5.44250101664117e-12!GO:0006732;coenzyme metabolic process;5.81651666245463e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.73878542829778e-12!GO:0005773;vacuole;7.15996464919945e-12!GO:0005794;Golgi apparatus;7.72964043827111e-12!GO:0048037;cofactor binding;9.3390804233833e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;1.03920942735909e-11!GO:0016874;ligase activity;1.76335712063148e-11!GO:0019941;modification-dependent protein catabolic process;2.07543301922307e-11!GO:0043632;modification-dependent macromolecule catabolic process;2.07543301922307e-11!GO:0006511;ubiquitin-dependent protein catabolic process;2.52677420391378e-11!GO:0008202;steroid metabolic process;2.55752479417259e-11!GO:0050136;NADH dehydrogenase (quinone) activity;2.56336985617386e-11!GO:0003954;NADH dehydrogenase activity;2.56336985617386e-11!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.56336985617386e-11!GO:0044257;cellular protein catabolic process;3.05889974990194e-11!GO:0006605;protein targeting;3.2666600938249e-11!GO:0006807;nitrogen compound metabolic process;4.01671818377585e-11!GO:0005792;microsome;4.0736657327084e-11!GO:0051082;unfolded protein binding;5.88124626538061e-11!GO:0022618;protein-RNA complex assembly;5.88124626538061e-11!GO:0042598;vesicular fraction;8.18632293346818e-11!GO:0005634;nucleus;8.76945301956036e-11!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.31673711147678e-10!GO:0000323;lytic vacuole;1.33801272190988e-10!GO:0005764;lysosome;1.33801272190988e-10!GO:0009057;macromolecule catabolic process;1.77908258603262e-10!GO:0005654;nucleoplasm;2.31046861977807e-10!GO:0005793;ER-Golgi intermediate compartment;4.77153559926772e-10!GO:0002541;activation of plasma proteins during acute inflammatory response;5.39093336763951e-10!GO:0006956;complement activation;5.39093336763951e-10!GO:0003712;transcription cofactor activity;5.39093336763951e-10!GO:0000502;proteasome complex (sensu Eukaryota);6.14565293859583e-10!GO:0008610;lipid biosynthetic process;7.8681124553962e-10!GO:0006066;alcohol metabolic process;8.92572998216858e-10!GO:0043285;biopolymer catabolic process;9.44858835321309e-10!GO:0051246;regulation of protein metabolic process;9.54906407123334e-10!GO:0030964;NADH dehydrogenase complex (quinone);1.53752613940447e-09!GO:0045271;respiratory chain complex I;1.53752613940447e-09!GO:0005747;mitochondrial respiratory chain complex I;1.53752613940447e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.62624288126371e-09!GO:0006631;fatty acid metabolic process;1.8735148301838e-09!GO:0006461;protein complex assembly;2.02052052289033e-09!GO:0048193;Golgi vesicle transport;2.0702340918378e-09!GO:0042775;organelle ATP synthesis coupled electron transport;2.0702340918378e-09!GO:0042773;ATP synthesis coupled electron transport;2.0702340918378e-09!GO:0006958;complement activation, classical pathway;2.09386888661603e-09!GO:0009308;amine metabolic process;2.1371193082848e-09!GO:0015934;large ribosomal subunit;2.16377550823669e-09!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.13718648306148e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.76543631911704e-09!GO:0030163;protein catabolic process;4.40306884110747e-09!GO:0008135;translation factor activity, nucleic acid binding;4.99661128863504e-09!GO:0005768;endosome;5.00636899953281e-09!GO:0050662;coenzyme binding;5.21846482602331e-09!GO:0006520;amino acid metabolic process;6.59302775904463e-09!GO:0002455;humoral immune response mediated by circulating immunoglobulin;7.84350005370344e-09!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;1.07837903640342e-08!GO:0016125;sterol metabolic process;1.28109847010803e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.35025920696064e-08!GO:0006519;amino acid and derivative metabolic process;1.50637272832847e-08!GO:0043069;negative regulation of programmed cell death;1.57278038030358e-08!GO:0044451;nucleoplasm part;1.8524451826499e-08!GO:0043066;negative regulation of apoptosis;1.96770421041622e-08!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;2.85234292297349e-08!GO:0006446;regulation of translational initiation;2.85451059735841e-08!GO:0006913;nucleocytoplasmic transport;4.04407317346973e-08!GO:0016817;hydrolase activity, acting on acid anhydrides;4.44782097105348e-08!GO:0016044;membrane organization and biogenesis;4.46087570788975e-08!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.10452916649362e-08!GO:0005761;mitochondrial ribosome;5.85123768584608e-08!GO:0000313;organellar ribosome;5.85123768584608e-08!GO:0042981;regulation of apoptosis;6.33002693212525e-08!GO:0016462;pyrophosphatase activity;6.33002693212525e-08!GO:0000166;nucleotide binding;6.33002693212525e-08!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;6.35888676064194e-08!GO:0051169;nuclear transport;9.13691392234618e-08!GO:0006996;organelle organization and biogenesis;1.20584807323143e-07!GO:0008203;cholesterol metabolic process;1.24910489047153e-07!GO:0043067;regulation of programmed cell death;1.32333906472688e-07!GO:0031988;membrane-bound vesicle;1.44154561939881e-07!GO:0016564;transcription repressor activity;1.51661463470344e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.54440020416858e-07!GO:0031982;vesicle;1.61774880438207e-07!GO:0017111;nucleoside-triphosphatase activity;1.8706647751043e-07!GO:0015986;ATP synthesis coupled proton transport;2.48776160547329e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.48776160547329e-07!GO:0005777;peroxisome;2.78152501906194e-07!GO:0042579;microbody;2.78152501906194e-07!GO:0006413;translational initiation;3.05850857039676e-07!GO:0008565;protein transporter activity;3.09298728937129e-07!GO:0016023;cytoplasmic membrane-bound vesicle;3.12214547662913e-07!GO:0006916;anti-apoptosis;3.40998406667452e-07!GO:0031410;cytoplasmic vesicle;3.81101111775144e-07!GO:0051187;cofactor catabolic process;4.08896339574326e-07!GO:0003743;translation initiation factor activity;4.67076231281189e-07!GO:0045333;cellular respiration;4.6915646407183e-07!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.7951358527599e-07!GO:0051789;response to protein stimulus;4.84938308779287e-07!GO:0006986;response to unfolded protein;4.84938308779287e-07!GO:0044262;cellular carbohydrate metabolic process;5.96366160855921e-07!GO:0015980;energy derivation by oxidation of organic compounds;8.5466114309472e-07!GO:0007599;hemostasis;8.934113980239e-07!GO:0009060;aerobic respiration;9.46372899607842e-07!GO:0048518;positive regulation of biological process;9.79325450086883e-07!GO:0017038;protein import;1.05216433343813e-06!GO:0030036;actin cytoskeleton organization and biogenesis;1.08941736495403e-06!GO:0006366;transcription from RNA polymerase II promoter;1.13525126449947e-06!GO:0006512;ubiquitin cycle;1.13525126449947e-06!GO:0007596;blood coagulation;1.17487608058753e-06!GO:0005635;nuclear envelope;1.40663506238237e-06!GO:0031324;negative regulation of cellular metabolic process;1.43755377117039e-06!GO:0003714;transcription corepressor activity;1.52842284650391e-06!GO:0010467;gene expression;1.59818278117124e-06!GO:0006752;group transfer coenzyme metabolic process;1.61208364376169e-06!GO:0006954;inflammatory response;1.61208364376169e-06!GO:0002253;activation of immune response;1.61208364376169e-06!GO:0019899;enzyme binding;1.62173432676378e-06!GO:0000398;nuclear mRNA splicing, via spliceosome;1.7337350397524e-06!GO:0000375;RNA splicing, via transesterification reactions;1.7337350397524e-06!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.7337350397524e-06!GO:0016604;nuclear body;1.77809424709295e-06!GO:0019829;cation-transporting ATPase activity;2.04419857323217e-06!GO:0006694;steroid biosynthetic process;2.28580810172533e-06!GO:0006869;lipid transport;2.36142015152839e-06!GO:0009605;response to external stimulus;2.61560219581846e-06!GO:0006099;tricarboxylic acid cycle;2.62501717888319e-06!GO:0046356;acetyl-CoA catabolic process;2.62501717888319e-06!GO:0042060;wound healing;2.95051442054892e-06!GO:0050817;coagulation;3.01854859460974e-06!GO:0042221;response to chemical stimulus;3.28460235474295e-06!GO:0007243;protein kinase cascade;3.61016010184025e-06!GO:0016607;nuclear speck;3.64934977477485e-06!GO:0030029;actin filament-based process;3.87438657012196e-06!GO:0009109;coenzyme catabolic process;4.30765711877539e-06!GO:0008361;regulation of cell size;4.30765711877539e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.34761919846932e-06!GO:0008092;cytoskeletal protein binding;4.43042321440194e-06!GO:0051188;cofactor biosynthetic process;4.7867017930891e-06!GO:0016469;proton-transporting two-sector ATPase complex;4.84695969268524e-06!GO:0016049;cell growth;5.1602493499524e-06!GO:0008639;small protein conjugating enzyme activity;5.48882852791787e-06!GO:0009892;negative regulation of metabolic process;5.5757702189174e-06!GO:0042802;identical protein binding;5.62145798918389e-06!GO:0031252;leading edge;5.90749503690675e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.91073347713312e-06!GO:0006957;complement activation, alternative pathway;7.21703444701074e-06!GO:0006754;ATP biosynthetic process;7.36049265865031e-06!GO:0006753;nucleoside phosphate metabolic process;7.36049265865031e-06!GO:0004842;ubiquitin-protein ligase activity;7.47994478054524e-06!GO:0015078;hydrogen ion transmembrane transporter activity;7.48728127542792e-06!GO:0046034;ATP metabolic process;7.94981638058173e-06!GO:0005788;endoplasmic reticulum lumen;7.94981638058173e-06!GO:0006084;acetyl-CoA metabolic process;7.95514976544669e-06!GO:0005319;lipid transporter activity;8.78961086240266e-06!GO:0001558;regulation of cell growth;9.32105358194103e-06!GO:0006897;endocytosis;9.46377016112172e-06!GO:0010324;membrane invagination;9.46377016112172e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.0011342701866e-05!GO:0005506;iron ion binding;1.04671435593012e-05!GO:0019439;aromatic compound catabolic process;1.31649842734775e-05!GO:0009142;nucleoside triphosphate biosynthetic process;1.35747796973136e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.35747796973136e-05!GO:0044270;nitrogen compound catabolic process;1.40326365557265e-05!GO:0016064;immunoglobulin mediated immune response;1.46319446519148e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.5827785702337e-05!GO:0009144;purine nucleoside triphosphate metabolic process;1.5827785702337e-05!GO:0051170;nuclear import;1.61546394558097e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.71210869183533e-05!GO:0009063;amino acid catabolic process;1.71771955344503e-05!GO:0005770;late endosome;1.9001874625613e-05!GO:0009141;nucleoside triphosphate metabolic process;1.93828632768229e-05!GO:0046983;protein dimerization activity;1.93828632768229e-05!GO:0046483;heterocycle metabolic process;1.95256362936077e-05!GO:0019787;small conjugating protein ligase activity;1.96267609405073e-05!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.01014801549376e-05!GO:0006606;protein import into nucleus;2.11839746700773e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.13429831772496e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.13429831772496e-05!GO:0046930;pore complex;2.27188552375579e-05!GO:0048522;positive regulation of cellular process;2.99831852606721e-05!GO:0000267;cell fraction;3.09271877064654e-05!GO:0005730;nucleolus;3.12503020589335e-05!GO:0003713;transcription coactivator activity;3.16508544358364e-05!GO:0008286;insulin receptor signaling pathway;3.41228102869412e-05!GO:0001666;response to hypoxia;3.65597754406327e-05!GO:0019724;B cell mediated immunity;3.69238493296566e-05!GO:0016126;sterol biosynthetic process;3.83864159560778e-05!GO:0016787;hydrolase activity;3.83976917818492e-05!GO:0009259;ribonucleotide metabolic process;4.0265520623335e-05!GO:0030120;vesicle coat;4.04013605098131e-05!GO:0030662;coated vesicle membrane;4.04013605098131e-05!GO:0048475;coated membrane;4.05068625725956e-05!GO:0030117;membrane coat;4.05068625725956e-05!GO:0017076;purine nucleotide binding;4.19135043562309e-05!GO:0006163;purine nucleotide metabolic process;4.24714313472131e-05!GO:0009310;amine catabolic process;4.72695608210414e-05!GO:0006613;cotranslational protein targeting to membrane;4.91220963702744e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.98927621144626e-05!GO:0001944;vasculature development;5.88356874127975e-05!GO:0009150;purine ribonucleotide metabolic process;7.09141447422419e-05!GO:0009108;coenzyme biosynthetic process;7.24553448741107e-05!GO:0000096;sulfur amino acid metabolic process;7.24553448741107e-05!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;7.38833737761916e-05!GO:0005839;proteasome core complex (sensu Eukaryota);7.49952284557448e-05!GO:0016853;isomerase activity;7.54797572616773e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;8.66341592063964e-05!GO:0051287;NAD binding;9.47670217772802e-05!GO:0031965;nuclear membrane;9.90476094218664e-05!GO:0006695;cholesterol biosynthetic process;0.000101198735860272!GO:0006006;glucose metabolic process;0.000110289425094092!GO:0001568;blood vessel development;0.000116632962333879!GO:0065008;regulation of biological quality;0.000123605175651719!GO:0043412;biopolymer modification;0.000135439709653284!GO:0005624;membrane fraction;0.000142294134671084!GO:0043228;non-membrane-bound organelle;0.000143989553273713!GO:0043232;intracellular non-membrane-bound organelle;0.000143989553273713!GO:0045259;proton-transporting ATP synthase complex;0.000147692230809001!GO:0005791;rough endoplasmic reticulum;0.000149961991066614!GO:0006793;phosphorus metabolic process;0.000151611604095603!GO:0006796;phosphate metabolic process;0.000151611604095603!GO:0019842;vitamin binding;0.00015309844702486!GO:0003779;actin binding;0.000164348597772001!GO:0006164;purine nucleotide biosynthetic process;0.000174056668303044!GO:0016563;transcription activator activity;0.000184315178664911!GO:0044440;endosomal part;0.00019831626339869!GO:0010008;endosome membrane;0.00019831626339869!GO:0043283;biopolymer metabolic process;0.00019831626339869!GO:0016769;transferase activity, transferring nitrogenous groups;0.0001987959468566!GO:0015918;sterol transport;0.000228834873753137!GO:0030301;cholesterol transport;0.000228834873753137!GO:0008652;amino acid biosynthetic process;0.000237328676361885!GO:0030867;rough endoplasmic reticulum membrane;0.000237328676361885!GO:0006464;protein modification process;0.00024295370236915!GO:0006417;regulation of translation;0.000260449234892076!GO:0009260;ribonucleotide biosynthetic process;0.000281063667260278!GO:0003924;GTPase activity;0.000285929512405627!GO:0019318;hexose metabolic process;0.000285929512405627!GO:0009152;purine ribonucleotide biosynthetic process;0.00028597957203817!GO:0005996;monosaccharide metabolic process;0.000296645169282041!GO:0016481;negative regulation of transcription;0.000296645169282041!GO:0010035;response to inorganic substance;0.000308238281647379!GO:0016887;ATPase activity;0.000310919479204744!GO:0005579;membrane attack complex;0.000345506374031107!GO:0006612;protein targeting to membrane;0.000354168403347427!GO:0044431;Golgi apparatus part;0.000380177958746282!GO:0031326;regulation of cellular biosynthetic process;0.000390743333190232!GO:0050789;regulation of biological process;0.000401676062683862!GO:0016881;acid-amino acid ligase activity;0.000408744013876469!GO:0006508;proteolysis;0.000409296542429805!GO:0050878;regulation of body fluid levels;0.000443733477986259!GO:0004298;threonine endopeptidase activity;0.000443733477986259!GO:0040008;regulation of growth;0.000477904313495751!GO:0009889;regulation of biosynthetic process;0.000481809298080723!GO:0032553;ribonucleotide binding;0.000497439457442957!GO:0032555;purine ribonucleotide binding;0.000497439457442957!GO:0006959;humoral immune response;0.000509404590895162!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000531531209528773!GO:0005975;carbohydrate metabolic process;0.000550689891015365!GO:0007264;small GTPase mediated signal transduction;0.000550689891015365!GO:0005525;GTP binding;0.000554443326209939!GO:0022890;inorganic cation transmembrane transporter activity;0.00058382494760119!GO:0008654;phospholipid biosynthetic process;0.000592482238565006!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000604118854280641!GO:0043687;post-translational protein modification;0.000624548224371761!GO:0045786;negative regulation of progression through cell cycle;0.000643307302238113!GO:0048471;perinuclear region of cytoplasm;0.00065665967259529!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000666707907269108!GO:0000097;sulfur amino acid biosynthetic process;0.000710028882626089!GO:0046394;carboxylic acid biosynthetic process;0.00072085407701077!GO:0016053;organic acid biosynthetic process;0.00072085407701077!GO:0008250;oligosaccharyl transferase complex;0.000824225429858963!GO:0006979;response to oxidative stress;0.000841894469928944!GO:0005798;Golgi-associated vesicle;0.000845902280777532!GO:0030133;transport vesicle;0.000879662287784878!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000881440828988825!GO:0009074;aromatic amino acid family catabolic process;0.000916797351880955!GO:0043566;structure-specific DNA binding;0.000943930783967033!GO:0004857;enzyme inhibitor activity;0.00097693106959515!GO:0032446;protein modification by small protein conjugation;0.00100364870004432!GO:0000245;spliceosome assembly;0.00103018552278487!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00104325087356167!GO:0065007;biological regulation;0.00105840106307096!GO:0030139;endocytic vesicle;0.00107384322927903!GO:0005741;mitochondrial outer membrane;0.001081214376421!GO:0044453;nuclear membrane part;0.00109570862264962!GO:0031968;organelle outer membrane;0.00112713605170319!GO:0010033;response to organic substance;0.00119039117585198!GO:0019867;outer membrane;0.00132561377209727!GO:0016567;protein ubiquitination;0.00135688089220163!GO:0004576;oligosaccharyl transferase activity;0.00137826315057501!GO:0042623;ATPase activity, coupled;0.0015261737190225!GO:0030212;hyaluronan metabolic process;0.00163316299172076!GO:0016705;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;0.00165358673833974!GO:0001726;ruffle;0.00169965629189304!GO:0008206;bile acid metabolic process;0.0017607240328113!GO:0030100;regulation of endocytosis;0.00181634601603328!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00182909958965653!GO:0051920;peroxiredoxin activity;0.00183389511426356!GO:0004364;glutathione transferase activity;0.00183629342756263!GO:0016310;phosphorylation;0.00183629342756263!GO:0009719;response to endogenous stimulus;0.00184703692695569!GO:0001525;angiogenesis;0.00186453749645331!GO:0006643;membrane lipid metabolic process;0.00186453749645331!GO:0019395;fatty acid oxidation;0.00188306854223486!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.0020004740769369!GO:0033116;ER-Golgi intermediate compartment membrane;0.00202571924843871!GO:0050794;regulation of cellular process;0.00205771267602672!GO:0006518;peptide metabolic process;0.00206929561381735!GO:0030554;adenyl nucleotide binding;0.0020998465946021!GO:0030532;small nuclear ribonucleoprotein complex;0.00212883295384521!GO:0033673;negative regulation of kinase activity;0.00212916063468055!GO:0006469;negative regulation of protein kinase activity;0.00212916063468055!GO:0048514;blood vessel morphogenesis;0.00212925399902387!GO:0051659;maintenance of mitochondrion localization;0.00213029858200033!GO:0051657;maintenance of organelle localization;0.00213029858200033!GO:0048468;cell development;0.00213105738050597!GO:0016197;endosome transport;0.00220912802542099!GO:0016408;C-acyltransferase activity;0.00230870888782751!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00234003506570717!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.00238353554787801!GO:0045792;negative regulation of cell size;0.00240284892565716!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00240284892565716!GO:0006487;protein amino acid N-linked glycosylation;0.00242959541752166!GO:0006725;aromatic compound metabolic process;0.00250178941080905!GO:0043021;ribonucleoprotein binding;0.00260558705657306!GO:0032561;guanyl ribonucleotide binding;0.00263116193784993!GO:0019001;guanyl nucleotide binding;0.00263116193784993!GO:0005774;vacuolar membrane;0.00264629742184456!GO:0019843;rRNA binding;0.00274903492285597!GO:0008483;transaminase activity;0.00277871322760004!GO:0030308;negative regulation of cell growth;0.00279277786510987!GO:0051427;hormone receptor binding;0.00285382922418954!GO:0019838;growth factor binding;0.00294021500073357!GO:0005885;Arp2/3 protein complex;0.00298920330984298!GO:0050657;nucleic acid transport;0.003005378616175!GO:0051236;establishment of RNA localization;0.003005378616175!GO:0050658;RNA transport;0.003005378616175!GO:0006558;L-phenylalanine metabolic process;0.00317074685625151!GO:0006559;L-phenylalanine catabolic process;0.00317074685625151!GO:0009069;serine family amino acid metabolic process;0.00317074685625151!GO:0006635;fatty acid beta-oxidation;0.00327100137599813!GO:0055088;lipid homeostasis;0.00330459854402851!GO:0051270;regulation of cell motility;0.00332028469254655!GO:0016860;intramolecular oxidoreductase activity;0.00332293983204084!GO:0005159;insulin-like growth factor receptor binding;0.00344010339235183!GO:0005643;nuclear pore;0.00344438186998749!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00344438186998749!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00344438186998749!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00344438186998749!GO:0031960;response to corticosteroid stimulus;0.0034698518334515!GO:0006953;acute-phase response;0.00348837703985367!GO:0005762;mitochondrial large ribosomal subunit;0.00359484804186473!GO:0000315;organellar large ribosomal subunit;0.00359484804186473!GO:0006403;RNA localization;0.00372895084108567!GO:0003690;double-stranded DNA binding;0.0037545979691502!GO:0016829;lyase activity;0.0037566326607574!GO:0045892;negative regulation of transcription, DNA-dependent;0.0037871694115743!GO:0010038;response to metal ion;0.0038054177818482!GO:0030027;lamellipodium;0.0038054177818482!GO:0000151;ubiquitin ligase complex;0.00385780480756596!GO:0044242;cellular lipid catabolic process;0.00393280326193482!GO:0016859;cis-trans isomerase activity;0.00429014125002474!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00439216480798021!GO:0002449;lymphocyte mediated immunity;0.00439544084702583!GO:0009966;regulation of signal transduction;0.00445982166635498!GO:0006693;prostaglandin metabolic process;0.00451855571520019!GO:0006692;prostanoid metabolic process;0.00451855571520019!GO:0051348;negative regulation of transferase activity;0.00454463925783499!GO:0035257;nuclear hormone receptor binding;0.00467694326495799!GO:0000139;Golgi membrane;0.00468146133001633!GO:0003724;RNA helicase activity;0.00478020085393239!GO:0045454;cell redox homeostasis;0.0047993280647527!GO:0018196;peptidyl-asparagine modification;0.00500413733810898!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00500413733810898!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.00506517465545491!GO:0004300;enoyl-CoA hydratase activity;0.00537083648179923!GO:0007005;mitochondrion organization and biogenesis;0.00548628138830255!GO:0002684;positive regulation of immune system process;0.00565860030260707!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00585953187666451!GO:0002250;adaptive immune response;0.00592715652462666!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.00592715652462666!GO:0005577;fibrinogen complex;0.00620252262725298!GO:0006644;phospholipid metabolic process;0.00627598892131901!GO:0016740;transferase activity;0.0064551445951466!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00657947324539667!GO:0009725;response to hormone stimulus;0.00706249476085666!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00706898909400804!GO:0065009;regulation of a molecular function;0.00709946251359662!GO:0030218;erythrocyte differentiation;0.00754336980818144!GO:0051540;metal cluster binding;0.00783432122870037!GO:0051536;iron-sulfur cluster binding;0.00783432122870037!GO:0006790;sulfur metabolic process;0.00788118634238816!GO:0005769;early endosome;0.00800420219678626!GO:0048500;signal recognition particle;0.00810007284754469!GO:0030118;clathrin coat;0.00813634271888163!GO:0051235;maintenance of localization;0.00820150404280587!GO:0005905;coated pit;0.00825374253080085!GO:0003697;single-stranded DNA binding;0.00851233795249572!GO:0050778;positive regulation of immune response;0.00919171010661004!GO:0006650;glycerophospholipid metabolic process;0.00924649869992426!GO:0051087;chaperone binding;0.00930177969100216!GO:0019210;kinase inhibitor activity;0.00930177969100216!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00930177969100216!GO:0004812;aminoacyl-tRNA ligase activity;0.00930177969100216!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00930177969100216!GO:0009967;positive regulation of signal transduction;0.00946773417347671!GO:0051384;response to glucocorticoid stimulus;0.00961214923159277!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00961214923159277!GO:0015399;primary active transmembrane transporter activity;0.00961214923159277!GO:0065002;intracellular protein transport across a membrane;0.0098725191592826!GO:0043623;cellular protein complex assembly;0.00987272282064881!GO:0006879;cellular iron ion homeostasis;0.010052026451469!GO:0055072;iron ion homeostasis;0.010052026451469!GO:0009081;branched chain family amino acid metabolic process;0.010052026451469!GO:0051179;localization;0.0102136688575429!GO:0042157;lipoprotein metabolic process;0.0102397169989504!GO:0008209;androgen metabolic process;0.0103557283290245!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.010458633827516!GO:0030132;clathrin coat of coated pit;0.0105095814231935!GO:0002682;regulation of immune system process;0.010666557151135!GO:0045926;negative regulation of growth;0.0109558236281659!GO:0044437;vacuolar part;0.0110151913656994!GO:0000314;organellar small ribosomal subunit;0.0111229778271691!GO:0005763;mitochondrial small ribosomal subunit;0.0111229778271691!GO:0030134;ER to Golgi transport vesicle;0.0112574244002657!GO:0006767;water-soluble vitamin metabolic process;0.0114093371282745!GO:0002443;leukocyte mediated immunity;0.0117059949044654!GO:0051101;regulation of DNA binding;0.0117157055128143!GO:0051128;regulation of cellular component organization and biogenesis;0.0117157055128143!GO:0050660;FAD binding;0.0119181437342861!GO:0008047;enzyme activator activity;0.0119866548617527!GO:0006525;arginine metabolic process;0.0122174483988261!GO:0007040;lysosome organization and biogenesis;0.0122174483988261!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0123118416343057!GO:0005524;ATP binding;0.0124687565304165!GO:0009991;response to extracellular stimulus;0.0128725192843435!GO:0030041;actin filament polymerization;0.0131646413908124!GO:0040011;locomotion;0.013303004070834!GO:0043038;amino acid activation;0.013303004070834!GO:0006418;tRNA aminoacylation for protein translation;0.013303004070834!GO:0043039;tRNA aminoacylation;0.013303004070834!GO:0005083;small GTPase regulator activity;0.0133219649402555!GO:0030127;COPII vesicle coat;0.0135458369524867!GO:0012507;ER to Golgi transport vesicle membrane;0.0135458369524867!GO:0051252;regulation of RNA metabolic process;0.0136239153375868!GO:0004860;protein kinase inhibitor activity;0.0136845954955533!GO:0051248;negative regulation of protein metabolic process;0.0138153687962963!GO:0040012;regulation of locomotion;0.0140603339450514!GO:0032559;adenyl ribonucleotide binding;0.0145034588730701!GO:0002252;immune effector process;0.0145355970790357!GO:0009117;nucleotide metabolic process;0.0145997945177297!GO:0015036;disulfide oxidoreductase activity;0.0146609758737128!GO:0005667;transcription factor complex;0.0146952281757446!GO:0006572;tyrosine catabolic process;0.014701009436804!GO:0008154;actin polymerization and/or depolymerization;0.01499827297493!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.015099242739623!GO:0045047;protein targeting to ER;0.015099242739623!GO:0043492;ATPase activity, coupled to movement of substances;0.015325104140855!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0153716211640741!GO:0015002;heme-copper terminal oxidase activity;0.0153716211640741!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0153716211640741!GO:0004129;cytochrome-c oxidase activity;0.0153716211640741!GO:0043284;biopolymer biosynthetic process;0.0153716211640741!GO:0006706;steroid catabolic process;0.0155839766025483!GO:0031589;cell-substrate adhesion;0.0156819928552587!GO:0031667;response to nutrient levels;0.0157684333490396!GO:0005765;lysosomal membrane;0.0158339325145785!GO:0004029;aldehyde dehydrogenase (NAD) activity;0.015924115760296!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0162049269964072!GO:0016791;phosphoric monoester hydrolase activity;0.0162049269964072!GO:0055092;sterol homeostasis;0.0164787952016556!GO:0042632;cholesterol homeostasis;0.0164787952016556!GO:0045893;positive regulation of transcription, DNA-dependent;0.0165990621936419!GO:0004177;aminopeptidase activity;0.0167040456159107!GO:0007050;cell cycle arrest;0.0169268255931579!GO:0008186;RNA-dependent ATPase activity;0.0169268255931579!GO:0030170;pyridoxal phosphate binding;0.0169327883616943!GO:0006259;DNA metabolic process;0.0170099966504355!GO:0006633;fatty acid biosynthetic process;0.0170921206276471!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0173938152767486!GO:0007265;Ras protein signal transduction;0.017515322718679!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0175529353144701!GO:0051028;mRNA transport;0.0175995762655424!GO:0046364;monosaccharide biosynthetic process;0.0185213811334391!GO:0046165;alcohol biosynthetic process;0.0185213811334391!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.018570388753903!GO:0035258;steroid hormone receptor binding;0.0185952842048151!GO:0051674;localization of cell;0.0186628838204862!GO:0006928;cell motility;0.0186628838204862!GO:0043488;regulation of mRNA stability;0.0186973021123568!GO:0043487;regulation of RNA stability;0.0186973021123568!GO:0031072;heat shock protein binding;0.0188553882333598!GO:0000074;regulation of progression through cell cycle;0.0190779866405784!GO:0017166;vinculin binding;0.0192382406690733!GO:0006702;androgen biosynthetic process;0.0192387938950695!GO:0051726;regulation of cell cycle;0.0192387938950695!GO:0048659;smooth muscle cell proliferation;0.0192399917073786!GO:0006778;porphyrin metabolic process;0.0194022927521873!GO:0033013;tetrapyrrole metabolic process;0.0194022927521873!GO:0051591;response to cAMP;0.019631285222829!GO:0051168;nuclear export;0.019960615233976!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0204596339798453!GO:0050811;GABA receptor binding;0.020845450764561!GO:0016709;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen;0.0209421995337807!GO:0006402;mRNA catabolic process;0.0214691238975259!GO:0007162;negative regulation of cell adhesion;0.0215254193046965!GO:0008201;heparin binding;0.0216615832517541!GO:0001887;selenium metabolic process;0.021667246780369!GO:0042627;chylomicron;0.0216990083292611!GO:0031327;negative regulation of cellular biosynthetic process;0.0217222378176919!GO:0016712;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen;0.0217617331424088!GO:0005520;insulin-like growth factor binding;0.0221639347970595!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0222990133507016!GO:0030658;transport vesicle membrane;0.0226988689338131!GO:0015923;mannosidase activity;0.0228398795039155!GO:0008026;ATP-dependent helicase activity;0.022906084211644!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0231994094662253!GO:0043681;protein import into mitochondrion;0.0232769873929283!GO:0042803;protein homodimerization activity;0.0239542350324993!GO:0048487;beta-tubulin binding;0.0239814234787019!GO:0042026;protein refolding;0.0241014683322376!GO:0007033;vacuole organization and biogenesis;0.0241781116599259!GO:0043065;positive regulation of apoptosis;0.0242392915796742!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0242392915796742!GO:0003746;translation elongation factor activity;0.024483024948591!GO:0009066;aspartate family amino acid metabolic process;0.0246135550047556!GO:0045637;regulation of myeloid cell differentiation;0.0246705998003861!GO:0019904;protein domain specific binding;0.0248848722495216!GO:0050776;regulation of immune response;0.0249186494067095!GO:0008312;7S RNA binding;0.0249393282867836!GO:0016836;hydro-lyase activity;0.025550088727795!GO:0030193;regulation of blood coagulation;0.026398106455112!GO:0050749;apolipoprotein E receptor binding;0.0264963492640664!GO:0004197;cysteine-type endopeptidase activity;0.0264963492640664!GO:0007160;cell-matrix adhesion;0.0265059200790661!GO:0003729;mRNA binding;0.0267075123802626!GO:0000041;transition metal ion transport;0.0267115992083533!GO:0046467;membrane lipid biosynthetic process;0.0268486791087885!GO:0030518;steroid hormone receptor signaling pathway;0.026918745027006!GO:0006090;pyruvate metabolic process;0.0270333878077421!GO:0005048;signal sequence binding;0.0270716058819878!GO:0030119;AP-type membrane coat adaptor complex;0.0271471445734578!GO:0050748;negative regulation of lipoprotein metabolic process;0.0274031696789752!GO:0008234;cysteine-type peptidase activity;0.0278568481323588!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0280940596816695!GO:0046904;calcium oxalate binding;0.0285753928063461!GO:0030568;plasmin inhibitor activity;0.0285753928063461!GO:0031902;late endosome membrane;0.0287902515765401!GO:0042168;heme metabolic process;0.0294018446037128!GO:0048646;anatomical structure formation;0.0294212535521512!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0295344220296051!GO:0016877;ligase activity, forming carbon-sulfur bonds;0.0297075968078685!GO:0006607;NLS-bearing substrate import into nucleus;0.0297291981038396!GO:0019319;hexose biosynthetic process;0.0301487307118069!GO:0007242;intracellular signaling cascade;0.0306257259836893!GO:0015682;ferric iron transport;0.0307232265506591!GO:0015091;ferric iron transmembrane transporter activity;0.0307232265506591!GO:0031643;positive regulation of myelination;0.0307232265506591!GO:0006081;aldehyde metabolic process;0.030970272695179!GO:0033344;cholesterol efflux;0.0313845281247535!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0316628023566262!GO:0003995;acyl-CoA dehydrogenase activity;0.0317353672132285!GO:0030131;clathrin adaptor complex;0.0317473707819535!GO:0006414;translational elongation;0.0319569168329586!GO:0051346;negative regulation of hydrolase activity;0.0320481480659295!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0324271180221146!GO:0051098;regulation of binding;0.0324635032672969!GO:0007010;cytoskeleton organization and biogenesis;0.0336479644612507!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.0338870904215323!GO:0043068;positive regulation of programmed cell death;0.0349239500875443!GO:0051539;4 iron, 4 sulfur cluster binding;0.0349239500875443!GO:0005938;cell cortex;0.0353406052325334!GO:0006595;polyamine metabolic process;0.0359213283350478!GO:0003702;RNA polymerase II transcription factor activity;0.0363266883432793!GO:0046686;response to cadmium ion;0.0368899312838371!GO:0016746;transferase activity, transferring acyl groups;0.0370372767351477!GO:0030176;integral to endoplasmic reticulum membrane;0.0370372767351477!GO:0016229;steroid dehydrogenase activity;0.0372264268863341!GO:0003756;protein disulfide isomerase activity;0.0372264268863341!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0372264268863341!GO:0004004;ATP-dependent RNA helicase activity;0.0373538890992796!GO:0001889;liver development;0.0375718680985454!GO:0030155;regulation of cell adhesion;0.0377171413194423!GO:0004386;helicase activity;0.0377588704506311!GO:0042254;ribosome biogenesis and assembly;0.0379847917564792!GO:0046395;carboxylic acid catabolic process;0.0382389703845013!GO:0016054;organic acid catabolic process;0.0382389703845013!GO:0030569;chymotrypsin inhibitor activity;0.0382389703845013!GO:0051271;negative regulation of cell motility;0.0385710421964322!GO:0006749;glutathione metabolic process;0.0385899290377601!GO:0043433;negative regulation of transcription factor activity;0.0392364433918146!GO:0030695;GTPase regulator activity;0.0392533632788218!GO:0006509;membrane protein ectodomain proteolysis;0.0392974209725094!GO:0033619;membrane protein proteolysis;0.0392974209725094!GO:0051537;2 iron, 2 sulfur cluster binding;0.0394483176792962!GO:0050818;regulation of coagulation;0.0396279502216662!GO:0000050;urea cycle;0.0397373600771518!GO:0043603;amide metabolic process;0.0397373600771518!GO:0019627;urea metabolic process;0.0397373600771518!GO:0008430;selenium binding;0.0398489317396233!GO:0009890;negative regulation of biosynthetic process;0.0399722424392336!GO:0051049;regulation of transport;0.0400419207346681!GO:0016747;transferase activity, transferring groups other than amino-acyl groups;0.0400419207346681!GO:0008139;nuclear localization sequence binding;0.0401092046654037!GO:0006892;post-Golgi vesicle-mediated transport;0.0404258360198008!GO:0000060;protein import into nucleus, translocation;0.0404258360198008!GO:0007049;cell cycle;0.0406208370173933!GO:0043086;negative regulation of catalytic activity;0.0411702618689316!GO:0004185;serine carboxypeptidase activity;0.0411898705182891!GO:0006007;glucose catabolic process;0.0422575901058419!GO:0006818;hydrogen transport;0.0424795401328847!GO:0006891;intra-Golgi vesicle-mediated transport;0.0426133233971517!GO:0004563;beta-N-acetylhexosaminidase activity;0.0428053179952504!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0428053179952504!GO:0001725;stress fiber;0.0428192404090304!GO:0032432;actin filament bundle;0.0428192404090304!GO:0045941;positive regulation of transcription;0.0436002069855221!GO:0009607;response to biotic stimulus;0.0436506174312004!GO:0016721;oxidoreductase activity, acting on superoxide radicals as acceptor;0.0436506174312004!GO:0004784;superoxide dismutase activity;0.0436506174312004!GO:0009064;glutamine family amino acid metabolic process;0.0441804415447683!GO:0006094;gluconeogenesis;0.0443882411289805!GO:0015629;actin cytoskeleton;0.0443882411289805!GO:0035035;histone acetyltransferase binding;0.0445458242138249!GO:0042558;pteridine and derivative metabolic process;0.0458276738991501!GO:0008283;cell proliferation;0.045835457091076!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0458462274233892!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0458462274233892!GO:0008147;structural constituent of bone;0.0458462274233892!GO:0007034;vacuolar transport;0.0458462274233892!GO:0006534;cysteine metabolic process;0.0460164651867364!GO:0030663;COPI coated vesicle membrane;0.0462240127059657!GO:0030126;COPI vesicle coat;0.0462240127059657!GO:0016568;chromatin modification;0.0478446925167803!GO:0030235;nitric-oxide synthase regulator activity;0.0480892539850115!GO:0005099;Ras GTPase activator activity;0.048264283067253!GO:0000062;acyl-CoA binding;0.0483957482061263!GO:0006658;phosphatidylserine metabolic process;0.0485599444973393!GO:0044438;microbody part;0.0485599444973393!GO:0044439;peroxisomal part;0.0485599444973393!GO:0005096;GTPase activator activity;0.0492743998656328!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0495414244425057!GO:0006642;triacylglycerol mobilization;0.0496589872155483!GO:0045646;regulation of erythrocyte differentiation;0.0497520198885502!GO:0006563;L-serine metabolic process;0.0498809862106637
|sample_id=10004
|sample_id=10004
|sample_note=
|sample_note=
|sample_sex=unknown
|sample_sex=unknown
|sample_species=Chicken (Gallus gallus)
|sample_species=Gallus gallus
|sample_strain=
|sample_strain=
|sample_tissue=whole body
|sample_tissue=whole body
|top_motifs=
|top_motifs=
|xref=
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_chicken;search_select_hide=table111:FF:10004-101A9;search_select_hide=table117:FF:10004-101A9
|zoo_library_id=SRhi10006.GGCTAC!SRhi10007.GGTAGC
}}
}}

Latest revision as of 09:37, 5 June 2020


Name:chicken embryo whole body, day10 (HH37)
Species:Gallus gallus
Library ID:CNhs10485
Sample type:tissues
ZENBU report :link
Additional information
Sample information
strainNA
tissuewhole body
dev stage10 days embryo
sexunknown
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyNA
collaborationGuojun Sheng (RIKEN CDB)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
chicken_CAGE  SAMD00053745
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10485 chicken_CAGE DRX057267 DRR063026
chicken_sRNA DRX163585 DRR172974
chicken_sRNA DRX163586 DRR172975
Accession ID

Library idBAMCTSS
CNhs10485 DRZ007521 DRZ00755375
DRZ014421
DRZ014422
Accession ID

Library idBAMCTSS
CNhs10485 DRZ014422

sRNA Accession numbers
MethodSample accession id
chicken_sRNA  SAMD00053745
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10006.GGCTAC chicken_sRNA DRX163585 DRR172974
SRhi10007.GGTAGC chicken_sRNA DRX163586 DRR172975
Accession ID

Library idBAMCTSS
SRhi10006.GGCTAC DRZ014421
SRhi10007.GGTAGC DRZ014422



FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000032 (chicken sample)
0000001 (sample)
0000004 (tissue sample)
0000649 (10 days sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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