UBERON:0010913: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=Note that Uberon includes a distinct subclass for bony vertebra | |comment=Note that Uberon includes a distinct subclass for bony vertebra | ||
|created_by= | |created_by= | ||
| | |def="Skeletal element that forms around the notochord and is part of the vertebral column." [VSAO:0000184] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from=UBERON:0003089 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0010913 | |||
|is_a=UBERON:0004120 ;;UBERON:0004765 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=vertebral element | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0001130 | |part_of=UBERON:0001130 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref=VHOG:0001143;;VSAO:0000184 | |||
}} | }} | ||
Latest revision as of 18:10, 12 September 2014
| Name: | vertebral element | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Skeletal element that forms around the notochord and is part of the vertebral column." [VSAO:0000184] | ||
| Xrefs: |
| ||
| Comments: | Note that Uberon includes a distinct subclass for bony vertebra |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004120(mesoderm-derived structure),UBERON:0004765(skeletal element) |
|---|---|
| develops_from: | UBERON:0003089(sclerotome) |
| part_of: | UBERON:0001130(vertebral column) |
Children
| is a: | UBERON:0002412 (vertebra),UBERON:0011094 (vertebra cartilage element) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11219-116B4 (Mesenchymal Stem Cells - Vertebral, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010913 (vertebral element), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
